Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ophionereis_20fasciata_20[genbank_20GCA_5F900067615.1_202017-02-27] 3,968,282 sequences; 1,184,528,790 total letters Query= NC_001611.1 Length=185578 Score E Sequences producing significant alignments: (Bits) Value seq760737 327 1e-84 seq456579 179 4e-40 seq817554 116 4e-21 seq718041 102 9e-17 seq3830724 100 3e-16 seq3489149 91.5 2e-13 seq3878943 89.7 6e-13 seq780845 86.0 7e-12 >seq760737 Length=2966 Score = 327 bits (362), Expect = 1e-84 Identities = 612/893 (69%), Gaps = 11/893 (1%) Strand=Plus/Minus Query 23830 ACATAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTACCTT 23889 ||||||| || ||||||||| || || || | |||||| ||||| |||| ||| |||| Sbjct 1554 ACATAACCCCTGATTTTTGGTACTCGCCAACTCTTTTTTCAAAAAAGTTAGATTTCCCTT 1495 Query 23890 CTAATGATATATTTTCCATGAAATCGGATGGATTGGTAACATTATAGATTCTTTTAAATC 23949 | | ||| ||||| ||||| || || | || || || | | | | ||||| | | Sbjct 1494 CAATTGAAATATTATCCATAAAGTCAAACGGGTTTTTAGCGCGAAATAACTTTTTACAAC 1435 Query 23950 CCAATTCAGAAATCAATCTATCTGCGACAAACTCCATATATGTTTTCATCATTTCACAAT 24009 ||||||| || | | ||||| ||||| || ||||| |||||| | || || Sbjct 1434 CCAATTCTACAAGAAGACGGTCTGCCACAAATTCTATATACTGTTTCATAAGATCTTTAT 1375 Query 24010 TCATTCCTATAAGTTTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATAGAGACCG 24069 ||||||| || | |||| || ||| || ||| |||| ||| ||| ||| | Sbjct 1374 TCATTCCAATCATTTTATTCGGGCATGCCGTTTCAAAAAAATCTTTTTCGATATCGACTG 1315 Query 24070 CGTCTGTTATAATAGATCTTACTGTTTC-TTCACTCGGTG---GATACAATAAATGTTTA 24125 |||| | ||| | | | || | |||| ||||| | | || | | | || Sbjct 1314 CGTCACCAACAATTT-TGTAAATGATGGATTCATTCGGTTTTTGTTTTAAGCACTCTCTA 1256 Query 24126 AACATCAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAA 24185 |||| | || | |||||||| |||| || ||||||||| |||||||||||| ||| Sbjct 1255 AACACAAGGCAAGAAAAATCGCAATGTAAGCCTTCGTCTCTAGAAATTAATTCGTTTGAA 1196 Query 24186 AACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCA 24245 || |||||||| || | | || | |||||| ||||||||||| | || ||||||||| Sbjct 1195 AAAGTGAGTCCTGGAAGCAACCCTCTCTTTTTCAGCCAAAATATCGCAGCGAATGATCCA 1136 Query 24246 GAAAAGAAAATTCCTTCTACTGCCGCAAAGGCAATAAGTCTTTCTCCATAACCGGCGCTG 24305 |||| ||||| |||||||| ||||| || || | || ||| || | | | | Sbjct 1135 CAAAAAAAAATGCCTTCTACACATGCAAAAGCGATTAACCTCTCTGCAAA---TGAGTTA 1079 Query 24306 TC--ATG-TATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCT 24362 || ||| ||||| | ||||||||| ||||||||||| || ||||| | || || Sbjct 1078 TCAGATGCAATCCAAGCTAAAGCCCAATCAGCCTTCTTTTTAACGCAAGGTAACGTTTCG 1019 Query 24363 ATAGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCAATCAAAAGA 24422 || || ||||| ||| | ||||||||| ||||| | ||| || ||||| || | Sbjct 1018 