Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ophionereis_20fasciata_20[genbank_20GCA_5F900067615.1_202017-02-27] 3,968,282 sequences; 1,184,528,790 total letters Query= NC_003102.1 Length=139342 Score E Sequences producing significant alignments: (Bits) Value seq456579 167 2e-36 seq805419 111 1e-19 seq817554 105 6e-18 seq3249809 84.2 2e-11 >seq456579 Length=1737 Score = 167 bits (184), Expect = 2e-36 Identities = 403/602 (67%), Gaps = 6/602 (1%) Strand=Plus/Plus Query 57537 AGATTTGTCATGTTTCCGATTGAATATCCAGACATTTGGAACATGTACAAAAAGGCAGAA 57596 ||||| ||||| || ||||| |||| ||| | ||||| |||||||| || || Sbjct 497 AGATTCGTCATTTTCCCGATACAATACGAAGATGTGTGGAAAATGTACAAGCGAGCGGAG 556 Query 57597 GCATCGTTTTGGACCGTCGAAGAAGTAGACCTGTCTAAGGATCTGAGCGATTGGGATTCC 57656 || || |||||||| | || || || || | || ||| | ||||||| Sbjct 557 GCTTCTTTTTGGACGACGGCTGAGGTTGATCTCGCCAAAGATAAACCCCATTGGGAAAGT 616 Query 57657 CTCAAAGAATCTGAGAGAAATTTTATTAAACACGTGTTGGCGTTTTTCGCCGCATCCGAT 57716 ||||| || |||| | |||| || ||| | | || |||||||| | | ||| Sbjct 617 CTCAATGACGGCGAGAAATATTTCATCTCCCACATCCTCGCCTTTTTCGCGGGAAGCGAC 676 Query 57717 GGTATTGTTAACGAGAATTTGGTCGAAA-GATTTTCACAAGAAGTGCAAGTGACGGAGGC 57775 || || ||| ||| ||| ||| ||| | | |||| ||||| || | | || || Sbjct 677 GGGATCGTTGTCGAAAATCTGG-CGACACGGTTTTGTAGGGAAGTCCAGATTCCAGAAGC 735 Query 57776 GAGATGCTTTTACGGATTTCAAGTGGCCATTGAAAACGTGCATTCAGAAATGTATTCGCT 57835 | | | ||||||||| ||||| | || |||||| | || || |||||||| || Sbjct 736 GCGGTTCTTTTACGGGTTTCAGATCATGATGGAAAACATCCACTCGGAAATGTACGGCCT 795 Query 57836 ACTCATCGATACGTACGTGAAGGACA-ACGACGAGAAACGTAGACTGTTCAACGCGATCG 57894 ||||| ||||| ||| | |||| ||| ||| ||||| || |||| ||||| | Sbjct 796 TCTCATAGATACCTACATCCAGGATTCACG-CGAAAAACGATATTTGCTCAAAGCGATTG 854 Query 57895 AAACAATGCCCGCGATCGCCAAGAAGGCAGAGTGGTCAATCAAATGGATAAAAAGCGCCA 57954 |||| || |||||| | ||||| || || ||| | | | |||||| || | Sbjct 855 AAACTATTCCCGCGGTGAAAAAGAAAGCCGACTGGGCCCTGAGATGGATCAAT-GATAGT 913 Query 57955 CG-GCCACGTTCGCCGAGAGGCTAATCGCGTTCGCCGCCGTCGAAGGTATATTCTTTTCG 58013 || ||| | |||||| ||| || |||| |||||| ||||||||| || |||||||| Sbjct 914 CGAGCCTCTTTCGCCACGAGACTCGTCGCTTTCGCCATCGTCGAAGGAATTTTCTTTTCC 973 Query 58014 GGCAGCTTTGCGGCAATATTTTGGATGAAGAAACGCGGCCTGATGCCCGGCCTGACGTTT 58073 || || || || ||||| ||| |||||||| | || ||||||||||| ||||| || Sbjct 974 GGATCGTTCGCCGCGATATTCTGGTTGAAGAAAAGGGGTCTGATGCCCGGTCTGACCTTC 1033 Query 58074 AGCAACGAGTTGATATCGCGCGACGAGGGTCTCCATACTGATTTTGCGTGCCTAATGTAC 58133 |||||| | || |||||||||| | || |||||| || || || ||| | Sbjct 1034 TCCAACGAACTCATCAGCCGCGACGAGGCGTTACACTGTGATTTCGCTTGTTTATTGTTC 1093 Query 58134 TC 58135 || Sbjct 1094 TC 1095 >seq805419 Length=1311 Score = 111 bits (122), Expect = 1e-19 Identities = 239/353 (68%), Gaps = 16/353 (5%) Strand=Plus/Minus Query 57963 