Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ophionereis_20fasciata_20[genbank_20GCA_5F900067615.1_202017-02-27] 3,968,282 sequences; 1,184,528,790 total letters Query= NC_003663.2 Length=224499 Score E Sequences producing significant alignments: (Bits) Value seq760737 331 1e-85 seq456579 192 8e-44 seq817554 136 5e-27 seq3830724 109 7e-19 seq3953357 102 1e-16 seq780845 98.7 1e-15 seq718041 98.7 1e-15 seq3878943 96.9 5e-15 seq805419 96.9 5e-15 seq3489149 89.7 7e-13 >seq760737 Length=2966 Score = 331 bits (366), Expect = 1e-85 Identities = 612/893 (69%), Gaps = 11/893 (1%) Strand=Plus/Minus Query 49655 ACATAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCTT 49714 ||||||| || ||||||||| || || || | |||||| ||||| |||| ||| |||| Sbjct 1554 ACATAACCCCTGATTTTTGGTACTCGCCAACTCTTTTTTCAAAAAAGTTAGATTTCCCTT 1495 Query 49715 CCAATGATATATTTTCCATGAAATCAAACGGATTGGTAACATTATAAAtttttttAAATC 49774 | | ||| ||||| ||||| || |||||||| || || | | | | |||||| | | Sbjct 1494 CAATTGAAATATTATCCATAAAGTCAAACGGGTTTTTAGCGCGAAATAACTTTTTACAAC 1435 Query 49775 CCAATTCAGAAATCAATCTATCCGCGACAAATTCTATATATGTTTTCATCATTTCACAAT 49834 ||||||| || | | || || |||||||||||||| |||||| | || || Sbjct 1434 CCAATTCTACAAGAAGACGGTCTGCCACAAATTCTATATACTGTTTCATAAGATCTTTAT 1375 Query 49835 TCATTCCTATAAGTTTAACTGGAAGAGCCGCAGTAAGAAATTCTTGTTCAATGGATACCG 49894 ||||||| || | |||| || |||| || ||| |||| ||| || || | Sbjct 1374 TCATTCCAATCATTTTATTCGGGCATGCCGTTTCAAAAAAATCTTTTTCGATATCGACTG 1315 Query 49895 CATCTGTTATAATAGATCTAACGGTTTCTTCACTCGGTGGATGCAATAAA---TGTTTAA 49951 | || | ||| || | | |||| ||||| || ||| | | ||| Sbjct 1314 CGTCACCAACAATTTTGTAAATGATGGATTCATTCGGTTTTTGTTTTAAGCACTCTCTAA 1255 Query 49952 ACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAA 50011 ||| | || | |||||||| || | || ||||||||| ||||| |||||| |||| Sbjct 1254 ACACAAGGCAAGAAAAATCGCAATGTAAGCCTTCGTCTCTAGAAATTAATTCGTTTGAAA 1195 Query 50012 ACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGACCCAG 50071 | |||||||| || | | || | |||||| ||||||||||| | || ||||| ||| Sbjct 1194 AAGTGAGTCCTGGAAGCAACCCTCTCTTTTTCAGCCAAAATATCGCAGCGAATGATCCAC 1135 Query 50072 AAAAGAAGATTCCTTCTACTGCGGCAAAGGCAACAAGTCTCTCTCCATAACTGGCGCTGT 50131 |||| || || |||||||| ||||| || | | |||||| || | | | | | Sbjct 1134 AAAAAAAAATGCCTTCTACACATGCAAAAGCGATTAACCTCTCTGCAAAT---GAGTTAT 1078 Query 50132 CATGT---ATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTA 50188 || | ||||| | ||||||||| ||||||||||| || ||||| | |||||| | Sbjct 1077 CAGATGCAATCCAAGCTAAAGCCCAATCAGCCTTCTTTTTAACGCAAGGTAACGTTTCGA 1018 Query 50189 TGGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGAC 50248 | || ||||| ||| | ||||||||| ||||| | |||||| || || || | | Sbjct 1017 TCGCGTTAAAAAGACACATTTTTTCATCTTCGTCTTTGATATAAGTTTCAATTAACAAGC 958 Query 50249 TATACATTTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCT 50308 |||||||||||| |||||| ||||| || || |||||||| || || || ||| | | Sbjct 957 TATACATTTCCGTATGAATATTTTCCATCGCAATCTGAAAGCCATAAAAGCATTTTATTT 898 Query 50309 CGGTAATCTGCACTTCTGTACAAAATCGTTCAGCTAAATTTTCATTCACTATTCCGTCAC 50368 | | ||| || ||||| | ||||||| | ||| |||||| || || | ||| Sbjct 897 CTGCAATTTGAACTTCGGCTAAAAATCGCTGGACTATATTTTCTAATACAATGCAATCAG 838 Query 50369 TGGCTGCAAAAAACGCCAATACATGTTTTATAAAATGT-TTTTCGTTGGGTGTTAGTTTA 50427 |||||| || || |||| | || || ||||| ||||| | | |||| || Sbjct 837 CATTTGCAAAGAAAGCTAATATGTACTTGAT-GAATGTCTTTTCATCTGTAGTTAATTGG 779 Query 50428 TTCCAATCATTGATATCTTTAGATATATCTACTTCTTCCACTGTCCAAAATGATGCCTCT 50487 | ||| || | | ||| || | || ||| ||||| | |||||||||||||| |||| | Sbjct 778 TACCAGTCTTGTAAATCCTTTGTTAAATCAACTTCATTAACTGTCCAAAATGAAGCCTGT 719 Query 50488 GCCTTTTTATACATATTCCAGATGTCATGATATTGGATTGGGAAAATAACAAA 50540 || ||||||||||| |||| | | || |||||| ||||| || | |||||| Sbjct 718 GCTTTTTTATACATTGTCCAAAATTTATCATATTGTATTGGAAATAGAACAAA 666 >seq456579 Length=1737 Score = 192 bits (212), Expect = 8e-44 Identities = 403/598 (67%), Gaps = 7/598 (1%) Strand=Plus/Minus Query 49951 AACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAA 50010 |||| ||||| |||||||| ||||| | ||||||| | || || ||||||||||| Sbjct 1092 AACAATAAACAAGCGAAATCACAGTGTAACGCCTCGTCGCGGCTGATGAGTTCGTTGGAG 1033 Query 50011 AACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGACCCA 50070 || || || |||||||| || || | || || | ||| ||||| | || || || || Sbjct 1032 AAGGTCAGACCGGGCATCAGACCCCTTTTCTTCAACCAGAATATCGCGGCGAACGATCCG 973 Query 50071 GAAAAGAAGATTCCTTCTACTGCGGCAAAGGCAACAAGTCTCTCTCCATAACTGGC---G 50127 |||||||| |||||||| || ||| || || || |||||| | || ||| Sbjct 972 GAAAAGAAAATTCCTTCGACGATGGCGAAAGCGACGAGTCTCGTGGCGAAAGAGGCTCGA 913 Query 50128 CTGTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCT 50187 || |||| ||||| | | ||||| ||||| |||||||| || || || ||||| Sbjct 912 CTATCATTGATCCATCTCAGGGCCCAGTCGGCTTTCTTTTTCACCGCGGGAATAGTTTCA 853 Query 50188 ATGGCATTAA--AGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAA 50245 || || || | | | || |||||| | | | ||| | | || ||||| || | || Sbjct 852 ATCGCTTTGAGCAAATATCGTTTTTCGCGTGA--ATCCTGGATGTAGGTATCTATGAGAA 795 Query 50246 GACTATACATTTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAG 50305 | | ||||||||||| || |||||||| || |||||||| ||||| || | | | Sbjct 794 GGCCGTACATTTCCGAGTGGATGTTTTCCATCATGATCTGAAACCCGTAAAAGAACCGCG 735 Query 50306 CCTCGGTAATCTGCACTTCTGTACAAAATCGTTCAGCTAAATTTTCATTCACTATTCCGT 50365 | || | |||||| ||||| ||||||| ||| || | |||||| || || |||| Sbjct 734 CTTCTGGAATCTGGACTTCCCTACAAAACCGTGTCGCCAGATTTTCGACAACGATCCCGT 675 Query 50366 CACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATGTTTTTCGTTGGGTGTTAGTT 50425 | || | || ||||| || | | || || |||| ||| ||| | | || Sbjct 674 CGCTTCCCGCGAAAAAGGCGAGGATGTGGGAGATGAAATATTTCTCGCCGTCATTGAGAC 615 Query 50426 TATTCCAATCATTGATATCTTTAGATATATCTACTTCTTCCACTGTCCAAAATGATGCCT 50485 | | ||||| ||||||| | | ||| || || || |||||||| || |||| Sbjct 614 TTTCCCAATGGGGTTTATCTTTGGCGAGATCAACCTCAGCCGTCGTCCAAAAAGAAGCCT 555 Query 50486 CTGCCTTTTTATACATATTCCAGATGTCATGATATTGGATTGGGAAAATAACAAATCT 50543 | || || ||||| ||||| | || | ||||| || |||||||| || ||||| Sbjct 554 CCGCTCGCTTGTACATTTTCCACACATCTTCGTATTGTATCGGGAAAATGACGAATCT 497 >seq817554 Length=629 