ATCGCGTTAAAAAGACACATTTTTTCATCTTCGTCTTTGATATAAGTTTCAATTAACAAG 959 Query 24423 CTATACATTTCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAACATCTAGCC 24482 ||||||||||||| |||||| ||||| || || || ||||| || || || ||| | Sbjct 958 CTATACATTTCCGTATGAATATTTTCCATCGCAATCTGAAAGCCATAAAAGCATTTTATT 899 Query 24483 TCGGTAATCTGTACTTCTATACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCA 24542 || | ||| || ||||| ||||||| | ||| |||||| || || | ||| Sbjct 898 TCTGCAATTTGAACTTCGGCTAAAAATCGCTGGACTATATTTTCTAATACAATGCAATCA 839 Query 24543 CTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCTGGTGTTAGTTTA 24602 |||||| || || |||| | || || || ||||| |||| |||| || Sbjct 838 GCATTTGCAAAGAAAGCTAATATGTACTTGATGAATGTCTTTTCATCTGTAGTTAATTGG 779 Query 24603 TTCCAATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCT 24662 | ||| || | | ||| || | || ||| ||||| | |||||||||||||| |||| | Sbjct 778 TACCAGTCTTGTAAATCCTTTGTTAAATCAACTTCATTAACTGTCCAAAATGAAGCCTGT 719 Query 24663 GCCTTTTTATACATATTCCAGATGTCATGATATTGAATTGGAAAAATAACAAA 24715 || ||||||||||| |||| | | || |||||| |||||||| | |||||| Sbjct 718 GCTTTTTTATACATTGTCCAAAATTTATCATATTGTATTGGAAATAGAACAAA 666 >seq456579 Length=1737 Score = 179 bits (198), Expect = 4e-40 Identities = 400/598 (67%), Gaps = 7/598 (1%) Strand=Plus/Minus Query 24126 AACATCAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAA 24185 |||| ||||| |||||||| ||||||| ||||||| | || || | ||||||||| Sbjct 1092 AACAATAAACAAGCGAAATCACAGTGTAACGCCTCGTCGCGGCTGATGAGTTCGTTGGAG 1033 Query 24186 AACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCA 24245 || || || |||||||| || || | || || | ||| ||||| | || || ||||| Sbjct 1032 AAGGTCAGACCGGGCATCAGACCCCTTTTCTTCAACCAGAATATCGCGGCGAACGATCCG 973 Query 24246 GAAAAGAAAATTCCTTCTACTGCCGCAAAGGCAATAAGTCTTTCTCCATAACCGGC---G 24302 ||||||||||||||||| || || || || | ||||| | || ||| Sbjct 972 GAAAAGAAAATTCCTTCGACGATGGCGAAAGCGACGAGTCTCGTGGCGAAAGAGGCTCGA 913 Query 24303 CTGTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCT 24362 || |||| ||||| | | ||||| ||||| |||||||| || || || || || Sbjct 912 CTATCATTGATCCATCTCAGGGCCCAGTCGGCTTTCTTTTTCACCGCGGGAATAGTTTCA 853 Query 24363 ATAGCATTAA--AGAGATAGtttttttCATTACTATCTTTAACATATGTATCAATCAAAA 24420 || || || | | | || |||||| | | | ||| | | || ||||| || | || Sbjct 852 ATCGCTTTGAGCAAATATCGTTTTTCGCGTGA--ATCCTGGATGTAGGTATCTATGAGAA 795 Query 24421 GACTATACATTTCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAACATCTAG 24480 | | ||||||||||| || |||||||| || || ||||| ||||| || | | | Sbjct 794 GGCCGTACATTTCCGAGTGGATGTTTTCCATCATGATCTGAAACCCGTAAAAGAACCGCG 735 Query 24481 CCTCGGTAATCTGTACTTCTATACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGT 24540 | || | |||||| ||||| ||||||| ||| || | |||||| || || |||| Sbjct 734 