Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ophionereis_20fasciata_20[genbank_20GCA_5F900067615.1_202017-02-27] 3,968,282 sequences; 1,184,528,790 total letters Query= NC_003391.1 Length=205719 Score E Sequences producing significant alignments: (Bits) Value seq760737 347 2e-90 seq456579 183 4e-41 seq817554 118 1e-21 seq718041 111 2e-19 seq3830724 100 4e-16 seq3489149 89.7 6e-13 seq780845 89.7 6e-13 seq3878943 87.8 2e-12 >seq760737 Length=2966 Score = 347 bits (384), Expect = 2e-90 Identities = 615/891 (69%), Gaps = 7/891 (1%) Strand=Plus/Minus Query 35853 ACATAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTACCTT 35912 ||||||| || ||||||||| || || || | |||||| ||||| |||| ||| |||| Sbjct 1554 ACATAACCCCTGATTTTTGGTACTCGCCAACTCTTTTTTCAAAAAAGTTAGATTTCCCTT 1495 Query 35913 CTAATGATATATTTTCCATGAAATCGAATGGATTGATAACATTATAAAtttttttAAATC 35972 | | ||| ||||| ||||| || || || || || || | | | | |||||| | | Sbjct 1494 CAATTGAAATATTATCCATAAAGTCAAACGGGTTTTTAGCGCGAAATAACTTTTTACAAC 1435 Query 35973 CCAATTCAGAAATCAATCTATCTGCGACAAATTCTATATATGTTTTCATCATTTCACAAT 36032 ||||||| || | | ||||| |||||||||||||| |||||| | || || Sbjct 1434 CCAATTCTACAAGAAGACGGTCTGCCACAAATTCTATATACTGTTTCATAAGATCTTTAT 1375 Query 36033 TCATTCCTATAAGTTTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATAGAGACCG 36092 ||||||| || | |||| || ||| || ||| |||| ||| ||| ||| | Sbjct 1374 TCATTCCAATCATTTTATTCGGGCATGCCGTTTCAAAAAAATCTTTTTCGATATCGACTG 1315 Query 36093 CGTCTGTTATAATAGATATTACTGTTTC-TTCACTCGGTG---GATACAATAAATGTTTA 36148 |||| | ||| | | | || | |||| ||||| | | || | | | || Sbjct 1314 CGTCACCAACAATTT-TGTAAATGATGGATTCATTCGGTTTTTGTTTTAAGCACTCTCTA 1256 Query 36149 AACATCAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAA 36208 |||| | || | |||||||| |||| || ||||||||| |||||||||||| ||| Sbjct 1255 AACACAAGGCAAGAAAAATCGCAATGTAAGCCTTCGTCTCTAGAAATTAATTCGTTTGAA 1196 Query 36209 AACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCA 36268 || |||||||| || | | || | |||||| ||||||||||| | || ||||||||| Sbjct 1195 AAAGTGAGTCCTGGAAGCAACCCTCTCTTTTTCAGCCAAAATATCGCAGCGAATGATCCA 1136 Query 36269 GAAAAGAAAATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCGGCACTG 36328 |||| ||||| |||||||| ||||| || || | |||||| || || | | Sbjct 1135 CAAAAAAAAATGCCTTCTACACATGCAAAAGCGATTAACCTCTCTGCA-AATGAGTTATC 1077 Query 36329 TCATG-TATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTAT 36387 ||| ||||| | ||||||||| ||||||||||| || ||||| | || || || Sbjct 1076 AGATGCAATCCAAGCTAAAGCCCAATCAGCCTTCTTTTTAACGCAAGGTAACGTTTCGAT 1017 Query 36388 AGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCAATCAAAAGACT 36447 || ||||| ||| | ||||||||| ||||| | ||| || ||||| || | || Sbjct 1016 CGCGTTAAAAAGACACATTTTTTCATCTTCGTCTTTGATATAAGTTTCAATTAACAAGCT 957 Query 36448 ATACATTTCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAACATCTAGCCTC 