Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ophionereis_20fasciata_20[genbank_20GCA_5F900067615.1_202017-02-27] 3,968,282 sequences; 1,184,528,790 total letters Query= NC_003225.3 Length=309286 Score E Sequences producing significant alignments: (Bits) Value seq3953357 91.5 3e-13 seq3718751 86.0 1e-11 >seq3953357 Length=757 Score = 91.5 bits (100), Expect = 3e-13 Identities = 107/145 (74%), Gaps = 0/145 (0%) Strand=Plus/Minus Query 101919 TTGCCTTTGCTGCAGTTGAAGGAATCTTCTTTAGTGGTGCATTCGCATCCATTTTCTGGA 101978 |||| ||||| || || ||||| |||||||| ||| | || ||| |||| ||||||| Sbjct 251 TTGCATTTGCCGCCGTGGAAGGGATCTTCTTCTCTGGATCTTTTGCAGCCATCTTCTGGA 192 Query 101979 TCAAGAACAGGGGTATTTTGCCTGGTCTCACCTCCTCCAATGAGTTCATTTCTAGGGACG 102038 |||| || || || || | || || |||||| |||| || | || || ||||||| Sbjct 191 TCAAAAAGAGAGGGATCCTTCCGGGCATCACCTTTGCCAACGAACTGATCTCCAGGGACG 132 Query 102039 AAGGTCTTCATCGCGACTTTGCATG 102063 |||| || || |||||||||| || Sbjct 131 AAGGACTGCACTGCGACTTTGCTTG 107 >seq3718751 Length=264 Score = 86.0 bits (94), Expect = 1e-11 Identities = 88/115 (77%), Gaps = 0/115 (0%) Strand=Plus/Plus Query 101918 GTTGCCTTTGCTGCAGTTGAAGGAATCTTCTTTAGTGGTGCATTCGCATCCATTTTCTGG 101977 |||||||||||||| || || |||||||| ||| ||| | || ||| | || || ||| Sbjct 150 GTTGCCTTTGCTGCTGTAGAGGGAATCTTTTTTTCTGGATCGTTTGCAGCGATCTTTTGG 209 Query 101978 ATCAAGAACAGGGGTATTTTGCCTGGTCTCACCTCCTCCAATGAGTTCATTTCTA 102032 |||||||| || || || ||||||||| |||| | | | || ||| | || |||| Sbjct 210 ATCAAGAAGAGAGGAATCTTGCCTGGTATCACTTTCGCTAACGAGCTTATATCTA 264 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 940500186585120