Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ophionereis_20fasciata_20[genbank_20GCA_5F900067615.1_202017-02-27] 3,968,282 sequences; 1,184,528,790 total letters Query= NC_004105.1 Length=209771 Score E Sequences producing significant alignments: (Bits) Value seq760737 320 2e-82 seq718041 105 9e-18 seq3830724 95.1 2e-14 seq780845 95.1 2e-14 seq3953357 91.5 2e-13 seq3489149 91.5 2e-13 seq456579 87.8 2e-12 seq805419 82.4 1e-10 >seq760737 Length=2966 Score = 320 bits (354), Expect = 2e-82 Identities = 609/891 (68%), Gaps = 7/891 (1%) Strand=Plus/Minus Query 41760 ACATAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTCTTTCCTT 41819 ||||||| || ||||||||| || || || | |||||| ||||| |||| || |||| Sbjct 1554 ACATAACCCCTGATTTTTGGTACTCGCCAACTCTTTTTTCAAAAAAGTTAGATTTCCCTT 1495 Query 41820 CCAATGATATATTTTCCATGAAATCAAACGGATTGGTAACATTATAAAtttttttAAATC 41879 | | ||| ||||| ||||| || |||||||| || || | | | | |||||| | | Sbjct 1494 CAATTGAAATATTATCCATAAAGTCAAACGGGTTTTTAGCGCGAAATAACTTTTTACAAC 1435 Query 41880 CCAATTCAGAAATCAATCTATCTGCGATGAATTCTATATATGTTTTCATCATTTCACAAT 41939 ||||||| || | | ||||| | ||||||||||| |||||| | || || Sbjct 1434 CCAATTCTACAAGAAGACGGTCTGCCACAAATTCTATATACTGTTTCATAAGATCTTTAT 1375 Query 41940 TCATTCCTATAAGTTTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATAGAGACCG 41999 ||||||| || | |||| || ||| || ||| |||| ||| ||| ||| | Sbjct 1374 TCATTCCAATCATTTTATTCGGGCATGCCGTTTCAAAAAAATCTTTTTCGATATCGACTG 1315 Query 42000 CGTCTGTTATAATAGATCTTACTGTTTC-TTCACTCGGTG---GATACAATAAATGTTTA 42055 |||| | ||| | | | || | |||| ||||| | | || | | | || Sbjct 1314 CGTCACCAACAATTT-TGTAAATGATGGATTCATTCGGTTTTTGTTTTAAGCACTCTCTA 1256 Query 42056 AACATCAAACATGCGAAATCGCAGTGCAGACCCTCATCTCTACTAATTAATTCGTTGGAA 42115 |||| | || | |||||||| || | || || |||||| |||||||||||| ||| Sbjct 1255 AACACAAGGCAAGAAAAATCGCAATGTAAGCCTTCGTCTCTAGAAATTAATTCGTTTGAA 1196 Query 42116 AACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATAGACGCAAATGATCCA 42175 || |||||||| || | | || | |||||| ||||||||||| | || ||||||||| Sbjct 1195 AAAGTGAGTCCTGGAAGCAACCCTCTCTTTTTCAGCCAAAATATCGCAGCGAATGATCCA 1136 Query 42176 GAAAAGAAGATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCGGCACTG 42235 |||| || || |||||||| ||||| || || | |||||| || | | | | Sbjct 1135 CAAAAAAAAATGCCTTCTACACATGCAAAAGCGATTAACCTCTCTGCAAATGAGTTA-TC 1077 Query 42236 TCATGTA-TCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTAT 42294 ||| | |||| | ||||||||| ||||||||||| || ||||| | |||||| || Sbjct 1076 AGATGCAATCCAAGCTAAAGCCCAATCAGCCTTCTTTTTAACGCAAGGTAACGTTTCGAT 1017 Query 42295 GGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCGATCAAAAGACT 42354 || ||||| ||| | ||||||||| ||||| | ||| || || || || | || Sbjct 1016 CGCGTTAAAAAGACACATTTTTTCATCTTCGTCTTTGATATAAGTTTCAATTAACAAGCT 957 Query 42355 ATACATTTCTGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTGGCCTC 42414 ||||||||| | |||||| ||||| || || |||||||| || || || ||| | || Sbjct 956 ATACATTTCCGTATGAATATTTTCCATCGCAATCTGAAAGCCATAAAAGCATTTTATTTC 