Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Octopus_20bimaculoides_20[refseq_20GCF_5F001194135.1_202015-08-18] 151,674 sequences; 2,338,188,782 total letters Query= NC_031465.1 Length=360610 Score E Sequences producing significant alignments: (Bits) Value seq15337 120 7e-22 >seq15337 Length=1015838 Score = 120 bits (132), Expect = 7e-22 Identities = 159/221 (72%), Gaps = 0/221 (0%) Strand=Plus/Minus Query 151884 CTGAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTT 151943 || |||| ||| |||||||| |||||||| ||||| ||||| |||||||| | | ||| Sbjct 840435 CTCAGTCGGAGTACAAGATGGAGAGTAGATTCTTTCTGGATATTGTAATCCGAGAGAGTA 840376 Query 151944 CTCCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCT 152003 | |||||||| || |||||| || || || || | ||| || || | | || ||| Sbjct 840375 CGACCATCTTCCAGCTGTTTCCCTGCAAAAATCAGACGCTGTTGATCTGGGGGAATACCT 840316 Query 152004 TCCTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGA 152063 || || ||||||||||| ||| ||| | || | |||| ||| |||||||| | Sbjct 840315 TCTTTGTCTTGAATTTTGGCTTTTACATTTTCAATAGTGTCGGAAGGTTCTACTTCCAAT 840256 Query 152064 GTAATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || || ||||| || || || || ||||| || | ||||| Sbjct 840255 GTGATGGTTTTTCCTGTAAGTGTTTTCACAAAAATTTGCAT 840215 Score = 111 bits (122), Expect = 4e-19 Identities = 157/221 (71%), Gaps = 0/221 (0%) Strand=Plus/Minus Query 151884 CTGAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTT 151943 || |||| || |||||||| || ||||| ||||| ||||| |||||||| | | ||| Sbjct 840891 CTCAGTCGAAGTACAAGATGGAGGGTAGATTCTTTCTGGATATTGTAATCTGAGAGAGTA 840832 Query 151944 CTCCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCT 152003 | |||||||| || ||| || || || || || | || || || | | || ||| Sbjct 840831 CGACCATCTTCCAGCTGTTTTCCTGCAAAAATCAGACGTTGTTGATCTGGGGGAATACCT 840772 Query 152004 TCCTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGA 152063 || || ||||||||||| ||| ||| | || | | | |||||| ||||||||| | Sbjct 840771 TCTTTGTCTTGAATTTTGGCTTTTACATTTTCAATGGTATCTGAAGGCTCTACTTCCAAT 840712 Query 152064 GTAATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || || ||||| || ||||| || || || || | ||||| Sbjct 840711 GTGATGGTTTTTCCTGTGAGTGTTTTTACAAAAATTTGCAT 840671 Score = 107 bits (118), Expect = 4e-18 Identities = 151/212 (71%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952 || ||||||||||| ||||| ||||| ||||| |||||||| | | ||| | |||||| Sbjct 841110 AGTACAAGATGAAGGGTAGATTCTTTCTGGATATTGTAATCTGAGAGAGTACGACCATCT 841051 Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012 || || |||||| || || || || | ||| || || | | || ||||| || ||| Sbjct 841050 TCCAGCTGTTTCCCTGCAAAAATCAGACGCTGTTGATCTGGAGGAATACCTTCTTTGTCT 840991 Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTT 152072 || || ||| || ||| | || | | | |||||| |||||||| | || || ||| Sbjct 840990 TGGATCTTTGCCTTTACATTTTCAATGGTATCTGAAGGTTCTACTTCCAATGTGATGGTT 840931 Query 152073 TTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || || || || || ||||| || | ||||| Sbjct 840930 TTTCCTGTAAGTGTTTTCACAAAAATTTGCAT 840899 Score = 105 bits (116), Expect = 2e-17 Identities = 156/221 (71%), Gaps = 0/221 (0%) Strand=Plus/Minus Query 151884 CTGAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTT 151943 || |||| ||| |||||||| ||||| || ||||| ||||| |||||||| | | ||| Sbjct 840663 CTTAGTCGGAGTACAAGATGGAGAGTTGATTCTTTCTGGATATTGTAATCTGAGAGAGTA 840604 Query 151944 CTCCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCT 152003 | |||||||| | |||||| || || || || | ||| || || | | || ||| Sbjct 840603 CGACCATCTTCCAACTGTTTCCCTGCAAAAATCAGACGCTGTTGATCTGGAGGAATACCT 840544 Query 152004 TCCTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGA 152063 || || ||||||||||| ||| ||| | || | |||| ||| |||||||| | Sbjct 840543 TCTTTGTCTTGAATTTTGGCTTTTACATTTTCAATAGTGTCGGAAGGTTCTACTTCCAAT 840484 Query 152064 GTAATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || || ||||| || || || || || || || | ||||| Sbjct 840483 GTGATGGTTTTTCCTGTAAGTGTTTTTACAAAAATTTGCAT 840443 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1151578553357254