Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Octopus_20bimaculoides_20[refseq_20GCF_5F001194135.1_202015-08-18] 151,674 sequences; 2,338,188,782 total letters Query= NC_031033.1 Length=217124 Score E Sequences producing significant alignments: (Bits) Value seq24522 223 5e-53 seq74122 114 2e-20 >seq24522 Length=437104 Score = 223 bits (246), Expect = 5e-53 Identities = 308/426 (72%), Gaps = 14/426 (3%) Strand=Plus/Plus Query 77733 ATCTCGGTACATAGATTACTACATTTGATAGTGCCCAGATTTTGTTGGTTGCTCTTTTTA 77792 || || ||||||| |||||| ||||| || || || || ||||||||||||||||| Sbjct 250044 ATTTCTGTACATAAATTACTGCATTTTATTGTCCCAAGGTTTTGTTGGTTGCTCTTGCGG 250103 Query 77793 TTGCATGAGTCCTTATAAAGAATAAACGGAGTCCCGGTTTCAATCTGTGATTCGATAATA 77852 || || || ||||| || || || | || || || ||||| | || | ||| |||| Sbjct 250104 TTACAAGAATCCTTGTACAGCATGTAAGGTGTACCAGTTTCGGTTTGAGCTTCTATAACT 250163 Query 77853 GATTTCCAGACGACTCT-AGCTTTTATCATAGATTTGTATCGCCTCT-----CTCTTTCA 77906 | | |||||| ||| |||||| | || || | | ||| | || ||||| Sbjct 250164 GCATACCAGACTT-TCTGAGCTTTCA-----GAGTTCTTTTACCTTTACCAGCTTTTTCA 250217 Query 77907 TAT-TGAGTATATAGCCGTTCAAATTCATCTCCCCAAACATCATCCAATCCAGGGCATTC 77965 || ||| |||| | ||||||||| | |||||||||||| | || |||||||| Sbjct 250218 TAACTGA-TATACAAGTCTTCAAATTCTTTTCCCCAAACATCCGAAAGGCCTGGGCATTC 250276 Query 77966 ATTTGGGCACATCAATGACCAGTCACCATCTTCCTTAACTCGTTTCATAAAGAGATCAGG 78025 ||| || |||||||||| ||| ||||||| ||| | |||||||||||| || |||||||| Sbjct 250277 ATTGGGACACATCAATGTCCAATCACCATTTTCTTCAACTCGTTTCATGAAAAGATCAGG 250336 Query 78026 TATCCATAGAGCAATAAATAGATCTCGGGTTCTATGTTCTTCATTTCCTGTATTCTTTTT 78085 ||||| || ||| || | ||||||| || ||||| || ||||||||||||||||| Sbjct 250337 AATCCAGAGGGCATAGAACAAGTCTCGGGCTCGCTGTTCATCCTTTCCTGTATTCTTTTT 250396 Query 78086 AAGATCGAGAAACTCCATAATATCAGAATGCCATGGTTCTAGATATATTGCCATAACTCC 78145 ||| || || || | ||||| | |||||| ||||||| || || || | | |||| Sbjct 250397 GCAATCAAGGAAGTCAAAGATATCGGCATGCCAGGGTTCTAAGTAAATAGCAAAAGCTCC 250456 Query 78146 AGGTCG 78151 ||| || Sbjct 250457 AGGGCG 250462 Score = 86.0 bits (94), Expect = 9e-12 Identities = 98/132 (74%), Gaps = 0/132 (0%) Strand=Plus/Plus Query 77130 AATTCTCCAGACAATACTCTACGAGTGTAAATATTACTGGTATATGGTTCCACAGATTCA 77189 ||||||||||||| || | | || |||||||| |||||||| | ||| | || ||| Sbjct 241873 AATTCTCCAGACAGCACACGTCTTGTATAAATATTGCTGGTATAGGCTTCAATGGACTCA 241932 Query 77190 TTGTTTCCCAAAATTTGAGCAGTAGAAGCAGTTGGCATAGGTGCCACCAATAAACTATTT 77249 || ||||| | ||| || || || |||||||||||||| || |||| || | || || Sbjct 241933 TTATTTCCAAGAATCTGGGCTGTGGAAGCAGTTGGCATCGGAGCCAGTAACAGGCTGTTC 241992 Query 77250 CTGAGACCATGT 77261 || | |||||| Sbjct 241993 CTTACTCCATGT 242004 Score = 86.0 bits (94), Expect = 9e-12 Identities = 148/214 (69%), Gaps = 2/214 (1%) Strand=Plus/Plus Query 77358 CCATTATATGTTTCATAAGGTCCTTCTGTTTCAGCTAGTTCACAACTCGCTTCCAATGCT 77417 |||| || || || ||||| || | ||||||| |||||||| ||| || || | Sbjct 246903 CCATCGTAAGTCTCGTAAGGACCAAATTTTTCAGCAAGTTCACAGCTCATCTCTAAGGAA 246962 Query 77418 CCGTAATAAATTGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCAATACTATCAAAC 77477 | | || || || | || |||| ||||| | ||||||||||| || |||||| Sbjct 246963 GCAAAGTAGATAGTAGCAAAGATCTGTTTATTCAATTCTTGTGCTTCTTCGCTGTCAAAC 247022 Query 77478 GGATAATGTAAAAGAATAAAGGCATCTGCTAATCCCTGAACTCCAATACCAATAGGTCTA 77537 || || | | |||| || ||||| || || || ||||| ||||| ||||| |||| | Sbjct 247023 GGGTATCGCATTAGAAGGAAAGCATCGGCCAAACCTTGAACACCAATGCCAATTGGTCGA 247082 Query 77538 TGTCTCTTATTGGAAATTTTAGCTTCTGGAATAG 77571 |||| | | ||||| ||| || |||||| || Sbjct 247083 TGTCGCATGTTGGATCGTTTTGC--CTGGAAGAG 247114 >seq74122 Length=500396 Score = 114 bits (126), Expect = 2e-20 Identities = 83/96 (86%), Gaps = 0/96 (0%) Strand=Plus/Minus Query 47834 AGACATAACTCCCATTTTTTGATATTCACCCACACGTTTCTCGAAAAAATTAGTTTTGCC 47893 |||||| || |||||||||||||||||||| || | ||||| || |||||||| || || Sbjct 193926 AGACATGACGCCCATTTTTTGATATTCACCAACTCTCTTCTCAAAGAAATTAGTCTTTCC 193867 Query 47894 TTCCAATGATATATTTTCCATAAAATCAAATGGATT 47929 ||||||||| || | ||||||||||||||||||||| Sbjct 193866 TTCCAATGAGATGTGTTCCATAAAATCAAATGGATT 193831 Score = 109 bits (120), Expect = 8e-19 Identities = 157/220 (71%), Gaps = 1/220 (0%) Strand=Plus/Minus Query 48523 CCAAATTCTCATTTACTATTCCATCACTAGCAGCAAAAAATGCTAATACATGTTTAATAA 48582 |||| || ||||| || ||||||||||| ||||||||||| || || ||||| ||| | Sbjct 189527 CCAAGTTTTCATTAACAATTCCATCACTTGCAGCAAAAAAAGCCAAGACATGAGAAATGA 189468 Query 48583 AATATTTTTCGTTGGAAGTCAGTTTATTCCAGTCATTGATATCTTTTGATATATCTACTT 48642 ||| | ||| | | ||| ||| | ||||| | ||| ||||||| ||| || | Sbjct 189467 AATGCTGTTCATCAGTTTTCAATTTTTCCCAGTGGCCCAAATCCTTTGATAAATCAACCT 189408 Query 48643 CTTCAGCTGTCCAAAATGATGCCTCTGCTTTTTTATACATATTCCATATATCACTGTATT 48702 |||| | ||||| || || || | ||||| |||||||| ||||||| || |||| Sbjct 189407 CTTCCACAGTCCAGAAAGAAGCAACAGCTTTCTTATACATGCTCCATATGTCTTGATATT 189348 Query 48703 GGATTGGGAAAATAACAAATCTATTTG-GATTTTTTGCAA 48741 | || || || || ||||| | |||| | ||| ||| || Sbjct 189347 GAATAGGAAACATTACAAAACGGTTTGAGCTTTCTTGTAA 189308 Score = 84.2 bits (92), Expect = 3e-11 Identities = 93/124 (75%), Gaps = 0/124 (0%) Strand=Plus/Minus Query 48401 ATCTTTAACGTAAGTATCTATTAAAAGACTATACATTTCGGAGTGAATATTTTCAATTGC 48460 |||||||| ||| ||||| || | ||||| |||||||| || |||||||||||||| || Sbjct 191302 ATCTTTAATGTATGTATCAATAAGGAGACTGTACATTTCAGAATGAATATTTTCAATAGC 191243 Query 48461 CATCTGAAATCCGTAAAAACATCTCGCTTCTGTGATCTGTACCTCCGTACAAAATCGTTC 48520 || || ||| ||||||| | | ||||| | || ||| | ||| | | || ||||| Sbjct 191242 AATTTGGAATGCGTAAAATGAACGTGCTTCAGAGACCTGGATTTCCTGATAGAACCGTTC 191183 Query 48521 AGCC 48524 | || Sbjct 191182 AACC 191179 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 693351760055360