CTTCTGGAATCTGGACTTCCCTACAAAACCGTGTCGCCAGATTTTCGACAACGATCCCGT 675 Query 24541 CACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCTGGTGTTAGTT 24600 | || | || ||||| || | | || || |||||||| ||| | | || Sbjct 674 CGCTTCCCGCGAAAAAGGCGAGGATGTGGGAGATGAAATATTTCTCGCCGTCATTGAGAC 615 Query 24601 TATTCCAATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCT 24660 | | ||||| ||||||| | | ||| || || || |||||||| || |||| Sbjct 614 TTTCCCAATGGGGTTTATCTTTGGCGAGATCAACCTCAGCCGTCGTCCAAAAAGAAGCCT 555 Query 24661 CTGCCTTTTTATACATATTCCAGATGTCATGATATTGAATTGGAAAAATAACAAATCT 24718 | || || ||||| ||||| | || | ||||| || || ||||| || ||||| Sbjct 554 CCGCTCGCTTGTACATTTTCCACACATCTTCGTATTGTATCGGGAAAATGACGAATCT 497 >seq817554 Length=629 Score = 116 bits (128), Expect = 4e-21 Identities = 142/191 (74%), Gaps = 2/191 (1%) Strand=Plus/Plus Query 24526 CATTCACTATTCCGTCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTT 24585 |||| || || |||||||| || ||||| || ||||| |||||| ||||| | | | Sbjct 265 CATTGACGATACCGTCACTAGCAGCAAAGAAGGCCAACACATGTGAGATAAAGTGCCTCT 324 Query 24586 CGTCTGGTGTT-AGTTTATTCCAATCATTGATATCTTTAGATATATCCACTTCTTCCACT 24644 ||| || || || || | ||| | || || ||||| |||| ||| || |||||||| Sbjct 325 CGT-TGTCATTCAGCTTCTCCCAGTGGTTCATGTCTTTGGATAGATCAACCTCTTCCACC 383 Query 24645 GTCCAAAATGATGCCTCTGCCTTTTTATACATATTCCAGATGTCATGATATTGAATTGGA 24704 ||||| ||||||||||||||||| || ||||| ||||||| || || |||| || || Sbjct 384 GTCCAGAATGATGCCTCTGCCTTCTTGTACATCATCCAGATATCTTGGAATTGGATGGGG 443 Query 24705 AAAATAACAAA 24715 || | ||||| Sbjct 444 AAGACGACAAA 454 >seq718041 Length=1499 Score = 102 bits (112), Expect = 9e-17 Identities = 152/212 (72%), Gaps = 8/212 (4%) Strand=Plus/Plus Query 54199 GTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGCACCATT 54258 |||||| |||||||| || || || ||||||||||| || | ||||| |||| |||||| Sbjct 391 GTATCTTGCGGTGTTGTTGTATACCCTCAACATTGGTATTAAGCCATTTGATGTACCATT 450 Query 54259 GGTCCCGGAGATATAGCTTCCACTGGCACGAAT--ATTACTAATTGATAGACCTATCCCC 54316 ||| || | |||||||||||| || | ||| | | |||| || |||| ||| Sbjct 451 GGTGCCAGCAATATAGCTTCCAGATGCTCTAATGCAGTGAACATTG--AGGCCTACACCC 508 Query 54317 CCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTA 54376 ||||| | || ||||| | ||||| | || | || || ||||| || |||||||| Sbjct 509 CCTGCTGTCTTTGAGATGAGGGCGCACTGCTTCAGTGTGTCGTAGATTCCTTCTATACTG 568 Query 54377 TC--ATCCATCATGTTAAGTAGAAAACAGCTA 54406 || || | |||| | || || ||||| ||| Sbjct 569 TCTGATGC--CATGGTGAGCAGGAAACAACTA 598 >seq3830724 Length=343 Score = 100 bits (110), Expect = 3e-16 Identities = 106/140 (76%), Gaps = 0/140 (0%) Strand=Plus/Plus Query 24126 AACATCAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAA 24185 |||| |||||| || ||||| ||||| | || ||||| | ||| || | |||||||||| Sbjct 