897 Query 42415 GGTAACCTGTACTTCTGTACAAAATCGTTCAGCTAAATTTTCGTTCACTATTCCGTCACT 42474 | || || ||||| | ||||||| | ||| |||||| || || | ||| Sbjct 896 TGCAATTTGAACTTCGGCTAAAAATCGCTGGACTATATTTTCTAATACAATGCAATCAGC 837 Query 42475 GGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCCGGTGTTAATTTATT 42534 |||||| || || |||| | || || || ||||| || | ||||||| | Sbjct 836 ATTTGCAAAGAAAGCTAATATGTACTTGATGAATGTCTTTTCATCTGTAGTTAATTGGTA 777 Query 42535 CCAATCATTGATATCTTTAGATATATCTACTTCTTCTACCGTCCAAAATGATGCTTCTGC 42594 ||| || | | ||| || | || ||| ||||| | || ||||||||||| || | ||| Sbjct 776 CCAGTCTTGTAAATCCTTTGTTAAATCAACTTCATTAACTGTCCAAAATGAAGCCTGTGC 717 Query 42595 CTTTTTATACATATTCCAGATATCATGATATTGAATTGGGAAAATAACAAA 42645 ||||||||||| |||| | | || |||||| ||||| || | |||||| Sbjct 716 TTTTTTATACATTGTCCAAAATTTATCATATTGTATTGGAAATAGAACAAA 666 >seq718041 Length=1499 Score = 105 bits (116), Expect = 9e-18 Identities = 153/212 (72%), Gaps = 8/212 (4%) Strand=Plus/Plus Query 72192 GTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGCACCATT 72251 |||||| |||||||| || || || ||||||||||| || | ||||| |||| |||||| Sbjct 391 GTATCTTGCGGTGTTGTTGTATACCCTCAACATTGGTATTAAGCCATTTGATGTACCATT 450 Query 72252 GGTCCCGGAGATATAGCTTCCACTGGCACGAAT--ATTGCTAATTGATAGACCTATTCCC 72309 ||| || | |||||||||||| || | ||| | || |||| || |||| ||| Sbjct 451 GGTGCCAGCAATATAGCTTCCAGATGCTCTAATGCAGTGAACATTG--AGGCCTACACCC 508 Query 72310 CCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTA 72369 ||||| | || ||||| | ||||| | || | || || ||||| || |||||||| Sbjct 509 CCTGCTGTCTTTGAGATGAGGGCGCACTGCTTCAGTGTGTCGTAGATTCCTTCTATACTG 568 Query 72370 TC--ATCCATCATGTTAAGTAGAAAACAGCTA 72399 || || | |||| | || || ||||| ||| Sbjct 569 TCTGATGC--CATGGTGAGCAGGAAACAACTA 598 >seq3830724 Length=343 Score = 95.1 bits (104), Expect = 2e-14 Identities = 105/140 (75%), Gaps = 0/140 (0%) Strand=Plus/Plus Query 42056 AACATCAAACATGCGAAATCGCAGTGCAGACCCTCATCTCTACTAATTAATTCGTTGGAA 42115 |||| |||||| || ||||| ||||||| || || || | ||| || | |||||||||| Sbjct 200 AACAGCAAACAGGCAAAATCACAGTGCAACCCTTCGTCGCGACTGATGAGTTCGTTGGAA 259 Query 42116 AACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATAGACGCAAATGATCCA 42175 ||||| | ||| ||||| | || || ||||| | ||| ||||| | || || || || Sbjct 260 AACGTCAATCCCGGCATCAATCCTCGTTTTTTCATCCACAATATGGCGGCGAAAGAACCC 319 Query 42176 GAAAAGAAGATTCCTTCTAC 42195 ||||| || | |||||||| Sbjct 320 GAAAAAAATACACCTTCTAC 339 >seq780845 Length=2927 Score = 95.1 bits (104), Expect = 2e-14 Identities = 117/159 (74%), Gaps = 1/159 (1%) Strand=Plus/Plus Query 72769 AGtttt-tttGTTTCCTTGTGTAGATTTGATACGGCTATTCTGGCGGCTAGAATGGCATA 72827 |||||| ||||||||||| || || || ||||| || || | ||| |||| ||| ||||| Sbjct 2453 AGTTTTCTTTGTTTCCTTATGGAGGTTGGATACTGCAATACGGGCTGCTAAAATTGCATA 2512 Query 72828 ATCTGGATGTTGTGTAGTACAAGTGGCTGCTATTTCTGCTGCCAGAGTGTCCAATTCTAC 72887 ||| ||||| | || || || || || | || ||||| || ||||||||||| || Sbjct 2513 ATCCGGATGCTTCGTTGTCATGGTAGCAGCAGTCTCAGCTGCAAGTGTGTCCAATTCAAC 2572 Query 72888 