Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Octopus_20bimaculoides_20[refseq_20GCF_5F001194135.1_202015-08-18] 151,674 sequences; 2,338,188,782 total letters Query= NC_031038.1 Length=222832 Score E Sequences producing significant alignments: (Bits) Value seq24522 214 3e-50 seq74122 143 4e-29 >seq24522 Length=437104 Score = 214 bits (236), Expect = 3e-50 Identities = 292/400 (73%), Gaps = 12/400 (3%) Strand=Plus/Plus Query 76328 ATCTCCGTGCATAGATTACTACACTTGATAGTTCCAAGATTTTGTTGGTTGCTCTTTTTG 76387 || || || |||| |||||| || || || || ||||| ||||||||||||||||| | Sbjct 250044 ATTTCTGTACATAAATTACTGCATTTTATTGTCCCAAGGTTTTGTTGGTTGCTCTTGCGG 250103 Query 76388 TTACATGAGTCCTTATAAAGAACAAACGGAGTTCCAGTTTCAATCTGTGATTCGATAATA 76447 ||||| || ||||| || || | | || || |||||||| | || | ||| |||| Sbjct 250104 TTACAAGAATCCTTGTACAGCATGTAAGGTGTACCAGTTTCGGTTTGAGCTTCTATAACT 250163 Query 76448 GATTTCCAGACGACTCT-AGCTTTTATTATAGAT-TTGTATCGCTTCT--CTCTTTCATA 76503 | | |||||| ||| |||||| | || | || || | | | || ||||||| Sbjct 250164 GCATACCAGACTT-TCTGAGCTTTCAG---AGTTCTTTTACCTTTACCAGCTTTTTCATA 250219 Query 76504 TTGTGTATATAACCGTTCAAATTCATCTCCCCAAACATCATCCAAA--CCAGGACATTCA 76561 |||| || ||||||||| | |||||||||||| | ||| || || |||||| Sbjct 250220 ACTGATATACAAGTCTTCAAATTCTTTTCCCCAAACATC--CGAAAGGCCTGGGCATTCA 250277 Query 76562 TTCGGACACATCAATGACCACTCACCATCTTCCTTAACCCGTTTCATAAAGAGATCAGGT 76621 || ||||||||||||| ||| ||||||| ||| | ||| |||||||| || |||||||| Sbjct 250278 TTGGGACACATCAATGTCCAATCACCATTTTCTTCAACTCGTTTCATGAAAAGATCAGGA 250337 Query 76622 ATCCATAGAGCAATAAATAGATCTCGGGTTCTACGTTCTTCATTTCCTGTATTCTTTTTA 76681 ||||| || ||| || | ||||||| || |||| || ||||||||||||||||| Sbjct 250338 ATCCAGAGGGCATAGAACAAGTCTCGGGCTCGCTGTTCATCCTTTCCTGTATTCTTTTTG 250397 Query 76682 AGATCTAGGAACTCCATAATATCAGAATGCCATGGTTCTA 76721 ||| ||||| || | ||||| | |||||| ||||||| Sbjct 250398 CAATCAAGGAAGTCAAAGATATCGGCATGCCAGGGTTCTA 250437 Score = 86.0 bits (94), Expect = 9e-12 Identities = 98/132 (74%), Gaps = 0/132 (0%) Strand=Plus/Plus Query 75725 AATTCTCCAGACAATACTCTTCGAGTGTAAATATTACTGGTATATGGTTCCACAGATTCA 75784 ||||||||||||| || | || || |||||||| |||||||| | ||| | || ||| Sbjct 241873 AATTCTCCAGACAGCACACGTCTTGTATAAATATTGCTGGTATAGGCTTCAATGGACTCA 241932 Query 75785 TTGTTTCCCAAAATTTGAGCAGTTGAAGCAGTCGGCATAGGTGCCACCAATAAACTATTT 75844 || ||||| | ||| || || || |||||||| ||||| || |||| || | || || Sbjct 241933 TTATTTCCAAGAATCTGGGCTGTGGAAGCAGTTGGCATCGGAGCCAGTAACAGGCTGTTC 241992 Query 75845 CTGAGACCATGT 75856 || | |||||| Sbjct 241993 CTTACTCCATGT 242004 >seq74122 Length=500396 Score = 143 bits (158), Expect = 4e-29 Identities = 164/219 (75%), Gaps = 1/219 (0%) Strand=Plus/Minus Query 47013 