Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ophionereis_20fasciata_20[genbank_20GCA_5F900067615.1_202017-02-27] 3,968,282 sequences; 1,184,528,790 total letters Query= NC_003310.1 Length=196858 Score E Sequences producing significant alignments: (Bits) Value seq760737 356 3e-93 seq456579 188 9e-43 seq817554 122 1e-22 seq718041 102 1e-16 seq780845 89.7 6e-13 seq3953357 87.8 2e-12 seq3489149 86.0 8e-12 seq431264 86.0 8e-12 >seq760737 Length=2966 Score = 356 bits (394), Expect = 3e-93 Identities = 618/896 (69%), Gaps = 17/896 (2%) Strand=Plus/Minus Query 33277 ACATAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCTT 33336 ||||||| || ||||||||| || || || | |||||| ||||| |||| ||| |||| Sbjct 1554 ACATAACCCCTGATTTTTGGTACTCGCCAACTCTTTTTTCAAAAAAGTTAGATTTCCCTT 1495 Query 33337 CCAATGATATATTTTCCATGAAATCAAACGGATTGGTAACATTGTAAAtttttttAAATC 33396 | | ||| ||||| ||||| || |||||||| || || | | | |||||| | | Sbjct 1494 CAATTGAAATATTATCCATAAAGTCAAACGGGTTTTTAGCGCGAAATAACTTTTTACAAC 1435 Query 33397 CCAATTCAGAAATCAATCTATCTGCGACGAATTCTATATATGTTTTCATCATTTCACAAT 33456 ||||||| || | | ||||| || ||||||||||| |||||| | || || Sbjct 1434 CCAATTCTACAAGAAGACGGTCTGCCACAAATTCTATATACTGTTTCATAAGATCTTTAT 1375 Query 33457 TCATTCCTATGAGTTTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATGGATACCG 33516 ||||||| || | |||| || ||| || ||| |||| ||| |||| || Sbjct 1374 TCATTCCAATCATTTTATTCGGGCATGCCGTTTCAAAAAAATCTTTTTC----GATATCG 1319 Query 33517 CATTTGTTATAATAAATCT----AACGGTTTCTTCACTCGGTGGATGTAATAAA---TGT 33569 | || | | ||| | || | | |||| ||||| ||| ||| | | Sbjct 1318 ACTGCGTCACCAACAATTTTGTAAATGATGGATTCATTCGGTTTTTGTTTTAAGCACTCT 1259 Query 33570 TTAAACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAATTCGTTA 33629 |||||| | || | |||||||| || | || ||||||||| |||||||||||| Sbjct 1258 CTAAACACAAGGCAAGAAAAATCGCAATGTAAGCCTTCGTCTCTAGAAATTAATTCGTTT 1199 Query 33630 GAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGAT 33689 ||||| |||||||| || | | || | |||||| ||||||||||| | |||||||||| Sbjct 1198 GAAAAAGTGAGTCCTGGAAGCAACCCTCTCTTTTTCAGCCAAAATATCGCAGCGAATGAT 1139 Query 33690 CCGGAAAAGAAGATTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCCATAACCGGCG 33749 || |||| || || |||||||| ||||| || || | |||||| || | | | Sbjct 1138 CCACAAAAAAAAATGCCTTCTACACATGCAAAAGCGATTAACCTCTCTGCAAAT---GAG 1082 Query 33750 CTGTCATGT---ATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTT 33806 | ||| | ||||| | ||||||||| ||||||||||| || ||||| | |||| Sbjct 1081 TTATCAGATGCAATCCAAGCTAAAGCCCAATCAGCCTTCTTTTTAACGCAAGGTAACGTT 1022 Query 33807 TCTATGGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAA 33866 || || || ||||| ||| | ||||||||| ||||| | |||||| || || || Sbjct 1021 TCGATCGCGTTAAAAAGACACATTTTTTCATCTTCGTCTTTGATATAAGTTTCAATTAAC 962 Query 33867 AGACTATACATTTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTA 33926 | ||||||||||||| |||||| ||||| || || |||||||| || || || ||| | Sbjct 961 AAGCTATACATTTCCGTATGAATATTTTCCATCGCAATCTGAAAGCCATAAAAGCATTTT 902 Query 33927 GCCTCGGTAATCTGCACTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCA 33986 || | ||| || ||||| | ||||||| | ||| |||||| || || | | Sbjct 901 ATTTCTGCAATTTGAACTTCGGCTAAAAATCGCTGGACTATATTTTCTAATACAATGCAA 842 Query 33987 TCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCTGGTGTTAGT 34046 ||| |||||| || || |||| | || || || ||||| |||| |||| | Sbjct 841 TCAGCATTTGCAAAGAAAGCTAATATGTACTTGATGAATGTCTTTTCATCTGTAGTTAAT 782 Query 34047 TTATTCCAATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCC 34106 | | ||| || | | ||| || | || ||| ||||| | |||||||||||||| ||| Sbjct 781 TGGTACCAGTCTTGTAAATCCTTTGTTAAATCAACTTCATTAACTGTCCAAAATGAAGCC 722 Query 34107 TCTGCCTTTTTATACATATTCCAGATGTCATGATATTGGATTGGGAAAATAACAAA 34162 | ||| ||||||||||| |||| | | || |||||| ||||| || | |||||| Sbjct 721 TGTGCTTTTTTATACATTGTCCAAAATTTATCATATTGTATTGGAAATAGAACAAA 666 >seq456579 Length=1737 Score = 188 bits (208), Expect = 9e-43 Identities = 402/598 (67%), Gaps = 7/598 (1%) Strand=Plus/Minus Query 33573 AACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAATTCGTTAGAA 33632 |||| ||||| |||||||| ||||| | ||||||| | || || | |||||| || Sbjct 1092 AACAATAAACAAGCGAAATCACAGTGTAACGCCTCGTCGCGGCTGATGAGTTCGTTGGAG 1033 Query 33633 AACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCG 33692 || || || |||||||| || || | || || | ||| ||||| | ||||| |||||| Sbjct 1032 AAGGTCAGACCGGGCATCAGACCCCTTTTCTTCAACCAGAATATCGCGGCGAACGATCCG 973 Query 33693 GAAAAGAAGATTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCCATAACCGGC---G 33749 |||||||| |||||||| || || || || | |||||| | || ||| Sbjct 972 GAAAAGAAAATTCCTTCGACGATGGCGAAAGCGACGAGTCTCGTGGCGAAAGAGGCTCGA 913 Query 33750 CTGTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCT 33809 || |||| ||||| | | ||||| ||||| |||||||| || || || ||||| Sbjct 912 CTATCATTGATCCATCTCAGGGCCCAGTCGGCTTTCTTTTTCACCGCGGGAATAGTTTCA 853 Query 33810 ATGGCATTAA--AGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAA 33867 || || || | | | || |||||| | | | ||| | | || ||||| || | || Sbjct 852 ATCGCTTTGAGCAAATATCGTTTTTCGCGTGA--ATCCTGGATGTAGGTATCTATGAGAA 795 Query 33868 GACTATACATTTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAG 33927 | | ||||||||||| || |||||||| || |||||||| ||||| || | | | Sbjct 794 GGCCGTACATTTCCGAGTGGATGTTTTCCATCATGATCTGAAACCCGTAAAAGAACCGCG 735 Query 33928 CCTCGGTAATCTGCACTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCAT 33987 | || | |||||| ||||| ||||||| ||| || | |||||| || || || | Sbjct 734 CTTCTGGAATCTGGACTTCCCTACAAAACCGTGTCGCCAGATTTTCGACAACGATCCCGT 675 Query 33988 CACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCTGGTGTTAGTT 34047 | || | || ||||| || | | || || |||||||| ||| | | || Sbjct 674 CGCTTCCCGCGAAAAAGGCGAGGATGTGGGAGATGAAATATTTCTCGCCGTCATTGAGAC 615 Query 34048 TATTCCAATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCT 34107 | | ||||| ||||||| | | ||| || || || |||||||| || |||| Sbjct 614 TTTCCCAATGGGGTTTATCTTTGGCGAGATCAACCTCAGCCGTCGTCCAAAAAGAAGCCT 555 Query 34108 CTGCCTTTTTATACATATTCCAGATGTCATGATATTGGATTGGGAAAATAACAAATCT 34165 | || || ||||| ||||| | || | ||||| || |||||||| || ||||| Sbjct 