Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ophionereis_20fasciata_20[genbank_20GCA_5F900067615.1_202017-02-27] 3,968,282 sequences; 1,184,528,790 total letters Query= NC_001132.2 Length=161773 Score E Sequences producing significant alignments: (Bits) Value seq456579 232 7e-56 seq760737 196 5e-45 seq2673866 89.7 5e-13 seq942746 87.8 2e-12 seq668569 86.0 6e-12 >seq456579 Length=1737 Score = 232 bits (256), Expect = 7e-56 Identities = 424/619 (68%), Gaps = 8/619 (1%) Strand=Plus/Minus Query 16924 TTCCTCGGACGGTGTATGTTTAAGATGTTTAAACATCAGACATGCGAAATCGCAATGTAA 16983 ||| ||||| ||| | |||| | || |||| | ||| |||||||| || ||||| Sbjct 1123 TTCTTCGGAAGGTTTTTGTTCGATATACGAGAACAATAAACAAGCGAAATCACAGTGTAA 1064 Query 16984 TCCCTCGTCTCTGCTGATAAGTTCGTTAGAAAATGTCAACCCGGGCATCTTTCCTCGTTT 17043 ||||||| | |||||| |||||||| || || |||| ||||||||| || | ||| Sbjct 1063 CGCCTCGTCGCGGCTGATGAGTTCGTTGGAGAAGGTCAGACCGGGCATCAGACCCCTTTT 1004 Query 17044 CTTTAACCAAAATATCGCGGCGAACGACCCAGAAAAGAATATACCCTCGACGGATGCAAA 17103 ||| ||||| ||||||||||||||||| || |||||||| || || |||||| || || Sbjct 1003 CTTCAACCAGAATATCGCGGCGAACGATCCGGAAAAGAAAATTCCTTCGACGATGGCGAA 944 Query 17104 CGCGATTAATCGTTCGGCGTACGTCGCGTCTTTGTTACGAATCCATTTCTGCACCCACTC 17163 |||| | || |||| | | || | | | |||||| || | |||| || Sbjct 943 AGCGACGAGTCTCGTGGCGAAAGAGGCTCGACTATCATTGATCCATCTCAGGGCCCAGTC 884 Query 17164 GGCTTTTTGCTTTATGCAATCC----ATCGTTTCTATGGCCTTAAATAATTTCTCTTTTT 17219 |||||| |||| | || | || ||||| || || || | || | ||||| Sbjct 883 GGCTTT---CTTT-TTCACCGCGGGAATAGTTTCAATCGCTTTGAGCAAATATCGTTTTT 828 Query 17220 CCTGTAGGTCGATTATATACGTATCGATGAGTAGGCTGTACATTTCGGAGTGTATGTTCT 17279 | || || || || ||||| ||||| |||| ||||||||| ||||| ||||| | Sbjct 827 CGCGTGAATCCTGGATGTAGGTATCTATGAGAAGGCCGTACATTTCCGAGTGGATGTTTT 768 Query 17280 CCATGGCTATCTGAAATCCGTAAAAGCATCGGGCTTCCGCTATTTGAACTTCCACGTAGA 17339 |||| |||||||| ||||||||| | || ||||| | || || |||||| | | Sbjct 767 CCATCATGATCTGAAACCCGTAAAAGAACCGCGCTTCTGGAATCTGGACTTCCCTACAAA 708 Query 17340 ATCGTTCCGCTAGATTTTCGTTCACGATGCCGTCGCTCGCGGCGAAAAACGCCAATATAT 17399 | ||| ||| ||||||||| ||||| |||||||| | |||||||| || | || | Sbjct 707 ACCGTGTCGCCAGATTTTCGACAACGATCCCGTCGCTTCCCGCGAAAAAGGCGAGGATGT 648 Query 17400 GCTTAATGAAATATTTTTCGTCCGGTGTAAGAACGCGCCAGTCCTTTAAATCTTTGGATA 17459 | ||||||||||| ||| | | ||| ||| | | |||||||| | Sbjct 647 GGGAGATGAAATATTTCTCGCCGTCATTGAGACTTTCCCAATGGGGTTTATCTTTGGCGA 588 Query 17460 TATCCACTTCTTCGGGGGTCCAAAAACTAGCCACTGCCTTTTTATACATATTCCAAATAT 17519 ||| || || | | ||||||||| |||| | || || ||||| ||||| | || Sbjct 587 