TTCGCCGAGAGGCTAATCGCGTTCGCCGCCGTCGAAGGTATATTCTTTTCGGGCAGCTTT 58022 |||||| || || | || || ||||| ||||| || || || |||||||| |||||| Sbjct 1240 TTCGCCACCAGACTGGTGGCCTTTGCCGCTGTCGAGGGCATCTTTTTTTCGGGAAGCTTT 1181 Query 58023 GCGGCAATATTTTGGATGAAGAAACGCGGCCTGATGCCCGGCCTGACGTTTAGCAACGAG 58082 ||||| ||||| ||| | ||||||||||| || |||| || ||| | ||| ||||||| Sbjct 1180 GCGGCGATATTCTGGCTCAAGAAACGCGGTCTCGTGCCGGGTCTGTCCTTTTCCAACGAG 1121 Query 58083 TTGATATCGCGCGACGAGGGTCTCCATACTGATTTTGCGTGCCTAATGT---ACTCTCAC 58139 | || || | ||||| || | || | ||||| || | ||| | ||| Sbjct 1120 CTCATCTCCAGAGACGATGGCATGCACTGCGGCTTTGCCTGTCATGTGTTTGGCAACCAC 1061 Query 58140 ATTGTCAATAA----ACCGACGCG-GGATCGCATCTTGGACATTATCACCGAGGCGGTCG 58194 | || || ||||| | | ||||| ||| |||||||| |||||||| | Sbjct 1060 TTGAAGAACAAACACACCGAAGAGAAGATCGGATC-----AATTATCACGGAGGCGGTGG 1006 Query 58195 CGATCGAAAATGAGTTTGTCACCGAAGCCCTACCGGTGGCCATGCTCGGTATGAACAATG 58254 |||||||||| ||| ||| || | |||| | ||| | || |||||| | Sbjct 1005 AGATCGAAAATATGTT--TCA-GGAGAGCATACCCAAAGGCATCATAGGCATGAACTACC 949 Query 58255 ATTTGATGTCAAAGTACATTGAGTTTGTTGCCGACAGACTTTTGCTCGAACTG 58307 || ||||| |||||| |||||||| |||||| |||| ||| | |||||| Sbjct 948 ATCTGATGGGCTGGTACATAGAGTTTGTCGCCGACCGACTCTTGGTGGAACTG 896 >seq817554 Length=629 Score = 105 bits (116), Expect = 6e-18 Identities = 156/221 (71%), Gaps = 0/221 (0%) Strand=Plus/Minus Query 57507 GATGAACCACTTTTGCAAGAGAATCCCCGTAGATTTGTCATGTTTCCGATTGAATATCCA 57566 |||||||| ||| | | |||||||||||| | |||||| | || || || ||| | | Sbjct 487 GATGAACCCCTTCTACGAGAGAATCCCCGGCGCTTTGTCGTCTTCCCCATCCAATTCCAA 428 Query 57567 GACATTTGGAACATGTACAAAAAGGCAGAAGCATCGTTTTGGACCGTCGAAGAAGTAGAC 57626 || || |||| |||||||| |||||||| ||||| || ||||| || ||||| || || Sbjct 427 GATATCTGGATGATGTACAAGAAGGCAGAGGCATCATTCTGGACGGTGGAAGAGGTTGAT 368 Query 57627 CTGTCTAAGGATCTGAGCGATTGGGATTCCCTCAAAGAATCTGAGAGAAATTTTATTAAA 57686 || || || || ||| | | ||||| || || || ||||| | ||||| | Sbjct 367 CTATCCAAAGACATGAACCACTGGGAGAAGCTGAATGACAACGAGAGGCACTTTATCTCA 308 Query 57687 CACGTGTTGGCGTTTTTCGCCGCATCCGATGGTATTGTTAA 57727 || |||||||| || || || || || ||||| || || Sbjct 307 CATGTGTTGGCCTTCTTTGCTGCTAGTGACGGTATCGTCAA 267 >seq3249809 Length=164 Score = 84.2 bits (92), Expect = 2e-11 Identities = 91/121 (75%), Gaps = 0/121 (0%) Strand=Plus/Plus Query 58267 AGTACATTGAGTTTGTTGCCGACAGACTTTTGCTCGAACTGATTGGAGAGCGTCATTACA 58326 ||||||| || ||||| || |||||||||||| | |||||||| || ||| |||||| Sbjct 13 AGTACATCGAATTTGTCGCAGACAGACTTTTGGTGGAACTGATCGGGGAGAAGCATTACT 72 Query 58327 ACACGAAAAATCCGTTTGATTTTATGAATCTGATCTCGCTCGAGGGCAAGACAAACTTTT 58386 || | ||||| || ||||||||| | ||||| | || ||||||| ||||||| Sbjct 73 ACGTTCAGAATCCTTTCGATTTTATGGAGAATATCTCTTTGGAAGGCAAGAGCAACTTTT 132 Query 58387 T 58387 | Sbjct 133 T 133 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 424210650089606