CAAATTCTCATTCACTATTCCATCACTAGCAGCAAAAAATGCCAATACATGTTTAATAAA 47072 ||| || ||||| || ||||||||||| ||||||||||| ||||| ||||| ||| || Sbjct 189526 CAAGTTTTCATTAACAATTCCATCACTTGCAGCAAAAAAAGCCAAGACATGAGAAATGAA 189467 Query 47073 ATATTTTTCATCGGTAGTCAGTTTATTCCAGTCATTGATATCTTTTGATATATCTACTTC 47132 || | |||||| || ||| ||| | ||||| | ||| ||||||| ||| || || Sbjct 189466 ATGCTGTTCATCAGTTTTCAATTTTTCCCAGTGGCCCAAATCCTTTGATAAATCAACCTC 189407 Query 47133 TTCAGCTGTCCAGAATGACGCCTCTGCTTTTTTATACATATTCCATATATCACGATATTG 47192 ||| | |||||||| || || | ||||| |||||||| ||||||| || ||||||| Sbjct 189406 TTCCACAGTCCAGAAAGAAGCAACAGCTTTCTTATACATGCTCCATATGTCTTGATATTG 189347 Query 47193 GATCGGAAAAATAACAAATCTATTTG-GATTTTTTGCAA 47230 || ||||| || ||||| | |||| | ||| ||| || Sbjct 189346 AATAGGAAACATTACAAAACGGTTTGAGCTTTCTTGTAA 189308 Score = 109 bits (120), Expect = 8e-19 Identities = 153/215 (71%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 46654 TCATCTCTACTAATTAATTCGTTAGAAAATGTGAGCCCAGGCATTAGTCCACGCTTTTTG 46713 |||||||| || |||||||| || ||||| | |||||||| | |||||||| || Sbjct 192223 TCATCTCTGCTGATTAATTCATTGCTGAATGTCAAACCAGGCATGATACCACGCTTCTTT 192164 Query 46714 AGCCAAAATATAGCCGCGAAAGATCCAGAAAAGAATATGCCTTCTACAGCCGCGAATGCG 46773 | ||| || ||||| || ||||| ||||| || || || |||||||| | || || || Sbjct 192163 AACCAGAAAATAGCAGCAAAAGAACCAGAGAAAAAGATTCCTTCTACCCCAGCAAAAGCA 192104 Query 46774 ACAAGTCTCTCTCCGTAACTGGCATCATTATGAATCCACCTTTGAGCCCAATCAGCCTTT 46833 |||| | |||| || | | | | | |||||| | |||||||||||| || Sbjct 192103 ACAACACGCTCTGAATATGGGACCTTGTCAGAAATCCATTTCAAAGCCCAATCAGCTTTC 192044 Query 46834 TTCTTTACACAAGGCATTGTTTCTATAGCATTAAA 46868 || || | || |||||||| ||||| ||||| || Sbjct 192043 TTTTTAATGCATGGCATTGTCTCTATGGCATTGAA 192009 Score = 104 bits (114), Expect = 3e-17 Identities = 80/95 (84%), Gaps = 0/95 (0%) Strand=Plus/Minus Query 46324 GACATAACTCCCATTTTTTGGTATTCACCTACACGTTTCTCGAAAAAATTAGTTTTGCCT 46383 ||||| || ||||||||||| |||||||| || | ||||| || |||||||| || ||| Sbjct 193925 GACATGACGCCCATTTTTTGATATTCACCAACTCTCTTCTCAAAGAAATTAGTCTTTCCT 193866 Query 46384 TCCAATGATATATTTTCCATAAAATCAAACGGATT 46418 |||||||| || | ||||||||||||||| ||||| Sbjct 193865 TCCAATGAGATGTGTTCCATAAAATCAAATGGATT 193831 Score = 89.7 bits (98), Expect = 7e-13 Identities = 75/92 (82%), Gaps = 0/92 (0%) Strand=Plus/Minus Query 46890 ATCTTTAACATATGTATCTATTAAAAGACTATACATTTCTGAATGAATGTTTTCAATAGC 46949 |||||||| |||||||| || | ||||| |||||||| |||||||| ||||||||||| Sbjct 191302 ATCTTTAATGTATGTATCAATAAGGAGACTGTACATTTCAGAATGAATATTTTCAATAGC 191243 Query 46950 CATCTGAAATCCGTAAAAACATCTTGCTTCAG 46981 || || ||| ||||||| | | |||||||| Sbjct 191242 AATTTGGAATGCGTAAAATGAACGTGCTTCAG 191211 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 711582729847680