36507 ||||||||||| |||||| ||||| || || || ||||| || || || ||| | || Sbjct 956 ATACATTTCCGTATGAATATTTTCCATCGCAATCTGAAAGCCATAAAAGCATTTTATTTC 897 Query 36508 GGTAATCTGTACTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCACT 36567 | ||| || ||||| | ||||||| | ||| |||||| || || | ||| Sbjct 896 TGCAATTTGAACTTCGGCTAAAAATCGCTGGACTATATTTTCTAATACAATGCAATCAGC 837 Query 36568 GGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTTTGGTGTTAGTTTATT 36627 |||||| || || |||| | || || || ||||| | || |||| || | Sbjct 836 ATTTGCAAAGAAAGCTAATATGTACTTGATGAATGTCTTTTCATCTGTAGTTAATTGGTA 777 Query 36628 CCAATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGC 36687 ||| || | | ||| || | || ||| ||||| | |||||||||||||| |||| ||| Sbjct 776 CCAGTCTTGTAAATCCTTTGTTAAATCAACTTCATTAACTGTCCAAAATGAAGCCTGTGC 717 Query 36688 CTTTTTATACATATTCCAGATGTCATGATATTGAATTGGAAAAATAACAAA 36738 ||||||||||| |||| | | || |||||| |||||||| | |||||| Sbjct 716 TTTTTTATACATTGTCCAAAATTTATCATATTGTATTGGAAATAGAACAAA 666 >seq456579 Length=1737 Score = 183 bits (202), Expect = 4e-41 Identities = 401/598 (67%), Gaps = 7/598 (1%) Strand=Plus/Minus Query 36149 AACATCAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAA 36208 |||| ||||| |||||||| ||||||| ||||||| | || || | ||||||||| Sbjct 1092 AACAATAAACAAGCGAAATCACAGTGTAACGCCTCGTCGCGGCTGATGAGTTCGTTGGAG 1033 Query 36209 AACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCA 36268 || || || |||||||| || || | || || | ||| ||||| | || || ||||| Sbjct 1032 AAGGTCAGACCGGGCATCAGACCCCTTTTCTTCAACCAGAATATCGCGGCGAACGATCCG 973 Query 36269 GAAAAGAAAATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCGGC---A 36325 ||||||||||||||||| || || || || | |||||| | || ||| | Sbjct 972 GAAAAGAAAATTCCTTCGACGATGGCGAAAGCGACGAGTCTCGTGGCGAAAGAGGCTCGA 913 Query 36326 CTGTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCT 36385 || |||| ||||| | | ||||| ||||| |||||||| || || || || || Sbjct 912 CTATCATTGATCCATCTCAGGGCCCAGTCGGCTTTCTTTTTCACCGCGGGAATAGTTTCA 853 Query 36386 ATAGCATTAA--AGAGATAGtttttttCATTACTATCTTTAACATATGTATCAATCAAAA 36443 || || || | | | || |||||| | | | ||| | | || ||||| || | || Sbjct 852 ATCGCTTTGAGCAAATATCGTTTTTCGCGTGA--ATCCTGGATGTAGGTATCTATGAGAA 795 Query 36444 GACTATACATTTCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAACATCTAG 36503 | | ||||||||||| || |||||||| || || ||||| ||||| || | | | Sbjct 794 GGCCGTACATTTCCGAGTGGATGTTTTCCATCATGATCTGAAACCCGTAAAAGAACCGCG 735 Query 36504 CCTCGGTAATCTGTACTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGT 36563 | || | |||||| ||||| ||||||| ||| || | |||||| || || |||| Sbjct 734 CTTCTGGAATCTGGACTTCCCTACAAAACCGTGTCGCCAGATTTTCGACAACGATCCCGT 675 Query 36564 CACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTTTGGTGTTAGTT 36623 | || | || ||||| || | | || || |||||||| ||| | || Sbjct 674 CGCTTCCCGCGAAAAAGGCGAGGATGTGGGAGATGAAATATTTCTCGCCGTCATTGAGAC 