Score = 136 bits (150), Expect = 5e-27 Identities = 144/190 (76%), Gaps = 0/190 (0%) Strand=Plus/Plus Query 50351 CATTCACTATTCCGTCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATGTTTTT 50410 |||| || || |||||||| || ||||| || ||||| |||||| ||||| || | | Sbjct 265 CATTGACGATACCGTCACTAGCAGCAAAGAAGGCCAACACATGTGAGATAAAGTGCCTCT 324 Query 50411 CGTTGGGTGTTAGTTTATTCCAATCATTGATATCTTTAGATATATCTACTTCTTCCACTG 50470 ||||| | || || | ||| | || || ||||| |||| ||| || |||||||| | Sbjct 325 CGTTGTCATTCAGCTTCTCCCAGTGGTTCATGTCTTTGGATAGATCAACCTCTTCCACCG 384 Query 50471 TCCAAAATGATGCCTCTGCCTTTTTATACATATTCCAGATGTCATGATATTGGATTGGGA 50530 |||| ||||||||||||||||| || ||||| ||||||| || || ||||||| |||| Sbjct 385 TCCAGAATGATGCCTCTGCCTTCTTGTACATCATCCAGATATCTTGGAATTGGATGGGGA 444 Query 50531 AAATAACAAA 50540 | | ||||| Sbjct 445 AGACGACAAA 454 >seq3830724 Length=343 Score = 109 bits (120), Expect = 7e-19 Identities = 108/140 (77%), Gaps = 0/140 (0%) Strand=Plus/Plus Query 49951 AACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAA 50010 |||| |||||| || ||||| ||||||| || ||||| | ||| || |||||||||||| Sbjct 200 AACAGCAAACAGGCAAAATCACAGTGCAACCCTTCGTCGCGACTGATGAGTTCGTTGGAA 259 Query 50011 AACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGACCCA 50070 ||||| | ||| ||||| | || || ||||| | ||| ||||||| || || || || Sbjct 260 AACGTCAATCCCGGCATCAATCCTCGTTTTTTCATCCACAATATGGCGGCGAAAGAACCC 319 Query 50071 GAAAAGAAGATTCCTTCTAC 50090 ||||| || | |||||||| Sbjct 320 GAAAAAAATACACCTTCTAC 339 >seq3953357 Length=757 Score = 102 bits (112), Expect = 1e-16 Identities = 110/146 (75%), Gaps = 0/146 (0%) Strand=Plus/Plus Query 49959 ACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAG 50018 ||| || || ||||||||||| || ||||| || || |||||||||| ||| |||| Sbjct 106 ACAAGCAAAGTCGCAGTGCAGTCCTTCGTCCCTGGAGATCAGTTCGTTGGCAAAGGTGAT 165 Query 50019 TCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGACCCAGAAAAGAA 50078 || || | | || | |||||| | ||| || |||| ||||| || ||||| ||||| Sbjct 166 GCCCGGAAGGATCCCTCTCTTTTTGATCCAGAAGATGGCTGCAAAAGATCCAGAGAAGAA 225 Query 50079 GATTCCTTCTACTGCGGCAAAGGCAA 50104 ||| ||||| || |||||||| |||| Sbjct 226 GATCCCTTCCACGGCGGCAAATGCAA 251 >seq780845 Length=2927 Score = 98.7 bits (108), Expect = 1e-15 Identities = 118/159 (74%), Gaps = 1/159 (1%) Strand=Plus/Plus Query 80686 AGtttt-tttGTTTCCTTGTGTAGATTTGATACGGCTATTCTGGCGGCTAAAATGGCATA 80744 |||||| ||||||||||| || || || ||||| || || | ||| |||||||| ||||| Sbjct 2453 AGTTTTCTTTGTTTCCTTATGGAGGTTGGATACTGCAATACGGGCTGCTAAAATTGCATA 2512 Query 80745 ATCTGGATGTTGTGTAGTACAAGTGGCTGCTATTTCGGCTGCCAGAGTGTCCAATTCTAC 80804 ||| ||||| | || || || || || | || ||||| || ||||||||||| || Sbjct 2513 ATCCGGATGCTTCGTTGTCATGGTAGCAGCAGTCTCAGCTGCAAGTGTGTCCAATTCAAC 2572 Query 80805 CGTTGTTACTCCATTATATATTCCTTGGATAACCTTCAT 80843 || || ||||||| || || || ||| || ||||| Sbjct 2573 TGTGGTAACTCCATGGTAGATCCCGCTGATCACTTTCAT 2611 >seq718041 Length=1499 Score = 98.7 bits (108), Expect = 1e-15 Identities = 149/210 (71%), Gaps = 4/210 (2%) Strand=Plus/Plus Query 80109 GTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGTACCATT 80168 |||||| |||||||| || || || ||||||||||| || | ||||| ||||||||||| Sbjct 391 GTATCTTGCGGTGTTGTTGTATACCCTCAACATTGGTATTAAGCCATTTGATGTACCATT 450 Query 80169 GGTCCCGGAGATATAGCTTCCACTGGCACGAAT--ATTACTAATTGATAGACCTATTCCC 80226 ||| || | |||||||||||| || | ||| | | |||| || |||| ||| Sbjct 451 GGTGCCAGCAATATAGCTTCCAGATGCTCTAATGCAGTGAACATTG--AGGCCTACACCC 508 Query 80227 CCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATGCTA 80286 ||||| | || ||||| | ||||| | || | || || ||||| || ||||| || Sbjct 509 CCTGCTGTCTTTGAGATGAGGGCGCACTGCTTCAGTGTGTCGTAGATTCCTTCTATACTG 568 Query 80287 TCATCAATCATGTTAAGTAGAAAACAGCTA 80316 || |||| | || || ||||| ||| Sbjct 569 TCTGATGCCATGGTGAGCAGGAAACAACTA 598 >seq3878943 Length=409 Score = 96.9 bits (106), Expect = 5e-15 Identities = 113/153 (74%), Gaps = 0/153 (0%) Strand=Plus/Minus Query 49959 ACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAG 50018 ||| || || |||||||||| ||||||||||| ||| || || ||| |||| | Sbjct 256 ACAGGCAAAGTCGCAGTGCATGCCCTCGTCTCTGGAAATAAGCTCATTGAAAAATAATAC 197 Query 50019 TCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGACCCAGAAAAGAA 50078 || ||||| || || || || || ||||| | ||| | ||||| || |||||||| Sbjct 196 ACCTGGCATAAGACCGCGTTTCTTGAGCCAGACTATCGCCGCAAGGCTTCCGGAAAAGAA 137 Query 50079 GATTCCTTCTACTGCGGCAAAGGCAACAAGTCT 50111 || |||||||| | |||||||||||| ||||| Sbjct 136 AATACCTTCTACGGGGGCAAAGGCAACCAGTCT 104 >seq805419 Length=1311 Score = 96.9 bits (106), Expect = 5e-15 Identities = 113/153 (74%), Gaps = 0/153 (0%) Strand=Plus/Plus Query 49959 ACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAG 50018 ||| || || ||||||||| || |||||||| || || ||||||||||| | || Sbjct 1079 ACAGGCAAAGCCGCAGTGCATGCCATCGTCTCTGGAGATGAGCTCGTTGGAAAAGGACAG 1138 Query 50019 TCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGACCCAGAAAAGAA 50078 || |||| || || || || || ||||| ||||| | |||||| || ||||| || Sbjct 1139 ACCCGGCACGAGACCGCGTTTCTTGAGCCAGAATATCGCCGCAAAGCTTCCCGAAAAAAA 1198 Query 50079 GATTCCTTCTACTGCGGCAAAGGCAACAAGTCT 50111 ||| || || || ||||||||||| || ||||| Sbjct 1199 GATGCCCTCGACAGCGGCAAAGGCCACCAGTCT 1231 >seq3489149 Length=195 Score = 89.7 bits (98), Expect = 7e-13 Identities = 136/192 (71%), Gaps = 4/192 (2%) Strand=Plus/Minus Query 50330 AAAATCGTTCAGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAACGCCAATA 50389 |||| ||| ||||||||||| |||||||||||||| | |||||||| || || | Sbjct 190 AAAACCGTGTCGCTAAATTTTCGCCAACTATTCCGTCACTAGTGGCAAAAAAGGCTAAAA 131 Query 50390 CATGTTTTATAAAATGTTTTTCGT--TGGGTGTTAGTTTATTCCAATCATTGATATCTTT 50447 || | | |||| | | || | |||| || | |||||| ||| ||||| || Sbjct 130 TGTGCGTGAGGAAATATCTCTCACCCTCGGTGAGAGCGT--TCCAATGATTTATATCCTT 73 Query 50448 AGATATATCTACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACATATTCCA 50507 || | ||||||||| |||| ||||||||||| ||||| || | || ||||| ||| Sbjct 72 GGAAAGATCTACTTCGGCCACCGTCCAAAATGACGCCTCCTCCCTCTTGTACATTCGCCA 13 Query 50508 GATGTCATGATA 50519 ||||| |||| Sbjct 12 AATGTCGGGATA 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 682640135622480