Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Octopus_20bimaculoides_20[refseq_20GCF_5F001194135.1_202015-08-18] 151,674 sequences; 2,338,188,782 total letters Query= NC_029692.1 Length=362276 Score E Sequences producing significant alignments: (Bits) Value seq15337 154 3e-32 >seq15337 Length=1015838 Score = 154 bits (170), Expect = 3e-32 Identities = 163/215 (76%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 || ||||| || || || || ||||| ||||| || ||||| | ||||| | |||||| Sbjct 839056 AGTACAAGATGGAGGGTAGATTCTTTCTGGATATTGTAATCTGAGAGGGTACGACCATCT 838997 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 |||| ||| || ||||| || || | || ||||| || ||||||| ||||| ||||| Sbjct 838996 TCCAACTGTTTCCCTGCAAAAATCAAACGCTGTTGATCTGGAGGAATACCTTCTTTGTCT 838937 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 ||||||||| || || ||||| || || ||||| ||| ||||| | ||| || ||| Sbjct 838936 TGGATCTTTGCCTTTACATTTTCAATTGTATCAGACGGTTCCACCTCCAAAGTAATGGTC 838877 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCATTTT 211117 |||||||| || || |||||||| | |||||||| Sbjct 838876 TTTCCCGTCAGTGTTTTTACAAAAATTTGCATTTT 838842 Score = 140 bits (154), Expect = 8e-28 Identities = 158/212 (75%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 || ||||| ||||| || || ||||| ||||| || ||||| | || || | |||||| Sbjct 841110 AGTACAAGATGAAGGGTAGATTCTTTCTGGATATTGTAATCTGAGAGAGTACGACCATCT 841051 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 |||||||| || ||||| || || || || ||||| || ||||||| ||||| ||||| Sbjct 841050 TCCAGCTGTTTCCCTGCAAAAATCAGACGCTGTTGATCTGGAGGAATACCTTCTTTGTCT 840991 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 ||||||||| || || ||||| ||||| || || ||| || || | ||||| || Sbjct 840990 TGGATCTTTGCCTTTACATTTTCAATGGTATCTGAAGGTTCTACTTCCAATGTGATGGTT 840931 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 ||||| || || || || ||||| | ||||| Sbjct 840930 TTTCCTGTAAGTGTTTTCACAAAAATTTGCAT 840899 Score = 132 bits (146), Expect = 1e-25 Identities = 160/218 (73%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 210897 AGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTT 210956 |||| || ||||| || ||||| || ||||| ||||| || ||||||| || || | Sbjct 840432 AGTCGGAGTACAAGATGGAGAGTAGATTCTTTCTGGATATTGTAATCCGAGAGAGTACGA 840373 Query 210957 CCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCC 211016 |||||||||||||| || ||||| || || || || ||||| || || |||| ||||| Sbjct 840372 CCATCTTCCAGCTGTTTCCCTGCAAAAATCAGACGCTGTTGATCTGGGGGAATACCTTCT 840313 Query 211017 TTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTG 211076 ||||| || || || ||| || ||||| || ||||| || ||| || || | ||| Sbjct 840312 TTGTCTTGAATTTTGGCTTTTACATTTTCAATAGTGTCGGAAGGTTCTACTTCCAATGTG 840253 Query 211077 ATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || || ||||| || || || || ||||| | ||||| Sbjct 840252 ATGGTTTTTCCTGTAAGTGTTTTCACAAAAATTTGCAT 840215 Score = 132 bits (146), Expect = 1e-25 Identities = 160/218 (73%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 210897 AGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTT 210956 |||| || ||||| || || || || ||||| ||||| || ||||| | || || | Sbjct 840888 AGTCGAAGTACAAGATGGAGGGTAGATTCTTTCTGGATATTGTAATCTGAGAGAGTACGA 840829 Query 210957 CCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCC 211016 |||||||||||||| || ||||| || || || |||||||| || || |||| ||||| Sbjct 840828 CCATCTTCCAGCTGTTTTCCTGCAAAAATCAGACGTTGTTGATCTGGGGGAATACCTTCT 840769 Query 211017 TTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTG 211076 ||||| || || || ||| || ||||| ||||| || || || || || | ||| Sbjct 840768 TTGTCTTGAATTTTGGCTTTTACATTTTCAATGGTATCTGAAGGCTCTACTTCCAATGTG 840709 Query 211077 ATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || || ||||| ||||| || |||||||| | ||||| Sbjct 840708 ATGGTTTTTCCTGTGAGTGTTTTTACAAAAATTTGCAT 840671 Score = 109 bits (120), Expect = 1e-18 Identities = 119/158 (75%), Gaps = 0/158 (0%) Strand=Plus/Minus Query 210957 CCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCC 211016 |||||||||||||| || ||||| || || || || ||||| || ||||||| ||||| Sbjct 839230 CCATCTTCCAGCTGTTTCCCTGCAAAAATCAGACGCTGTTGATCTGGAGGAATACCTTCT 839171 Query 211017 TTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTG 211076 ||||| ||||||||| || || ||||| ||||| || || ||| || || | ||| Sbjct 839170 TTGTCTTGGATCTTTGCCTTTACATTTTCAATGGTATCTGAAGGTTCTACTTCCAATGTG 839111 Query 211077 ATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || || ||||| || || || || ||||| | ||||| Sbjct 839110 ATGGTTTTTCCTGTAAGTGTTTTCACAAAAATTTGCAT 839073 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1156899393113010