Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Octopus_20bimaculoides_20[refseq_20GCF_5F001194135.1_202015-08-18] 151,674 sequences; 2,338,188,782 total letters Query= NC_030230.1 Length=372707 Score E Sequences producing significant alignments: (Bits) Value seq15337 158 3e-33 seq7435 89.7 1e-12 seq35681 87.8 4e-12 >seq15337 Length=1015838 Score = 158 bits (174), Expect = 3e-33 Identities = 164/215 (76%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 || ||||| ||||| || |||||||| |||| ||||||||| | | || | |||||| Sbjct 839056 AGTACAAGATGGAGGGTAGATTCTTTCTGGATATTGTAATCTGAGAGGGTACGACCATCT 838997 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || | ||| ||||| || || || | || ||||| || || ||||||||||| |||||| Sbjct 838996 TCCAACTGTTTCCCTGCAAAAATCAAACGCTGTTGATCTGGAGGAATACCTTCTTTGTCT 838937 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 ||||||||| ||| ||| ||| || || || || | |||||| || || || || ||| Sbjct 838936 TGGATCTTTGCCTTTACATTTTCAATTGTATCAGACGGTTCCACCTCCAAAGTAATGGTC 838877 Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCATTTT 225716 || ||||||| ||||||| || | ||||||||| Sbjct 838876 TTTCCCGTCAGTGTTTTTACAAAAATTTGCATTTT 838842 Score = 152 bits (168), Expect = 1e-31 Identities = 161/212 (76%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 || ||||| || || || |||||||| |||| ||||||||| | | ||| | |||||| Sbjct 841110 AGTACAAGATGAAGGGTAGATTCTTTCTGGATATTGTAATCTGAGAGAGTACGACCATCT 841051 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || ||||| ||||| || || || || || ||||| || || ||||||||||| |||||| Sbjct 841050 TCCAGCTGTTTCCCTGCAAAAATCAGACGCTGTTGATCTGGAGGAATACCTTCTTTGTCT 840991 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 ||||||||| ||| ||| ||| ||||| ||||| | ||| || || || ||||| || Sbjct 840990 TGGATCTTTGCCTTTACATTTTCAATGGTATCTGAAGGTTCTACTTCCAATGTGATGGTT 840931 Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 || || || | ||||| | || | |||||| Sbjct 840930 TTTCCTGTAAGTGTTTTCACAAAAATTTGCAT 840899 Score = 145 bits (160), Expect = 2e-29 Identities = 165/219 (75%), Gaps = 2/219 (1%) Strand=Plus/Minus Query 225496 AGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTC 225555 |||| || ||||| |||||||| |||||||| |||| ||||||||| | | ||| | Sbjct 840432 AGTCGGAGTACAAGATGGAGAGTAGATTCTTTCTGGATATTGTAATCCGAGAGAGTACGA 840373 Query 225556 CCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCC 225615 |||||||| ||||| ||||| || || || || || ||||| || || ||||||||||| Sbjct 840372 CCATCTTCCAGCTGTTTCCCTGCAAAAATCAGACGCTGTTGATCTGGGGGAATACCTTCT 840313 Query 225616 TTGTCTTGGATCTTTTGC-TTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGT 225674 |||||||| || ||| || || ||| ||| || ||||| || | ||| || || || || Sbjct 840312 TTGTCTTGAAT-TTTGGCTTTTACATTTTCAATAGTGTCGGAAGGTTCTACTTCCAATGT 840254 Query 225675 GATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 ||| || || || || | ||||| | || | |||||| Sbjct 840253 GATGGTTTTTCCTGTAAGTGTTTTCACAAAAATTTGCAT 840215 Score = 145 bits (160), Expect = 2e-29 Identities = 165/219 (75%), Gaps = 2/219 (1%) Strand=Plus/Minus Query 225496 AGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTC 225555 |||| || ||||| |||||||| |||||||| |||| ||||||||| | | ||| | Sbjct 840660 AGTCGGAGTACAAGATGGAGAGTTGATTCTTTCTGGATATTGTAATCTGAGAGAGTACGA 840601 Query 225556 CCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCC 225615 |||||||| | ||| ||||| || || || || || ||||| || || ||||||||||| Sbjct 