Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ophionereis_20fasciata_20[genbank_20GCA_5F900067615.1_202017-02-27] 3,968,282 sequences; 1,184,528,790 total letters Query= NC_000852.5 Length=330611 Score E Sequences producing significant alignments: (Bits) Value seq369660 100 6e-16 >seq369660 Length=5115 Score = 100 bits (110), Expect = 6e-16 Identities = 249/371 (67%), Gaps = 8/371 (2%) Strand=Plus/Minus Query 61084 TTTGTCAAGCATCAACATCTGAACTGTATGGAAAAGTTCAAGAAATTCCTCAAACAGAAA 61143 ||| ||||||| | || ||| ||| ||| |||||||| ||||| || || | ||||| Sbjct 3738 TTTATCAAGCAGGTTCTTCGGAAATGTTTGGGAAAGTTCAGGAAATCCCCCAGAAAGAAA 3679 Query 61144 GGACTCCGTTTTATCCTCGTAGCCCGTATGGTGTTGCAAAACTATACGCTTACTGG--AT 61201 || || ||||| |||||||| || |||| | ||| || | |||| ||||| | Sbjct 3678 CTACACCTTTTTACCCTCGTAGTCCCTATGCTTGTGCGAAGGTTTACGGACACTGGCAAA 3619 Query 61202 TTGTAAAAATTACCGCGAGTCGTATGGAATGTTTGTATGTAACTCGATT-TGTTTCAATC 61260 || || ||| || || || || || | |||| ||||| || ||||| |||| Sbjct 3618 CGGTTAA--TTATCGGGAATCTTACGGTTTATTTGCCTGTAATGGTATCCTGTTT-AATC 3562 Query 61261 ACGAGAGTCCCAATAGAGGTCATCAGTTTGTGACTCGTAAAATTACGAAGGCGGTTGCAA 61320 | || |||||| | |||| ||||| || || |||||||| || || || | Sbjct 3561 ATGAAAGTCCCCGCCGTGGTCCGACTTTTGTTACCCGCAAAATTACCCGCGCTGTAGCCA 3502 Query 61321 ATATTTTTAACGGTGTCGAAAAATGCA-TGTATCTAGGAAACATAGACTCTAAAAGAGAT 61379 ||| | || || | | | || | | | ||||| || || | || | ||| | || Sbjct 3501 GGATTGTGAAGGGAAT-GCAGAAGGAACTTTATCTGGGTAATCTGGATGCAAAACGGGAC 3443 Query 61380 TGGGGATATGCGGAAGATTATATCGAGGCTATGTGGTTGATGTTGCAACAAGATACTCCA 61439 ||||| ||||| | |||||| | || |||||| ||||||||||||| ||| || Sbjct 3442 TGGGGTTATGCTAAGGATTATGTGCGGGGAATGTGGATGATGTTGCAACATGATCAACCG 3383 Query 61440 GATGACTACGT 61450 ||||| || || Sbjct 3382 GATGATTATGT 3372 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1004040405789660