Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ophionereis_20fasciata_20[genbank_20GCA_5F900067615.1_202017-02-27] 3,968,282 sequences; 1,184,528,790 total letters Query= NC_001266.1 Length=159857 Score E Sequences producing significant alignments: (Bits) Value seq760737 206 3e-48 seq456579 196 5e-45 seq942746 118 1e-21 seq3830724 96.9 3e-15 seq805419 91.5 1e-13 seq3953357 86.0 6e-12 seq2673866 82.4 7e-11 >seq760737 Length=2966 Score = 206 bits (228), Expect = 3e-48 Identities = 578/878 (66%), Gaps = 22/878 (3%) Strand=Plus/Minus Query 15912 TTTGGTAATCACTAACGCGTTTTTCGAAGAAGTTAGTTTTTCCCTCTAAAGATATATTTT 15971 ||||||| || | ||| | |||||| || ||||||| ||| || || | || ||||| | Sbjct 1539 TTTGGTACTCGCCAACTCTTTTTTCAAAAAAGTTAGATTTCCCTTCAATTGAAATATTAT 1480 Query 15972 CCATAAAATCAAAGGGATTAGTAGCTGAAAATATCTTAGAGTACCCCAGTTCCGTAACTA 16031 ||||||| ||||| || || |||| ||||| ||| | |||| ||| || | Sbjct 1479 CCATAAAGTCAAACGGGTTTTTAGCGCGAAATAACTTTTTACAACCCAATTCTACAAGAA 1420 Query 16032 ATCTATCTGCTACAAATTCTATATATTGACACATTAAGTCGCAATTAATTCCTATAAGTC 16091 | ||||| |||||||||||||| || ||| | || ||| ||||| || | | Sbjct 1419 GACGGTCTGCCACAAATTCTATATACTGTTTCATAAGATCTTTATTCATTCCAATCATTT 1360 Query 16092 GTACCGGAAGAGCTTTTGTTAAAAATTGTTGTTCTATCACAACCGCTTCTTTAATGATAT 16151 ||| || || ||||| | || ||| || | || || || || || | Sbjct 1359 TATTCGGGCATGCCGTTTCAAAAAAATCTTTTTCGATATCGACTGCGTCACCAACAATTT 1300 Query 16152 CGGTGGCTCGTGT-TTCAGACGGTGTATGGTTTAGG---TGTTTAAACATTAGACACGCG 16207 | | | || |||| |||| | || |||| | | | |||||| || || | Sbjct 1299 TG-TAAATGATGGATTCATTCGGTTTTTGTTTTAAGCACTCTCTAAACACAAGGCAAGAA 1241 Query 16208 AAGTCGCAATGTAGTCCTTCGTCTCTGCTGATAAGTTCGTTGGAAAAAGTTAACCCTGGC 16267 || |||||||||| ||||||||||| || | |||||| |||||||| | ||||| Sbjct 1240 AAATCGCAATGTAAGCCTTCGTCTCTAGAAATTAATTCGTTTGAAAAAGTGAGTCCTGGA 1181 Query 16268 ATTTTTCCTCGTTTCTTTAACCAGAATATCGCAGCAAATGACCCCGAAAAGAATATACCC 16327 | |||| || || | ||| ||||||||||| ||||| || |||| || || || Sbjct 1180 AGCAACCCTCTCTTTTTCAGCCAAAATATCGCAGCGAATGATCCACAAAAAAAAATGCCT 1121 Query 16328 TCAACAGATGCAAAAGCGATTAATCGTTCCGCGTACGTAGCATCTTTATTA---CGAATC 16384 || ||| |||||||||||||||| | || || | | || |||| | |||| Sbjct 1120 TCTACACATGCAAAAGCGATTAACCTCTCTGCAAATG-AG-----TTATCAGATGCAATC 1067 Query 16385 CATTTCTGTA-CCCATTCGGCTTTTTGTTTTATACAATCCATCGTTTCTATGGCCTTAAA 