840600 CCATCTTCCAACTGTTTCCCTGCAAAAATCAGACGCTGTTGATCTGGAGGAATACCTTCT 840541 Query 225616 TTGTCTTGGATCTTTTGC-TTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGT 225674 |||||||| || ||| || || ||| ||| || ||||| || | ||| || || || || Sbjct 840540 TTGTCTTGAAT-TTTGGCTTTTACATTTTCAATAGTGTCGGAAGGTTCTACTTCCAATGT 840482 Query 225675 GATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 ||| || || || || | ||||||| || | |||||| Sbjct 840481 GATGGTTTTTCCTGTAAGTGTTTTTACAAAAATTTGCAT 840443 Score = 145 bits (160), Expect = 2e-29 Identities = 165/219 (75%), Gaps = 2/219 (1%) Strand=Plus/Minus Query 225496 AGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTC 225555 |||| || ||||| ||||| || |||||||| |||| ||||||||| | | ||| | Sbjct 840888 AGTCGAAGTACAAGATGGAGGGTAGATTCTTTCTGGATATTGTAATCTGAGAGAGTACGA 840829 Query 225556 CCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCC 225615 |||||||| ||||| || || || || || || |||||||| || || ||||||||||| Sbjct 840828 CCATCTTCCAGCTGTTTTCCTGCAAAAATCAGACGTTGTTGATCTGGGGGAATACCTTCT 840769 Query 225616 TTGTCTTGGATCTTTTGC-TTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGT 225674 |||||||| || ||| || || ||| ||| ||||| ||||| | || || || || || Sbjct 840768 TTGTCTTGAAT-TTTGGCTTTTACATTTTCAATGGTATCTGAAGGCTCTACTTCCAATGT 840710 Query 225675 GATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 ||| || || || || | ||||||| || | |||||| Sbjct 840709 GATGGTTTTTCCTGTGAGTGTTTTTACAAAAATTTGCAT 840671 Score = 118 bits (130), Expect = 3e-21 Identities = 121/158 (77%), Gaps = 0/158 (0%) Strand=Plus/Minus Query 225556 CCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCC 225615 |||||||| ||||| ||||| || || || || || ||||| || || ||||||||||| Sbjct 839230 CCATCTTCCAGCTGTTTCCCTGCAAAAATCAGACGCTGTTGATCTGGAGGAATACCTTCT 839171 Query 225616 TTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTG 225675 ||||||||||||||| ||| ||| ||| ||||| ||||| | ||| || || || ||| Sbjct 839170 TTGTCTTGGATCTTTGCCTTTACATTTTCAATGGTATCTGAAGGTTCTACTTCCAATGTG 839111 Query 225676 ATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 || || || || || | ||||| | || | |||||| Sbjct 839110 ATGGTTTTTCCTGTAAGTGTTTTCACAAAAATTTGCAT 839073 >seq7435 Length=2526598 Score = 89.7 bits (98), Expect = 1e-12 Identities = 79/97 (81%), Gaps = 4/97 (4%) Strand=Plus/Minus Query 370676 GGATGACCAAAAAATCAGAATAAATGTTGATAAAGGATAGGATCGCCTCCGCCTGATGGA 370735 ||||| ||||| |||||||||||||||||||| | || || | |||| ||| |||| Sbjct 878374 GGATGTCCAAAGAATCAGAATAAATGTTGATATAAAATTGG---GTCTCCTCCTCTTGGA 878318 Query 370736 TCAAAAAAGCTAGTATTAAAATTTCTATCAGTTAAAA 370772 |||| |||| | ||||||||||||| |||| |||||| Sbjct 878317 TCAAGAAAG-TGGTATTAAAATTTCGATCACTTAAAA 878282 >seq35681 Length=251888 Score = 87.8 bits (96), Expect = 4e-12 Identities = 102/138 (74%), Gaps = 0/138 (0%) Strand=Plus/Plus Query 7585 TTTGTTATGATTTTCTTTTTTGTTATGCCGGTTATGATAGGCGGTTTCGGAAATTGATTC 7644 ||||| || || || ||| ||||||| || ||||| || || || || | || ||||| Sbjct 3138 TTTGTAATAATATTTTTTCTTGTTATACCCGTTATAATTGGAGGATTTGTTAACTGATTA 3197 Query 7645 GTTCCTTTAATGATTGGTGCTCCTGATATGGCTTTTCCAAGGCTTAACAATATAAGTTTT 7704 ||||| ||||| | ||||| || | ||| || || ||| | | || |||||||||||| Sbjct 3198 GTTCCCTTAATATTAGGTGCCCCAGGTATAGCATTCCCACGAATAAATAATATAAGTTTT 3257 Query 7705 TGATTACTACCGCCTTCC 7722 ||| | |||| || ||| Sbjct 3258 TGACTTTTACCTCCCTCC 3275 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1190213726541756