GATCAACCTCAGCCGTCGTCCAAAAAGAAGCCTCCGCTCGCTTGTACATTTTCCACACAT 528 Query 17520 CATTGTATTGTATGGGGAA 17538 | | ||||||||| ||||| Sbjct 527 CTTCGTATTGTATCGGGAA 509 >seq760737 Length=2966 Score = 196 bits (216), Expect = 5e-45 Identities = 583/885 (66%), Gaps = 26/885 (3%) Strand=Plus/Minus Query 16674 TTTGGTAATCGCTAACGCGTTTTTCGAAAAAGTTAGTTTTGCCCTCTAGAGATATATTCT 16733 ||||||| |||| ||| | |||||| |||||||||| ||| || || | || ||||| | Sbjct 1539 TTTGGTACTCGCCAACTCTTTTTTCAAAAAAGTTAGATTTCCCTTCAATTGAAATATTAT 1480 Query 16734 CCATGAAATCAAAAGGATTAGTAGCTGAAAATA---TTTTAGAGTACCCCAGTTCGGCGA 16790 |||| || ||||| || || |||| ||||| ||||| | |||| ||| | | Sbjct 1479 CCATAAAGTCAAACGGGTTTTTAGCGCGAAATAACTTTTTACAA---CCCAATTCTACAA 1423 Query 16791 TTAATCTATCCGCTACAAATTCTATATATTGGCACATTAATTCGCAGTTCATTCCTATAA 16850 | | || || |||||||||||||| || ||| | || |||||||| || | Sbjct 1422 GAAGACGGTCTGCCACAAATTCTATATACTGTTTCATAAGATCTTTATTCATTCCAATCA 1363 Query 16851 GACGTACCGGAAGAGCTT-CCGTC----AAAAATCGTTGCTCTATAACAACCGCTTCCTT 16905 ||| || | |||| ||||||| || || ||| | || || || Sbjct 1362 TTTTATTCGG----GCATGCCGTTTCAAAAAAATCTTTT-TCGATATCGACTGCGTCACC 1308 Query 16906 AATAATACTAGCAACTCGTTCCT-CGGACGGTGTATGTTT-AAGA--TGTTTAAACATCA 16961 || ||| | | || | | | | |||| | ||||| ||| | | |||||| | Sbjct 1307 AACAATTTT-GTAAATGATGGATTCATTCGGTTTTTGTTTTAAGCACTCTCTAAACACAA 1249 Query 16962 GACATGCGAAATCGCAATGTAATCCCTCGTCTCTGCTGATAAGTTCGTTAGAAAATGTCA 17021 | || | |||||||||||||| || |||||||| || | |||||| ||||| || | Sbjct 1248 GGCAAGAAAAATCGCAATGTAAGCCTTCGTCTCTAGAAATTAATTCGTTTGAAAAAGTGA 1189 Query 17022 ACCCGGGCATCTTTCCTCGTTTCTTTAACCAAAATATCGCGGCGAACGACCCAGAAAAGA 17081 || || | | |||| || || | |||||||||||| ||||| || ||| |||| | Sbjct 1188 GTCCTGGAAGCAACCCTCTCTTTTTCAGCCAAAATATCGCAGCGAATGATCCACAAAAAA 1129 Query 17082 ATATACCCTCGACGGATGCAAACGCGATTAATCGTTCGGCGTACGTCGCGTCTTTGTTAC 17141 | || || || || ||||||| |||||||| | || || | | || | | | Sbjct 1128 AAATGCCTTCTACACATGCAAAAGCGATTAACCTCTCTGCAAATGAGTTATCA--GATGC 1071 Query 17142 GAATCCATTTCTGCA-CCCACTCGGCTTTTTGCTTTATGCAATCCATCGTTTCTATGGCC 17200 |||||| || | |||| || || || | || | |||| | |||||| || || Sbjct 1070 -AATCCAAG-CTAAAGCCCAATCAGCCTTCTTTTTAACGCAAGGTAACGTTTCGATCGCG 1013 Query 17201 TTAAATAATTTCTCTTTTTCCTGTAGGTCGATTATATACGTATCGATGAGTAGGCTGTAC 17260 ||||| | | |||||| | | ||| | ||||| || || || | | ||| ||| Sbjct 1012 TTAAAAAGACACATTTTTTCATCTTCGTCTTTGATATAAGTTTCAATTAACAAGCTATAC 953 Query 17261 ATTTCGGAGTGTATGTTCTCCATGGCTATCTGAAATCCGTAAAAGCATCGGGCTTCCGCT 17320 ||||| | || || || ||||| || |||||||| || ||||||||| ||| || Sbjct 952 