Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Octopus_20bimaculoides_20[refseq_20GCF_5F001194135.1_202015-08-18] 151,674 sequences; 2,338,188,782 total letters Query= NC_029304.1 Length=111246 Score E Sequences producing significant alignments: (Bits) Value seq15337 84.2 2e-11 >seq15337 Length=1015838 Score = 84.2 bits (92), Expect = 2e-11 Identities = 133/191 (70%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 27790 ATGCAAATTTTTGTGAAAACTCTTACTGGGAAATGTATTACAATTGATGTCGAAAGCACC 27849 |||||||||||||||||||| ||||| || ||| || ||| | || || ||| || Sbjct 840215 ATGCAAATTTTTGTGAAAACACTTACAGGAAAAACCATCACATTGGAAGTAGAACCTTCC 840274 Query 27850 GACGATGTACAATCGGTCAAACAAAAAATAGCCGACAAAGAAGGTGTTCCGATGGAGCAG 27909 ||| | | || || ||| ||||| |||||||||||| |||| || || Sbjct 840275 GACACTATTGAAAATGTAAAAGCCAAAATTCAAGACAAAGAAGGTATTCCCCCAGATCAA 840334 Query 27910 CAACGGTTAATTTTTGCCGGAAAACAATTGGACGACGAACGCAGCTTGTCCGATTACAAC 27969 || || | |||||||| || ||||| |||| || | || | | || |||||||| Sbjct 840335 CAGCGTCTGATTTTTGCAGGGAAACAGCTGGAAGATGGTCGTACTCTCTCGGATTACAAT 840394 Query 27970 ATCCAAAAAGA 27980 ||||| ||||| Sbjct 840395 ATCCAGAAAGA 840405 Score = 84.2 bits (92), Expect = 2e-11 Identities = 133/191 (70%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 27790 ATGCAAATTTTTGTGAAAACTCTTACTGGGAAATGTATTACAATTGATGTCGAAAGCACC 27849 |||||||||||||| ||||| ||||| || ||| || ||| | || || ||| || Sbjct 840443 ATGCAAATTTTTGTAAAAACACTTACAGGAAAAACCATCACATTGGAAGTAGAACCTTCC 840502 Query 27850 GACGATGTACAATCGGTCAAACAAAAAATAGCCGACAAAGAAGGTGTTCCGATGGAGCAG 27909 ||| | | || || ||| ||||| |||||||||||| |||| || || Sbjct 840503 GACACTATTGAAAATGTAAAAGCCAAAATTCAAGACAAAGAAGGTATTCCTCCAGATCAA 840562 Query 27910 CAACGGTTAATTTTTGCCGGAAAACAATTGGACGACGAACGCAGCTTGTCCGATTACAAC 27969 || || | |||||||| || ||||| ||||| || | || | | || |||||||| Sbjct 840563 CAGCGTCTGATTTTTGCAGGGAAACAGTTGGAAGATGGTCGTACTCTCTCAGATTACAAT 840622 Query 27970 ATCCAAAAAGA 27980 ||||| ||||| Sbjct 840623 ATCCAGAAAGA 840633 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 355204578789798