554 CCGCTCGCTTGTACATTTTCCACACATCTTCGTATTGTATCGGGAAAATGACGAATCT 497 Score = 82.4 bits (90), Expect = 9e-11 Identities = 81/104 (78%), Gaps = 3/104 (3%) Strand=Plus/Minus Query 33267 TCTTCTTGAGAC---ATAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAA 33323 |||||| | ||| ||||| ||| | ||||||||||| || || | ||||||||| ||| Sbjct 1464 TCTTCTGGCGACGTCATAACGCCCGTCTTTTGGTATTCCCCTACTCTTTTTTCGAAGAAA 1405 Query 33324 TTAGTTTTTCCTTCCAATGATATATTTTCCATGAAATCAAACGG 33367 || | || ||||| | |||||||| ||||| |||||||| || Sbjct 1404 TTGCTCTTCCCTTCTAGGGATATATTCTCCATAAAATCAAAAGG 1361 >seq817554 Length=629 Score = 122 bits (134), Expect = 1e-22 Identities = 143/191 (75%), Gaps = 2/191 (1%) Strand=Plus/Plus Query 33973 CATTCACTATTCCATCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTT 34032 |||| || || || ||||| || ||||| || ||||| |||||| ||||| | | | Sbjct 265 CATTGACGATACCGTCACTAGCAGCAAAGAAGGCCAACACATGTGAGATAAAGTGCCTCT 324 Query 34033 CGTCTGGTGTT-AGTTTATTCCAATCATTGATATCTTTAGATATATCCACTTCTTCCACT 34091 ||| || || || || | ||| | || || ||||| |||| ||| || |||||||| Sbjct 325 CGT-TGTCATTCAGCTTCTCCCAGTGGTTCATGTCTTTGGATAGATCAACCTCTTCCACC 383 Query 34092 GTCCAAAATGATGCCTCTGCCTTTTTATACATATTCCAGATGTCATGATATTGGATTGGG 34151 ||||| ||||||||||||||||| || ||||| ||||||| || || ||||||| ||| Sbjct 384 GTCCAGAATGATGCCTCTGCCTTCTTGTACATCATCCAGATATCTTGGAATTGGATGGGG 443 Query 34152 AAAATAACAAA 34162 || | ||||| Sbjct 444 AAGACGACAAA 454 >seq718041 Length=1499 Score = 102 bits (112), Expect = 1e-16 Identities = 152/212 (72%), Gaps = 8/212 (4%) Strand=Plus/Plus Query 63437 GTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTTGATATACCATT 63496 |||||| |||||||| || || || ||||||||||| || | || |||||| ||||||| Sbjct 391 GTATCTTGCGGTGTTGTTGTATACCCTCAACATTGGTATTAAGCCATTTGATGTACCATT 450 Query 63497 GGTACCGGAGATATAGCCTCCACTGGCACGAAT--ATTACTAATTGATAGACCTATTCCC 63554 ||| || | ||||||| |||| || | ||| | | |||| || |||| ||| Sbjct 451 GGTGCCAGCAATATAGCTTCCAGATGCTCTAATGCAGTGAACATTG--AGGCCTACACCC 508 Query 63555 CCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTGTCATAGATGCCTTCTATGCTA 63614 ||||| | || ||||| | ||||| | || | ||||| ||||| |||||||| || Sbjct 509 CCTGCTGTCTTTGAGATGAGGGCGCACTGCTTCAGTGTGTCGTAGATTCCTTCTATACTG 568 Query 63615 TCATCGAT--CATGTTAAGTAGAAAACAGCTA 63644 || ||| |||| | || || ||||| ||| Sbjct 569 TC--TGATGCCATGGTGAGCAGGAAACAACTA 598 Score = 82.4 bits (90), Expect = 9e-11 Identities = 104/143 (73%), Gaps = 0/143 (0%) Strand=Plus/Plus Query 63662 AGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATT 63721 ||| || |||||||| || || || || || || |||||||| || ||||| || | || Sbjct 1332 AGTGCCTGCATTAAACAATGTGGGTGAGGCATGTGTAAACCACTTCTCAGAGAGCAAGTT 1391 Query 63722 GTACGTCTCAATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATTAA 63781 || ||||||||||| || || || || ||| || || ||||| || | ||| | Sbjct 1392 ATAGGTCTCAATAGCACCTTCAATGTCATTTTCATGGATGCCAACTGCTACCCTCATCAG 1451 Query 63782 CATGTGCTGAGGTCTTTCAACAA 63804 |||||| || |||| |||| ||| Sbjct 1452 CATGTGTTGGGGTCGTTCAGCAA 1474 >seq780845 Length=2927 Score = 89.7 