16443 || || | |||| || || || | ||| | ||| | |||||| || || ||||| Sbjct 1066 CA-AGCTAAAGCCCAATCAGCCTTCTTTTTAACGCAAGGTAACGTTTCGATCGCGTTAAA 1008 Query 16444 CAATTTCTCTTTTTCCTGAATATCGATTATATACGTATCAATCAGTAAACTGTACATTTC 16503 | | |||||| | || | ||||| || ||||| | || || |||||||| Sbjct 1007 AAGACACATTTTTTCATCTTCGTCTTTGATATAAGTTTCAATTAACAAGCTATACATTTC 948 Query 16504 TGAGTGTATGTTCTCTATGGCTATCTGAAATCCATAGAAGCATCGAGCCTCCGCTATTTG 16563 | || || || || || || |||||||| ||||| |||||| || || ||||| Sbjct 947 CGTATGAATATTTTCCATCGCAATCTGAAAGCCATAAAAGCATTTTATTTCTGCAATTTG 888 Query 16564 TACTTCCACGTAAAATCGTTCCGCCAGGTTCTCATTCACGATACCGTCACTTGCA---GC 16620 ||||| | ||||||| | | | || || || || | ||| ||| || Sbjct 887 AACTTCGGCTAAAAATCGCTGGACTATATTTTCTAATACAATGCAATCA---GCATTTGC 831 Query 16621 AAAAAACGCCAATATGTGCTTAATGAAATATTTTTCGTCAGATGTAAGAATATGCCAATC 16680 ||| || || ||||||| ||| ||||| ||||| || | || | | ||| || Sbjct 830 AAAGAAAGCTAATATGTACTTGATGAATGTCTTTTCATCTGTAGTTAATTGGTACCAGTC 771 Query 16681 TTTTAAATCTTTGGATATATCCACTTCTTCTGGCGTCCAAAAGCTAGCCACTGCCTTTTT 16740 || |||||| || | || ||| ||||| | |||||||| |||| ||| ||||| Sbjct 770 TTGTAAATCCTTTGTTAAATCAACTTCATTAACTGTCCAAAATGAAGCCTGTGCTTTTTT 711 Query 16741 ATACATTTTCCAAATATCATTGTATTGTATGGGAAATA 16778 ||||||| |||||| | || |||||||| ||||||| Sbjct 710 ATACATTGTCCAAAATTTATCATATTGTATTGGAAATA 673 >seq456579 Length=1737 Score = 196 bits (216), Expect = 5e-45 Identities = 403/597 (68%), Gaps = 2/597 (0%) Strand=Plus/Minus Query 16193 AACATTAGACACGCGAAGTCGCAATGTAGTCCTTCGTCTCTGCTGATAAGTTCGTTGGAA 16252 |||| || ||| ||||| || || |||| | ||||| | |||||| ||||||||||| Sbjct 1092 AACAATAAACAAGCGAAATCACAGTGTAACGCCTCGTCGCGGCTGATGAGTTCGTTGGAG 1033 Query 16253 AAAGTTAACCCTGGCATTTTTCCTCGTTTCTTTAACCAGAATATCGCAGCAAATGACCCC 16312 || || | || ||||| || | |||||| |||||||||||||| || || || || Sbjct 1032 AAGGTCAGACCGGGCATCAGACCCCTTTTCTTCAACCAGAATATCGCGGCGAACGATCCG 973 Query 16313 GAAAAGAATATACCCTCAACAGATG-CAAAAGCGATTAATCGTTCCGCGTACGTAGCATC 16371 |||||||| || || || || |||| | ||||||| | || ||| | | || Sbjct 972 GAAAAGAAAATTCCTTCGAC-GATGGCGAAAGCGACGAGTCTCGTGGCGAAAGAGGCTCG 914 Query 16372 TTTATTACGAATCCATTTCTGTACCCATTCGGCTTTTTGTTTTATACAATCCATCGTTTC 16431 ||| | |||||| || | |||| |||||||| | ||| | || ||||| Sbjct 913 ACTATCATTGATCCATCTCAGGGCCCAGTCGGCTTTCTTTTTCACCGCGGGAATAGTTTC 