615 Query 36624 TATTCCAATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCT 36683 | | ||||| ||||||| | | ||| || || || |||||||| || |||| Sbjct 614 TTTCCCAATGGGGTTTATCTTTGGCGAGATCAACCTCAGCCGTCGTCCAAAAAGAAGCCT 555 Query 36684 CTGCCTTTTTATACATATTCCAGATGTCATGATATTGAATTGGAAAAATAACAAATCT 36741 | || || ||||| ||||| | || | ||||| || || ||||| || ||||| Sbjct 554 CCGCTCGCTTGTACATTTTCCACACATCTTCGTATTGTATCGGGAAAATGACGAATCT 497 Score = 82.4 bits (90), Expect = 1e-10 Identities = 81/104 (78%), Gaps = 3/104 (3%) Strand=Plus/Minus Query 35843 TCTTCTTGAGAC---ATAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAA 35899 |||||| | ||| ||||| ||| | ||||||||||| || || | ||||||||| ||| Sbjct 1464 TCTTCTGGCGACGTCATAACGCCCGTCTTTTGGTATTCCCCTACTCTTTTTTCGAAGAAA 1405 Query 35900 TTAGTTTTACCTTCTAATGATATATTTTCCATGAAATCGAATGG 35943 || | || ||||||| |||||||| ||||| ||||| || || Sbjct 1404 TTGCTCTTCCCTTCTAGGGATATATTCTCCATAAAATCAAAAGG 1361 >seq817554 Length=629 Score = 118 bits (130), Expect = 1e-21 Identities = 140/190 (74%), Gaps = 0/190 (0%) Strand=Plus/Plus Query 36549 CATTCACTATTCCGTCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTT 36608 |||| || || |||||||| || ||||| || ||||| |||||| ||||| | | | Sbjct 265 CATTGACGATACCGTCACTAGCAGCAAAGAAGGCCAACACATGTGAGATAAAGTGCCTCT 324 Query 36609 CGTTTGGTGTTAGTTTATTCCAATCATTGATATCTTTAGATATATCCACTTCTTCCACTG 36668 |||| | || || | ||| | || || ||||| |||| ||| || |||||||| | Sbjct 325 CGTTGTCATTCAGCTTCTCCCAGTGGTTCATGTCTTTGGATAGATCAACCTCTTCCACCG 384 Query 36669 TCCAAAATGATGCCTCTGCCTTTTTATACATATTCCAGATGTCATGATATTGAATTGGAA 36728 |||| ||||||||||||||||| || ||||| ||||||| || || |||| || || | Sbjct 385 TCCAGAATGATGCCTCTGCCTTCTTGTACATCATCCAGATATCTTGGAATTGGATGGGGA 444 Query 36729 AAATAACAAA 36738 | | ||||| Sbjct 445 AGACGACAAA 454 >seq718041 Length=1499 Score = 111 bits (122), Expect = 2e-19 Identities = 154/212 (73%), Gaps = 8/212 (4%) Strand=Plus/Plus Query 66230 GTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGTACCATT 66289 |||||| |||||||| || || || ||||||||||| || | ||||| ||||||||||| Sbjct 391 GTATCTTGCGGTGTTGTTGTATACCCTCAACATTGGTATTAAGCCATTTGATGTACCATT 450 Query 66290 GGTCCCGGAGATATAGCTTCCACTTGCACGAAT--ATTACTAATTGATAGACCTATTCCC 66347 ||| || | |||||||||||| ||| | ||| | | |||| || |||| ||| Sbjct 451 GGTGCCAGCAATATAGCTTCCAGATGCTCTAATGCAGTGAACATTG--AGGCCTACACCC 508 Query 66348 CCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTA 66407 ||||| | || ||||| | ||||| | || | || || ||||| || |||||||| Sbjct 509 CCTGCTGTCTTTGAGATGAGGGCGCACTGCTTCAGTGTGTCGTAGATTCCTTCTATACTG 568 Query 66408 TC--ATCCATCATGTTAAGTAGAAAACAGCTA 66437 || || | |||| | || || ||||| ||| Sbjct 569 TCTGATGC--CATGGTGAGCAGGAAACAACTA 598 >seq3830724 Length=343 Score = 100 bits (110), Expect = 4e-16 Identities = 106/140 (76%), Gaps = 0/140 (0%) Strand=Plus/Plus