Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Oikopleura_20dioica_20[genbank_20GCA_5F000209535.1_202010-12-02]
1,260 sequences; 70,471,451 total letters
Query= NC_022646.1
Length=101818
Score E
Sequences producing significant alignments: (Bits) Value
seq654 131 1e-25
seq355 125 5e-24
>seq654
Length=87504
Score = 131 bits (144), Expect = 1e-25
Identities = 156/212 (74%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825
||||||| ||||| |||| ||| ||||| ||||| |||||||| || ||||| ||||
Sbjct 81564 AGGACCAAGTGAAGGGTGGACTCTTTCTGGATGTTGTAGTCCGAAAGAGTGCGCCCATCT 81623
Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885
|| || ||||| ||||||||||| ||||| ||||||||| | || | || || |||||
Sbjct 81624 TCAAGCTGCTTGCCGGCGAAGATAAGTCGCTGCTGGTCTGGTGGAATGCCTTCTTTGTCT 81683
Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945
| ||||| || ||| | | || | || ||||| || || | ||| || ||
Sbjct 81684 TGGATTTTGGCCTTCACGTTTTCAATGGTGTCGGAAGCCTCAACCTCGAGGGTGATTGTT 81743
Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977
|| || || ||||| || || |||||||||||
Sbjct 81744 TTACCGGTAAGGGTTTTGACGAAGATCTGCAT 81775
Score = 125 bits (138), Expect = 5e-24
Identities = 146/195 (75%), Gaps = 4/195 (2%)
Strand=Plus/Plus
Query 34786 CTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAA 34845
||| || |||||||| ||||| || || | || |||| || || ||||| ||||| ||
Sbjct 82904 CTCTTTTTGAATGTTGTAGTCAGAAAGAGTTCGGCCATCCTCAAGCTGCTTGCCGGCAAA 82963
Query 34846 GATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGA 34905
||| ||||| ||||||||| |||| | || |||||||| | || || |||||| |
Sbjct 82964 GATGAGTCGCTGCTGGTCTGGCGGGATACCTTCCTTGTCCTGGATCTTGGCTTTGAC--A 83021
Query 34906 TGCT--ATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTT 34963
| || || | ||| |||||||| |||| || ||||| || || ||||| |||||
Sbjct 83022 TTCTCGATGGTGTCAGAAGCCTCGACCTCAAGAGTGATGGTTTTGCCGGTGAGAGTCTTG 83081
Query 34964 ACAAAGATCTGCATG 34978
|||||||||||||||
Sbjct 83082 ACAAAGATCTGCATG 83096
Score = 107 bits (118), Expect = 1e-18
Identities = 151/212 (71%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825
||||| ||||||| || ||| ||||| ||||| ||||| || | | |||| ||||
Sbjct 81792 AGGACGAGGTGAAGCGTCGACTCTTTCTGGATGTTGTAGTCGGACAAGGTGCGACCATCT 81851
Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885
|| || ||||| ||||||||||| ||||| ||||||||| | || | || ||||||||
Sbjct 81852 TCAAGCTGCTTGCCGGCGAAGATGAGTCGCTGCTGGTCTGGTGGAATACCTTCCTTGTCT 81911
Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945
| || || || ||| | || | || ||| || || |||| || || |||
Sbjct 81912 TGGATCTTAGCCTTCACGTTGTCGATAGTGTCCGAGGCTTCAACTTCAAGCGTGATCGTC 81971
Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977
|| || || | ||||| || |||||||||||
Sbjct 81972 TTGCCGGTTAAAGTCTTGACGAAGATCTGCAT 82003
>seq355
Length=2689
Score = 125 bits (138), Expect = 5e-24
Identities = 155/212 (73%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825
||||||| ||||| |||| ||| ||||| ||||| |||||||| || ||||| ||||
Sbjct 156 AGGACCAAGTGAAGGGTGGACTCTTTCTGGATGTTGTAGTCCGAAAGAGTGCGCCCATCT 215
Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885
|| || ||||| ||||||||||| ||||| ||||||||| | || | || || |||||
Sbjct 216 TCAAGCTGCTTGCCGGCGAAGATAAGTCGCTGCTGGTCTGGTGGAATGCCTTCTTTGTCT 275
Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945
| ||||| || ||| | || | || ||| || || |||| || || |||
Sbjct 276 TGGATTTTGGCCTTCACGTTGTCGATAGTGTCCGAGGCTTCAACTTCAAGCGTGATCGTC 335
Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977
|| || || | ||||| || |||||||||||
Sbjct 336 TTGCCGGTTAAAGTCTTGACGAAGATCTGCAT 367
Score = 122 bits (134), Expect = 6e-23
Identities = 145/195 (74%), Gaps = 4/195 (2%)
Strand=Plus/Plus
Query 34786 CTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAA 34845
||| || |||||||| ||||| || || | || |||| || || ||||| ||||| ||
Sbjct 1952 CTCTTTTTGAATGTTGTAGTCAGAAAGAGTTCGGCCATCCTCAAGCTGCTTGCCGGCAAA 2011
Query 34846 GATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGA 34905
||| ||||| ||||||||| |||| | || |||||||| | || || |||||| |
Sbjct 2012 GATGAGTCGCTGCTGGTCTGGCGGGATACCTTCCTTGTCCTGGATCTTGGCTTTGAC--A 2069
Query 34906 TGCT--ATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTT 34963
| || || | ||| |||||||| || | || ||||| || || ||||| |||||
Sbjct 2070 TTCTCGATGGTGTCAGAAGCCTCGACCTCGAGAGTGATGGTTTTGCCGGTGAGAGTCTTG 2129
Query 34964 ACAAAGATCTGCATG 34978
|||||||||||||||
Sbjct 2130 ACAAAGATCTGCATG 2144
Score = 113 bits (124), Expect = 3e-20
Identities = 152/212 (72%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825
||||| || |||| || ||| ||||| ||||| |||||||| || ||||| ||||
Sbjct 384 AGGACGAGATGAAGCGTCGACTCTTTCTGGATGTTGTAGTCCGAAAGAGTGCGCCCATCT 443
Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885
|| || ||||| ||||||||||| ||||| ||||||||| | || | || || |||||
Sbjct 444 TCAAGCTGCTTGCCGGCGAAGATAAGTCGCTGCTGGTCTGGTGGAATGCCTTCTTTGTCT 503
Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945
| ||||| || ||| | || | || ||| || || |||| || || |||
Sbjct 504 TGGATTTTGGCCTTCACGTTGTCGATAGTGTCCGAGGCTTCAACTTCAAGCGTGATCGTC 563
Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977
|| || || | ||||| || |||||||||||
Sbjct 564 TTGCCGGTTAAAGTCTTGACGAAGATCTGCAT 595
Score = 113 bits (124), Expect = 3e-20
Identities = 152/212 (72%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825
||||| || |||| || ||| ||||| ||||| |||||||| || ||||| ||||
Sbjct 612 AGGACGAGATGAAGCGTCGACTCTTTCTGGATGTTGTAGTCCGAAAGAGTGCGCCCATCT 671
Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885
|| || ||||| ||||||||||| ||||| ||||||||| | || | || || |||||
Sbjct 672 TCAAGCTGCTTGCCGGCGAAGATAAGTCGCTGCTGGTCTGGTGGAATGCCTTCTTTGTCT 731
Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945
| ||||| || ||| | || | || ||| || || |||| || || |||
Sbjct 732 TGGATTTTGGCCTTCACGTTGTCGATAGTGTCCGAGGCTTCAACTTCAAGCGTGATCGTC 791
Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977
|| || || | ||||| || |||||||||||
Sbjct 792 TTGCCGGTTAAAGTCTTGACGAAGATCTGCAT 823
Score = 104 bits (114), Expect = 2e-17
Identities = 150/212 (71%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825
||||| || |||| || ||| ||||| ||||| ||||| || | | |||| ||||
Sbjct 840 AGGACGAGATGAAGCGTCGACTCTTTCTGGATGTTGTAGTCGGACAAGGTGCGACCATCT 899
Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885
|| || ||||| ||||||||||| ||||| ||||||||| | || | || ||||||||
Sbjct 900 TCAAGCTGCTTGCCGGCGAAGATGAGTCGCTGCTGGTCTGGTGGAATACCTTCCTTGTCT 959
Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945
| || || || ||| | || | || ||| || || |||| || || |||
Sbjct 960 TGGATCTTAGCCTTCACGTTGTCGATAGTGTCCGAGGCTTCAACTTCAAGCGTGATCGTC 1019
Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977
|| || || | ||||| || |||||||||||
Sbjct 1020 TTGCCGGTTAAAGTCTTGACGAAGATCTGCAT 1051
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 325687798579940
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