Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oikopleura_20dioica_20[genbank_20GCA_5F000209535.1_202010-12-02] 1,260 sequences; 70,471,451 total letters Query= NC_026268.1 Length=139132 Score E Sequences producing significant alignments: (Bits) Value seq355 82.4 7e-11 >seq355 Length=2689 Score = 82.4 bits (90), Expect = 7e-11 Identities = 137/198 (69%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 25174 CATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAAGCCAA 25233 |||||| | ||||| || || | ||||| ||| | ||||| |||| ||||| || Sbjct 2144 CATGCAGATCTTTGTCAAGACTCTCACCGGCAAAACCATCACTCTCGAGGTCGAGGCTTC 2085 Query 25234 CGATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCCCGATCA 25293 || || |||||| | || ||| || || || || || ||||| ||||| || || Sbjct 2084 TGACACCATCGAGAATGTCAAAGCCAAGATCCAGGACAAGGAAGGTATCCCGCCAGACCA 2025 Query 25294 GCAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAATGTCAGCGATTACAA 25353 ||| ||||||| | | |||||| || || || |||| ||| | | || ||||| Sbjct 2024 GCAGCGACTCATCTTTGCCGGCAAGCAGCTTGAGGATGGCCGAACTCTTTCTGACTACAA 1965 Query 25354 TATTCAAAAAGAATCCAC 25371 ||||||||||| || || Sbjct 1964 CATTCAAAAAGAGTCTAC 1947 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445087389763200