ATTTCCGTATGAATATTTTCCATCGCAATCTGAAAGCCATAAAAGCATTTTATTTCTGCA 893 Query 17321 ATTTGAACTTCCACGTAGAATCGTTCCGCTAGATTTTCGTTCACGATGCCGTCGCTCGCG 17380 ||||||||||| | | ||||| | ||| |||||| || |||| || Sbjct 892 ATTTGAACTTCGGCTAAAAATCGCTGGACTATATTTTCTAATACAATGCAATCAGCATTT 833 Query 17381 GCGAAAAACGCCAATATATGCTTAATGAAATATTTTTCGTCCGGTGTAAGAACGCGCCAG 17440 || || || || ||||| | ||| ||||| ||||| || | || | | |||| Sbjct 832 GCAAAGAAAGCTAATATGTACTTGATGAATGTCTTTTCATCTGTAGTTAATTGGTACCAG 773 Query 17441 TCCTTTAAATCTTTGGATATATCCACTTCTTCGGGGGTCCAAAAACTAGCCACTGCCTTT 17500 || | |||||| || | || ||| ||||| | |||||||| |||| ||| ||| Sbjct 772 TCTTGTAAATCCTTTGTTAAATCAACTTCATTAACTGTCCAAAATGAAGCCTGTGCTTTT 713 Query 17501 TTATACATATTCCAAATATCATTGTATTGTATGGGGAATACAACA 17545 |||||||| |||||| | || |||||||| || |||| |||| Sbjct 712 TTATACATTGTCCAAAATTTATCATATTGTATTGGAAATAGAACA 668 >seq2673866 Length=129 Score = 89.7 bits (98), Expect = 5e-13 Identities = 64/74 (86%), Gaps = 0/74 (0%) Strand=Plus/Plus Query 17234 ATATACGTATCGATGAGTAGGCTGTACATTTCGGAGTGTATGTTCTCCATGGCTATCTGA 17293 || || || ||||||||||| ||||||||||| ||||| |||||||||||||| ||||| Sbjct 3 ATGTATGTGTCGATGAGTAGACTGTACATTTCTGAGTGGATGTTCTCCATGGCAATCTGG 62 Query 17294 AATCCGTAAAAGCA 17307 || || |||||||| Sbjct 63 AAGCCATAAAAGCA 76 >seq942746 Length=519 Score = 87.8 bits (96), Expect = 2e-12 Identities = 92/121 (76%), Gaps = 0/121 (0%) Strand=Plus/Minus Query 16986 CCTCGTCTCTGCTGATAAGTTCGTTAGAAAATGTCAACCCGGGCATCTTTCCTCGTTTCT 17045 |||||||||||||||| ||||| || || || ||||| || ||||| || | |||| Sbjct 373 CCTCGTCTCTGCTGATGAGTTCATTGGAGAAAGTCAAACCAGGCATAAGACCCCTCTTCT 314 Query 17046 TTAACCAAAATATCGCGGCGAACGACCCAGAAAAGAATATACCCTCGACGGATGCAAACG 17105 ||| ||| || || || || || ||||| || ||||| |||||||| || | ||||| | Sbjct 313 TTAGCCAGAAGATGGCAGCAAAAGACCCTGAGAAGAAGATACCCTCTACAGCAGCAAAAG 254 Query 17106 C 17106 | Sbjct 253 C 253 >seq668569 Length=2433 Score = 86.0 bits (94), Expect = 6e-12 Identities = 104/139 (75%), Gaps = 2/139 (1%) Strand=Plus/Minus Query 16690 GCGTTTTTCGAAAAAGTTAGTTTTGCCCTCTAGAGATATATTCTCCATGAAATCAAAAGG 16749 |||||| |||||||||||| | ||| | || ||||| ||||||||||||||||||||||| Sbjct 143 GCGTTTCTCGAAAAAGTTACTCTTGTCTTCCAGAGAGATATTCTCCATGAAATCAAAAGG 84 Query 16750 ATT-AGTAGCTGAAAATATTTTAGAGTACCCCAGTTCGGCGATTAATCTATCCGCTACAA 16808 ||| | | || ||| | |||| || | ||||| | | ||| ||||| |||| Sbjct 83 ATTCTGAATGTGGTAAT-TCTTAGTGTCAACAAGTTCTAGCAAGAGTCTGTCCGCGACAA 25 Query 16809 ATTCTATATATTGGCACAT 16827 |||| || || || | ||| Sbjct 24 ATTCGATGTACTGACCCAT 6 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 491873513891760