854 Query 16432 TATGGCCTTAAACAATTTCTCTTTTTCCTGAATATCGATTATATACGTATCAATCAGTAA 16491 || || || | ||| | |||||| | ||| || || ||||| || || | Sbjct 853 AATCGCTTTGAGCAAATATCGTTTTTCGCGTGAATCCTGGATGTAGGTATCTATGAGAAG 794 Query 16492 ACTGTACATTTCTGAGTGTATGTTCTCTATGGCTATCTGAAATCCATAGAAGCATCGAGC 16551 | ||||||||| ||||| ||||| || || |||||||| || || ||| | || || Sbjct 793 GCCGTACATTTCCGAGTGGATGTTTTCCATCATGATCTGAAACCCGTAAAAGAACCGCGC 734 Query 16552 CTCCGCTATTTGTACTTCCACGTAAAATCGTTCCGCCAGGTTCTCATTCACGATACCGTC 16611 || | || || |||||| |||| ||| |||||| || || ||||| ||||| Sbjct 733 TTCTGGAATCTGGACTTCCCTACAAAACCGTGTCGCCAGATTTTCGACAACGATCCCGTC 674 Query 16612 ACTTGCAGCAAAAAACGCCAATATGTGCTTAATGAAATATTTTTCGTCAGATGTAAGAAT 16671 ||| | || ||||| || | ||||| ||||||||||| ||| | | ||| | Sbjct 673 GCTTCCCGCGAAAAAGGCGAGGATGTGGGAGATGAAATATTTCTCGCCGTCATTGAGACT 614 Query 16672 ATGCCAATCTTTTAAATCTTTGGATATATCCACTTCTTCTGGCGTCCAAAAGCTAGCCAC 16731 | ||||| | |||||||| | ||| || || | | ||||||||| |||| | Sbjct 613 TTCCCAATGGGGTTTATCTTTGGCGAGATCAACCTCAGCCGTCGTCCAAAAAGAAGCCTC 554 Query 16732 TGCCTTTTTATACATTTTCCAAATATCATTGTATTGTATGGGAAATACGACGTATCT 16788 || || ||||||||||| | ||| | ||||||||| || || | |||| |||| Sbjct 553 CGCTCGCTTGTACATTTTCCACACATCTTCGTATTGTATCGGGAAAATGACGAATCT 497 >seq942746 Length=519 Score = 118 bits (130), Expect = 1e-21 Identities = 139/188 (74%), Gaps = 0/188 (0%) Strand=Plus/Minus Query 16226 TCGTCTCTGCTGATAAGTTCGTTGGAAAAAGTTAACCCTGGCATTTTTCCTCGTTTCTTT 16285 |||||||||||||| ||||| ||||| ||||| || || ||||| || | |||||| Sbjct 371 TCGTCTCTGCTGATGAGTTCATTGGAGAAAGTCAAACCAGGCATAAGACCCCTCTTCTTT 312 Query 16286 AACCAGAATATCGCAGCAAATGACCCCGAAAAGAATATACCCTCAACAGATGCAAAAGCG 16345 | |||||| || |||||||| ||||| || ||||| |||||||| |||| |||||||| Sbjct 311 AGCCAGAAGATGGCAGCAAAAGACCCTGAGAAGAAGATACCCTCTACAGCAGCAAAAGCA 252 Query 16346 ATTAATCGTTCCGCGTACGTAGCATCTTTATTACGAATCCATTTCTGTACCCATTCGGCT 16405 | | || ||| | || || |||| | | ||||| || || |||| ||||| Sbjct 251 ACCACTCTTTCACCATAGGTGGCATTGTCAGAGTTGATCCAGTTGAGTGCCCAGTCGGCC 192 Query 16406 TTTTGTTT 16413 || ||||| Sbjct 191 TTCTGTTT 184 >seq3830724 Length=343 Score = 96.9 bits (106), Expect = 3e-15 Identities = 106/141 (75%), Gaps = 0/141 (0%) Strand=Plus/Plus Query 16193 AACATTAGACACGCGAAGTCGCAATGTAGTCCTTCGTCTCTGCTGATAAGTTCGTTGGAA 16252 |||| | ||| || || || || || | |||||||| | ||||| |||||||||||| Sbjct 200 AACAGCAAACAGGCAAAATCACAGTGCAACCCTTCGTCGCGACTGATGAGTTCGTTGGAA 259 Query 16253 AAAGTTAACCCTGGCATTTTTCCTCGTTTCTTTAACCAGAATATCGCAGCAAATGACCCC 16312 || || || || ||||| ||||||||| || | ||| ||||| || || || || ||| Sbjct 260 AACGTCAATCCCGGCATCAATCCTCGTTTTTTCATCCACAATATGGCGGCGAAAGAACCC 319 Query 16313 GAAAAGAATATACCCTCAACA 16333 ||||| |||| ||| || ||| Sbjct 320 GAAAAAAATACACCTTCTACA 340 >seq805419 Length=1311 Score = 91.5 bits (100), Expect = 1e-13 Identities = 112/153 (73%), Gaps = 0/153 (0%) Strand=Plus/Plus Query 16192 AAACATTAGACACGCGAAGTCGCAATGTAGTCCTTCGTCTCTGCTGATAAGTTCGTTGGA 16251 ||||| |||| || ||| |||| || | || ||||||||| ||| || |||||||| Sbjct 1070 AAACACATGACAGGCAAAGCCGCAGTGCATGCCATCGTCTCTGGAGATGAGCTCGTTGGA 1129 Query 16252 AAAAGTTAACCCTGGCATTTTTCCTCGTTTCTTTAACCAGAATATCGCAGCAAATGACCC 16311 ||| | | || |||| || |||||||| | |||||||||||| ||||| || Sbjct 1130 AAAGGACAGACCCGGCACGAGACCGCGTTTCTTGAGCCAGAATATCGCCGCAAAGCTTCC 1189 Query 16312 CGAAAAGAATATACCCTCAACAGATGCAAAAGC 16344 |||||| || || ||||| |||| ||||| || Sbjct 1190 CGAAAAAAAGATGCCCTCGACAGCGGCAAAGGC 1222 >seq3953357 Length=757 Score = 86.0 bits (94), Expect = 6e-12 Identities = 107/147 (73%), Gaps = 0/147 (0%) Strand=Plus/Plus Query 16201 ACACGCGAAGTCGCAATGTAGTCCTTCGTCTCTGCTGATAAGTTCGTTGGAAAAAGTTAA 16260 ||| || |||||||| || ||||||||||| ||| ||| |||||||||| ||| || | Sbjct 106 ACAAGCAAAGTCGCAGTGCAGTCCTTCGTCCCTGGAGATCAGTTCGTTGGCAAAGGTGAT 165 Query 16261 CCCTGGCATTTTTCCTCGTTTCTTTAACCAGAATATCGCAGCAAATGACCCCGAAAAGAA 16320 || || | | |||| || || | |||||| || || ||||| || || || ||||| Sbjct 166 GCCCGGAAGGATCCCTCTCTTTTTGATCCAGAAGATGGCTGCAAAAGATCCAGAGAAGAA 225 Query 16321 TATACCCTCAACAGATGCAAAAGCGAT 16347 || || || || | ||||| || || Sbjct 226 GATCCCTTCCACGGCGGCAAATGCAAT 252 >seq2673866 Length=129 Score = 82.4 bits (90), Expect = 7e-11 Identities = 68/83 (82%), Gaps = 0/83 (0%) Strand=Plus/Plus Query 16472 ATATACGTATCAATCAGTAAACTGTACATTTCTGAGTGTATGTTCTCTATGGCTATCTGA 16531 || || || || || |||| |||||||||||||||||| |||||||| ||||| ||||| Sbjct 3 ATGTATGTGTCGATGAGTAGACTGTACATTTCTGAGTGGATGTTCTCCATGGCAATCTGG 62 Query 16532 AATCCATAGAAGCATCGAGCCTC 16554 || ||||| ||||| | ||||| Sbjct 63 AAGCCATAAAAGCACCTTGCCTC 85 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 486046443024240