Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ophionereis_20fasciata_20[genbank_20GCA_5F900067615.1_202017-02-27] 3,968,282 sequences; 1,184,528,790 total letters Query= NC_003494.1 Length=111362 Score E Sequences producing significant alignments: (Bits) Value seq3830724 104 2e-17 seq805419 102 6e-17 >seq3830724 Length=343 Score = 104 bits (114), Expect = 2e-17 Identities = 123/167 (74%), Gaps = 0/167 (0%) Strand=Plus/Minus Query 22761 TGTTGAAGGCGTCATGTTTTCTGGGTCATTTGCGGCCATATTCTGGCTGAAGAAACGTTC 22820 ||| ||||| || | ||||| || || || || |||||||| ||| |||| ||||| Sbjct 340 TGTAGAAGGTGTATTTTTTTCGGGTTCTTTCGCCGCCATATTGTGGATGAAAAAACGAGG 281 Query 22821 GCTCATGCCAGGGTTGGCGTTTTCCAACGAGTTGATTAGCCGTGACGAAGGTCTACACTG 22880 | ||||| || ||| ||||||||||||| | || || || |||||||| | ||||| Sbjct 280 ATTGATGCCGGGATTGACGTTTTCCAACGAACTCATCAGTCGCGACGAAGGGTTGCACTG 221 Query 22881 TGACTTTGCTTGTATGCTGTTTAGGCAAATGGCAAACAAACCGTGTC 22927 ||| ||||| ||| ||||||| | | | | | ||||||||| || Sbjct 220 TGATTTTGCCTGTTTGCTGTTCACCTATCTTGTACACAAACCGTTTC 174 >seq805419 Length=1311 Score = 102 bits (112), Expect = 6e-17 Identities = 122/162 (75%), Gaps = 3/162 (2%) Strand=Plus/Minus Query 22748 TGGCCTTTGCGGCTGTTGAAGGCGTCATGTTTTCTGGGTCATTTGCGGCCATATTCTGGC 22807 |||||||||| ||||| || ||| || | ||||| || |||||||| |||||||||| Sbjct 1224 TGGCCTTTGCCGCTGTCGAGGGCATCTTTTTTTCGGGAAGCTTTGCGGCGATATTCTGGC 1165 Query 22808 TGAAGAAACGTTCGCTCATGCCAGGGTTGGCGTTTTCCAACGAGTTGATTAGCCGTGACG 22867 | |||||||| ||| |||| || || | |||||||||||| | || | | |||| Sbjct 1164 TCAAGAAACGCGGTCTCGTGCCGGGTCTGTCCTTTTCCAACGAGCTCATCTCCAGAGACG 1105 Query 22868 AAGGTCTACACTGTGACTTTGCTTGT-ATGCTGTTTAGGCAA 22908 | || | ||||| | |||||| ||| ||| ||||| ||||| Sbjct 1104 ATGGCATGCACTGCGGCTTTGCCTGTCATG-TGTTT-GGCAA 1065 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 339004918773646