Query 36149 AACATCAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAA 36208 |||| |||||| || ||||| ||||| | || ||||| | ||| || | |||||||||| Sbjct 200 AACAGCAAACAGGCAAAATCACAGTGCAACCCTTCGTCGCGACTGATGAGTTCGTTGGAA 259 Query 36209 AACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCA 36268 ||||| | ||| ||||| | || || ||||| | ||| ||||||| || || || || Sbjct 260 AACGTCAATCCCGGCATCAATCCTCGTTTTTTCATCCACAATATGGCGGCGAAAGAACCC 319 Query 36269 GAAAAGAAAATTCCTTCTAC 36288 ||||| || | |||||||| Sbjct 320 GAAAAAAATACACCTTCTAC 339 >seq3489149 Length=195 Score = 89.7 bits (98), Expect = 6e-13 Identities = 136/192 (71%), Gaps = 4/192 (2%) Strand=Plus/Minus Query 36528 AAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAACGCCAATA 36587 |||| ||| ||||||||||| |||||||||||||| | |||||||| || || | Sbjct 190 AAAACCGTGTCGCTAAATTTTCGCCAACTATTCCGTCACTAGTGGCAAAAAAGGCTAAAA 131 Query 36588 CATGTTTTATAAAATATTTTTCGT--TTGGTGTTAGTTTATTCCAATCATTGATATCTTT 36645 || | | |||||| | || | |||| || | |||||| ||| ||||| || Sbjct 130 TGTGCGTGAGGAAATATCTCTCACCCTCGGTGAGAGCGT--TCCAATGATTTATATCCTT 73 Query 36646 AGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACATATTCCA 36705 || | ||| ||||| |||| ||||||||||| ||||| || | || ||||| ||| Sbjct 72 GGAAAGATCTACTTCGGCCACCGTCCAAAATGACGCCTCCTCCCTCTTGTACATTCGCCA 13 Query 36706 GATGTCATGATA 36717 ||||| |||| Sbjct 12 AATGTCGGGATA 1 >seq780845 Length=2927 Score = 89.7 bits (98), Expect = 6e-13 Identities = 116/159 (73%), Gaps = 1/159 (1%) Strand=Plus/Plus Query 66807 AGtttt-tttGTTTCTTTGTGTAGATTTGATACGGCTATTCTAGCGGCTATAATGGCATA 66865 |||||| |||||||| || || || || ||||| || || | || |||| ||| ||||| Sbjct 2453 AGTTTTCTTTGTTTCCTTATGGAGGTTGGATACTGCAATACGGGCTGCTAAAATTGCATA 2512 Query 66866 ATCCGGATGTTGTGTAGTACAAGTGGCTGCTATTTCGGCTGCCAGAGTGTCCAATTCTAC 66925 ||||||||| | || || || || || | || ||||| || ||||||||||| || Sbjct 2513 ATCCGGATGCTTCGTTGTCATGGTAGCAGCAGTCTCAGCTGCAAGTGTGTCCAATTCAAC 2572 Query 66926 CGTTGTTACTCCATTATATATTCCTTGGATAACCTTCAT 66964 || || ||||||| || || || ||| || ||||| Sbjct 2573 TGTGGTAACTCCATGGTAGATCCCGCTGATCACTTTCAT 2611 >seq3878943 Length=409 Score = 87.8 bits (96), Expect = 2e-12 Identities = 111/153 (73%), Gaps = 0/153 (0%) Strand=Plus/Minus Query 36157 ACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAG 36216 ||| || || |||||||| | ||||||||||| ||| | || ||| |||| | Sbjct 256 ACAGGCAAAGTCGCAGTGCATGCCCTCGTCTCTGGAAATAAGCTCATTGAAAAATAATAC 197 Query 36217 TCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAA 36276 || ||||| || || || || || ||||| | ||| | ||||| ||| |||||||| Sbjct 196 ACCTGGCATAAGACCGCGTTTCTTGAGCCAGACTATCGCCGCAAGGCTTCCGGAAAAGAA 137 Query 36277 AATTCCTTCTACTGCCGCAAAGGCAATAAGTCT 36309 ||| |||||||| | |||||||||| ||||| Sbjct 136 AATACCTTCTACGGGGGCAAAGGCAACCAGTCT 104 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 625525109060880