Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oikopleura_20dioica_20[genbank_20GCA_5F000209535.1_202010-12-02] 1,260 sequences; 70,471,451 total letters Query= NC_023549.1 Length=56789 Score E Sequences producing significant alignments: (Bits) Value seq522 80.6 1e-10 >seq522 Length=2018 Score = 80.6 bits (88), Expect = 1e-10 Identities = 64/76 (84%), Gaps = 2/76 (3%) Strand=Plus/Minus Query 50108 TGGTTGCGGAGGCGGGATTTGAACCCGCGGCCTCCAGGATATGAGCCTGGCGAGCTACCG 50167 |||||||||||| | || | |||| | || |||| ||| ||||||||| |||||||||| Sbjct 1757 TGGTTGCGGAGGTGTGAATCGAACACACGACCTCAAGGTTATGAGCCTTGCGAGCTACC- 1699 Query 50168 AACTGCTCTACTCCGC 50183 ||||||||||||||| Sbjct 1698 -ACTGCTCTACTCCGC 1684 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 181600482762120