bits (98), Expect = 6e-13 Identities = 101/134 (75%), Gaps = 1/134 (1%) Strand=Plus/Plus Query 64014 AGtttt-tttGTTTCCTTGTGTAGATTTGATATGGCTATTCTGGCGGCTAGAATGGCATA 64072 |||||| ||||||||||| || || || |||| || || | ||| |||| ||| ||||| Sbjct 2453 AGTTTTCTTTGTTTCCTTATGGAGGTTGGATACTGCAATACGGGCTGCTAAAATTGCATA 2512 Query 64073 ATCCGGATGTTGTGTAGTACAAGTGGCTGCTATTTCGGCTGCCAGAGTGTCCAATTCTAC 64132 ||||||||| | || || || || || | || ||||| || ||||||||||| || Sbjct 2513 ATCCGGATGCTTCGTTGTCATGGTAGCAGCAGTCTCAGCTGCAAGTGTGTCCAATTCAAC 2572 Query 64133 CGTTGTTACTCCAT 64146 || || ||||||| Sbjct 2573 TGTGGTAACTCCAT 2586 >seq3953357 Length=757 Score = 87.8 bits (96), Expect = 2e-12 Identities = 111/153 (73%), Gaps = 0/153 (0%) Strand=Plus/Plus Query 33581 ACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAATTCGTTAGAAAACGTGAG 33640 ||| || || ||||||||||| || ||||| || || | |||||| | ||| |||| Sbjct 106 ACAAGCAAAGTCGCAGTGCAGTCCTTCGTCCCTGGAGATCAGTTCGTTGGCAAAGGTGAT 165 Query 33641 TCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCGGAAAAGAA 33700 || || | | || | |||||| | ||| || |||| || || ||||| || ||||| Sbjct 166 GCCCGGAAGGATCCCTCTCTTTTTGATCCAGAAGATGGCTGCAAAAGATCCAGAGAAGAA 225 Query 33701 GATTCCTTCTACTGCAGCAAAGGCAATAAGTCT 33733 ||| ||||| || || ||||| ||||| |||| Sbjct 226 GATCCCTTCCACGGCGGCAAATGCAATCTGTCT 258 >seq3489149 Length=195 Score = 86.0 bits (94), Expect = 8e-12 Identities = 133/190 (70%), Gaps = 0/190 (0%) Strand=Plus/Minus Query 33952 AAAATCGTTCTGCTAAATTTTCATTCACTATTCCATCACTGGCTGCAAAAAACGCCAATA 34011 |||| ||| ||||||||||| |||||||| ||||| | |||||||| || || | Sbjct 190 AAAACCGTGTCGCTAAATTTTCGCCAACTATTCCGTCACTAGTGGCAAAAAAGGCTAAAA 131 Query 34012 CATGTTTTATAAAATATTTTTCGTCTGGTGTTAGTTTATTCCAATCATTGATATCTTTAG 34071 || | | |||||| | || | || || ||||||| ||| ||||| || | Sbjct 130 TGTGCGTGAGGAAATATCTCTCACCCTCGGTGAGAGCGTTCCAATGATTTATATCCTTGG 71 Query 34072 ATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACATATTCCAGA 34131 | | ||| ||||| |||| ||||||||||| ||||| || | || ||||| ||| | Sbjct 70 AAAGATCTACTTCGGCCACCGTCCAAAATGACGCCTCCTCCCTCTTGTACATTCGCCAAA 11 Query 34132 TGTCATGATA 34141 |||| |||| Sbjct 10 TGTCGGGATA 1 >seq431264 Length=3073 Score = 86.0 bits (94), Expect = 8e-12 Identities = 132/186 (71%), Gaps = 2/186 (1%) Strand=Plus/Plus Query 62619 GATCCTACATATGTATCATATGGTCCTTCCTTCTCAGCTAGTTTACA-ACTCGCCTCTAA 62677 |||||| |||||| ||||||||||| | | | ||||| ||| || || |||| | Sbjct 1250 GATCCTTCATATGATTCATATGGTCCCTTTTCTTTAGCTA-TTTCCATGCTAGCCTGCAG 1308 Query 62678 TGCACCGTAATAAATGGTTTCAAAGATCTTCTTATTTAGATCTTGTGCTTCCGGGCTATC 62737 || || || || |||||||||||||||| | || || | |||||||| ||| || Sbjct 1309 AGCTCCATAGTAGATGGTTTCAAAGATCTGGATGTTGAGCTTCTGTGCTTCTTCGCTCTC 1368 Query 62738 AAATGGATAATTTAAGAGAATAAACGCGTCCGCTAATCCTTGAACACCAATACCGATAGG 62797 ||| ||| | | | || || ||||| |||| ||||| |||||||| || ||||| Sbjct 1369 AAAGGGAAAGCGCATCATGATGAATGCGTCTGCTAGACCTTGCACACCAATGCCAATAGG 1428 Query 62798 TCTATG 62803 | ||| Sbjct 1429 GCGATG 1434 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 598576426932960