Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oikopleura_20dioica_20[genbank_20GCA_5F000209535.1_202010-12-02] 1,260 sequences; 70,471,451 total letters Query= NC_020851.1 Length=208007 Score E Sequences producing significant alignments: (Bits) Value seq685 96.9 5e-15 >seq685 Length=65961 Score = 96.9 bits (106), Expect = 5e-15 Identities = 65/73 (89%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 53741 TGGAGAATAACGGACTCGAACCGTTGACATCCTACTTGCAAAGCAGGCGCTCTACCAACT 53800 ||||| ||||||| ||||||||||||||| || |||||||||||| ||||||||||||| Sbjct 65506 TGGAGGTTAACGGATTCGAACCGTTGACATTCTGCTTGCAAAGCAGACGCTCTACCAACT 65447 Query 53801 GAGCTAATTCCCC 53813 ||||||| |||| Sbjct 65446 GAGCTAAACCCCC 65434 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 665483918463200