Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Octopus_20bimaculoides_20[refseq_20GCF_5F001194135.1_202015-08-18] 151,674 sequences; 2,338,188,782 total letters Query= NC_028112.1 Length=178262 Score E Sequences producing significant alignments: (Bits) Value seq15337 149 7e-31 seq139616 104 3e-17 seq2214 104 3e-17 >seq15337 Length=1015838 Score = 149 bits (164), Expect = 7e-31 Identities = 159/210 (76%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464 ||||||||| ||||| || || || || || ||||| |||||| | ||||| || | Sbjct 838844 AATGCAAATTTTTGTAAAAACACTGACGGGAAAGACCATTACTTTGGAGGTGGAACCGTC 838903 Query 27465 TGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCA 27524 ||||| |||| |||| | ||||| || || || ||||| || || ||||||||||| || Sbjct 838904 TGATACAATTGAAAATGTAAAGGCAAAGATCCAAGACAAAGAAGGTATTCCTCCAGATCA 838963 Query 27525 GCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAA 27584 |||||| | |||||||| || || || | || |||| ||||||||| |||| || || Sbjct 838964 ACAGCGTTTGATTTTTGCAGGGAAACAGTTGGAAGATGGTCGTACCCTCTCAGATTACAA 839023 Query 27585 TGTCCAAAAGGAATCCACTCTTCATCTAGT 27614 | |||| || ||||| || || ||||| || Sbjct 839024 TATCCAGAAAGAATCTACCCTCCATCTTGT 839053 Score = 143 bits (158), Expect = 3e-29 Identities = 157/209 (75%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 |||||||| ||||| || || ||||| || || || || || | || || || | Sbjct 840899 ATGCAAATTTTTGTGAAAACACTTACAGGAAAAACCATCACATTGGAAGTAGAACCTTCA 840958 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 |||| ||||| |||| | ||||| || || || ||||| || || ||||||||||| || Sbjct 840959 GATACCATTGAAAATGTAAAGGCAAAGATCCAAGACAAAGAAGGTATTCCTCCAGATCAA 841018 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 |||||||| |||||||| || || || || || |||| |||||| || |||| || ||| Sbjct 841019 CAGCGTCTGATTTTTGCAGGGAAACAGCTGGAAGATGGTCGTACTCTCTCAGATTACAAT 841078 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGT 27614 |||| || ||||| || |||||||| || Sbjct 841079 ATCCAGAAAGAATCTACCCTTCATCTTGT 841107 Score = 134 bits (148), Expect = 2e-26 Identities = 166/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 |||||||| ||||| || || ||||| || || || || || | || || || | Sbjct 840443 ATGCAAATTTTTGTAAAAACACTTACAGGAAAAACCATCACATTGGAAGTAGAACCTTCC 840502 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | |||| |||| | || || |||||||| ||||| || || ||||||||||| || Sbjct 840503 GACACTATTGAAAATGTAAAAGCCAAAATTCAAGACAAAGAAGGTATTCCTCCAGATCAA 840562 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 |||||||| |||||||| || || || | || |||| |||||| || |||| || ||| Sbjct 840563 CAGCGTCTGATTTTTGCAGGGAAACAGTTGGAAGATGGTCGTACTCTCTCAGATTACAAT 840622 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 |||| || ||||| ||||| ||||| || | || || | ||||| Sbjct 840623 ATCCAGAAAGAATCAACTCTCCATCTTGTACTCCGACTAAGAGGTGG 840669 Score = 113 bits (124), Expect = 5e-20 Identities = 125/167 (75%), Gaps = 0/167 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 |||||||| ||||| || || ||||| || || || || || | || || || | Sbjct 839073 ATGCAAATTTTTGTGAAAACACTTACAGGAAAAACCATCACATTGGAAGTAGAACCTTCA 839132 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 |||| ||||| |||| | ||||| || || || ||||| || || ||||||||||| || Sbjct 839133 GATACCATTGAAAATGTAAAGGCAAAGATCCAAGACAAAGAAGGTATTCCTCCAGATCAA 839192 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCT 27572 |||||||| |||||||| || || || || || |||| |||||| || Sbjct 839193 CAGCGTCTGATTTTTGCAGGGAAACAGCTGGAAGATGGTCGTACTCT 839239 >seq139616 Length=94208 Score = 104 bits (114), Expect = 3e-17 Identities = 98/125 (78%), Gaps = 0/125 (0%) Strand=Plus/Plus Query 32125 ACCATTGTCAACCTTGCTCAGAACTTTGTCGGTGCAAATAACCTGAACTTACTCGAGCCA 32184 || ||| ||||| | || ||||||||||| ||| |||| ||| | |||||||| ||| Sbjct 65221 ACAATTATCAACTTAGCCCAGAACTTTGTTGGTTCAAACAACATAAACTTACTGCTGCCC 65280 Query 32185 TCTGGACAGTTTGGGACCCGGCTCGCCGGTGGCAAGGATGCTGCGAGCTCCCGTTACATC 32244 ||| |||||||| |||||| | |||||||| |||||||| ||| ||||||| ||| Sbjct 65281 ATTGGTCAGTTTGGAACCCGGTTACATGGTGGCAAAGATGCTGCCAGCCCCCGTTATATC 65340 Query 32245 TTCAC 32249 ||||| Sbjct 65341 TTCAC 65345 >seq2214 Length=644335 Score = 104 bits (114), Expect = 3e-17 Identities = 98/125 (78%), Gaps = 0/125 (0%) Strand=Plus/Plus Query 27508 GGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGT 27567 |||||||||||||| ||||| | | || ||||||||||||||||| ||||||| ||| Sbjct 547292 GGAATTCCTCCAGATCAGCAAAGATTGATCTTTGCTGGTAAGCAACTTGAGGATGGCCGT 547351 Query 27568 ACCCTAGCAGACTATAATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGC 27627 || || ||||||| || | |||||||| || || |||||| | ||| | ||| | || Sbjct 547352 ACGCTGTCAGACTACAACATTCAAAAGGAGTCAACCCTTCATTTGGTCCTTCGTTTGCGA 547411 Query 27628 GGTGG 27632 ||||| Sbjct 547412 GGTGG 547416 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 569229134254880