Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oikopleura_20dioica_20[genbank_20GCA_5F000209535.1_202010-12-02] 1,260 sequences; 70,471,451 total letters Query= NC_031129.1 Length=103445 Score E Sequences producing significant alignments: (Bits) Value seq685 91.5 1e-13 >seq685 Length=65961 Score = 91.5 bits (100), Expect = 1e-13 Identities = 64/73 (88%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 99544 TGGTGCCGATTAACGGACTCGAACCGCTGACATCCTGCTTACAAGGCAGGCGCTCTACCA 99603 ||||| | |||||||| |||||||| |||||| |||||| ||| |||| |||||||||| Sbjct 65509 TGGTGGAGGTTAACGGATTCGAACCGTTGACATTCTGCTTGCAAAGCAGACGCTCTACCA 65450 Query 99604 ACTGAGCTAAACC 99616 ||||||||||||| Sbjct 65449 ACTGAGCTAAACC 65437 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 330894118629160