CGTTGTTACTCCATTATATATTCCTTGGATAACCTTCAT 72926 || || ||||||| || || || ||| || ||||| Sbjct 2573 TGTGGTAACTCCATGGTAGATCCCGCTGATCACTTTCAT 2611 >seq3953357 Length=757 Score = 91.5 bits (100), Expect = 2e-13 Identities = 112/153 (73%), Gaps = 0/153 (0%) Strand=Plus/Plus Query 42064 ACATGCGAAATCGCAGTGCAGACCCTCATCTCTACTAATTAATTCGTTGGAAAACGTGAG 42123 ||| || || ||||||||||| || || || || || | |||||||| ||| |||| Sbjct 106 ACAAGCAAAGTCGCAGTGCAGTCCTTCGTCCCTGGAGATCAGTTCGTTGGCAAAGGTGAT 165 Query 42124 TCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATAGACGCAAATGATCCAGAAAAGAA 42183 || || | | || | |||||| | ||| || || | ||||| |||||||| ||||| Sbjct 166 GCCCGGAAGGATCCCTCTCTTTTTGATCCAGAAGATGGCTGCAAAAGATCCAGAGAAGAA 225 Query 42184 GATTCCTTCTACTGCCGCAAAGGCAATAAGTCT 42216 ||| ||||| || || ||||| ||||| |||| Sbjct 226 GATCCCTTCCACGGCGGCAAATGCAATCTGTCT 258 >seq3489149 Length=195 Score = 91.5 bits (100), Expect = 2e-13 Identities = 134/190 (71%), Gaps = 0/190 (0%) Strand=Plus/Minus Query 42435 AAAATCGTTCAGCTAAATTTTCGTTCACTATTCCGTCACTGGCTGCAAAAAACGCCAATA 42494 |||| ||| |||||||||||| |||||||||||||| | |||||||| || || | Sbjct 190 AAAACCGTGTCGCTAAATTTTCGCCAACTATTCCGTCACTAGTGGCAAAAAAGGCTAAAA 131 Query 42495 CATGTTTTATAAAATATTTTTCGTCCGGTGTTAATTTATTCCAATCATTGATATCTTTAG 42554 || | | |||||| | || || || | ||||||| ||| ||||| || | Sbjct 130 TGTGCGTGAGGAAATATCTCTCACCCTCGGTGAGAGCGTTCCAATGATTTATATCCTTGG 71 Query 42555 ATATATCTACTTCTTCTACCGTCCAAAATGATGCTTCTGCCTTTTTATACATATTCCAGA 42614 | | ||||||||| | |||||||||||||| || || || | || ||||| ||| | Sbjct 70 AAAGATCTACTTCGGCCACCGTCCAAAATGACGCCTCCTCCCTCTTGTACATTCGCCAAA 11 Query 42615 TATCATGATA 42624 | || |||| Sbjct 10 TGTCGGGATA 1 >seq456579 Length=1737 Score = 87.8 bits (96), Expect = 2e-12 Identities = 82/104 (79%), Gaps = 3/104 (3%) Strand=Plus/Minus Query 41750 TCTTCTTGAGAC---ATAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAA 41806 |||||| | ||| ||||| ||| | ||||||||||| || || | ||||||||| ||| Sbjct 1464 TCTTCTGGCGACGTCATAACGCCCGTCTTTTGGTATTCCCCTACTCTTTTTTCGAAGAAA 1405 Query 41807 TTAGTCTTTCCTTCCAATGATATATTTTCCATGAAATCAAACGG 41850 || |||| ||||| | |||||||| ||||| |||||||| || Sbjct 1404 TTGCTCTTCCCTTCTAGGGATATATTCTCCATAAAATCAAAAGG 1361 >seq805419 Length=1311 Score = 82.4 bits (90), Expect = 1e-10 Identities = 110/153 (72%), Gaps = 0/153 (0%) Strand=Plus/Plus Query 42064 ACATGCGAAATCGCAGTGCAGACCCTCATCTCTACTAATTAATTCGTTGGAAAACGTGAG 42123 ||| || || ||||||||| || || ||||| || | ||||||||||| | || Sbjct 1079 ACAGGCAAAGCCGCAGTGCATGCCATCGTCTCTGGAGATGAGCTCGTTGGAAAAGGACAG 1138 Query 42124 TCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATAGACGCAAATGATCCAGAAAAGAA 42183 || |||| || || || || || ||||| ||||| | |||||| ||| ||||| || Sbjct 1139 ACCCGGCACGAGACCGCGTTTCTTGAGCCAGAATATCGCCGCAAAGCTTCCCGAAAAAAA 1198 Query 42184 GATTCCTTCTACTGCCGCAAAGGCAATAAGTCT 42216 ||| || || || || |||||||| | ||||| Sbjct 1199 GATGCCCTCGACAGCGGCAAAGGCCACCAGTCT 1231 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 637848329914320