200 AACAGCAAACAGGCAAAATCACAGTGCAACCCTTCGTCGCGACTGATGAGTTCGTTGGAA 259 Query 24186 AACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCA 24245 ||||| | ||| ||||| | || || ||||| | ||| ||||||| || || || || Sbjct 260 AACGTCAATCCCGGCATCAATCCTCGTTTTTTCATCCACAATATGGCGGCGAAAGAACCC 319 Query 24246 GAAAAGAAAATTCCTTCTAC 24265 ||||| || | |||||||| Sbjct 320 GAAAAAAATACACCTTCTAC 339 >seq3489149 Length=195 Score = 91.5 bits (100), Expect = 2e-13 Identities = 134/190 (71%), Gaps = 0/190 (0%) Strand=Plus/Minus Query 24505 AAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAACGCCAATA 24564 |||| ||| ||||||||||| |||||||||||||| | |||||||| || || | Sbjct 190 AAAACCGTGTCGCTAAATTTTCGCCAACTATTCCGTCACTAGTGGCAAAAAAGGCTAAAA 131 Query 24565 CATGTTTTATAAAATATTTTTCGTCTGGTGTTAGTTTATTCCAATCATTGATATCTTTAG 24624 || | | |||||| | || | || || ||||||| ||| ||||| || | Sbjct 130 TGTGCGTGAGGAAATATCTCTCACCCTCGGTGAGAGCGTTCCAATGATTTATATCCTTGG 71 Query 24625 ATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACATATTCCAGA 24684 | | ||| ||||| |||| ||||||||||| ||||| || | || ||||| ||| | Sbjct 70 AAAGATCTACTTCGGCCACCGTCCAAAATGACGCCTCCTCCCTCTTGTACATTCGCCAAA 11 Query 24685 TGTCATGATA 24694 |||| |||| Sbjct 10 TGTCGGGATA 1 >seq3878943 Length=409 Score = 89.7 bits (98), Expect = 6e-13 Identities = 112/154 (73%), Gaps = 0/154 (0%) Strand=Plus/Minus Query 24134 ACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAG 24193 ||| || || |||||||| | ||||||||||| ||| | || ||| |||| | Sbjct 256 ACAGGCAAAGTCGCAGTGCATGCCCTCGTCTCTGGAAATAAGCTCATTGAAAAATAATAC 197 Query 24194 TCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAA 24253 || ||||| || || || || || ||||| | ||| | ||||| ||| |||||||| Sbjct 196 ACCTGGCATAAGACCGCGTTTCTTGAGCCAGACTATCGCCGCAAGGCTTCCGGAAAAGAA 137 Query 24254 AATTCCTTCTACTGCCGCAAAGGCAATAAGTCTT 24287 ||| |||||||| | |||||||||| |||||| Sbjct 136 AATACCTTCTACGGGGGCAAAGGCAACCAGTCTT 103 >seq780845 Length=2927 Score = 86.0 bits (94), Expect = 7e-12 Identities = 115/159 (72%), Gaps = 1/159 (1%) Strand=Plus/Plus Query 54776 AGtttt-tttGTTTCTTTGTGTAGATTTGATACGGCTATTCTAGCGGCTAGAATGGCATA 54834 |||||| |||||||| || || || || ||||| || || | || |||| ||| ||||| Sbjct 2453 AGTTTTCTTTGTTTCCTTATGGAGGTTGGATACTGCAATACGGGCTGCTAAAATTGCATA 2512 Query 54835 ATCCGGATGTTGTGTAGTACAAGTGGCTGCTATTTCGGCTGTCAGAGTGTCCAATTCTAC 54894 ||||||||| | || || || || || | || |||| || ||||||||||| || Sbjct 2513 ATCCGGATGCTTCGTTGTCATGGTAGCAGCAGTCTCAGCTGCAAGTGTGTCCAATTCAAC 2572 Query 54895 CGTTGTTACTCCATTATATATTCCTTGGATAACCTTCAT 54933 || || ||||||| || || || ||| || ||||| Sbjct 2573 TGTGGTAACTCCATGGTAGATCCCGCTGATCACTTTCAT 2611 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 564270915771360