Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Oikopleura_20dioica_20[genbank_20GCA_5F000209535.1_202010-12-02] 1,260 sequences; 70,471,451 total letters Query= NC_031935.1 Length=186386 Score E Sequences producing significant alignments: (Bits) Value seq685 93.3 5e-14 >seq685 Length=65961 Score = 93.3 bits (102), Expect = 5e-14 Identities = 65/74 (88%), Gaps = 0/74 (0%) Strand=Plus/Plus Query 17858 AGGGGAATTAGCTCAGTTGGTAGAGCGCCTGCTTTGCAAGCAGGATGTCAGCGGTTCGAG 17917 ||||| |||||||||||||||||||| ||||||||||||||| |||||| |||||||| Sbjct 65433 AGGGGGTTTAGCTCAGTTGGTAGAGCGTCTGCTTTGCAAGCAGAATGTCAACGGTTCGAA 65492 Query 17918 TCCGCTATTCTCCA 17931 |||| || ||||| Sbjct 65493 TCCGTTAACCTCCA 65506 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596297808161600