Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ophionereis_20fasciata_20[genbank_20GCA_5F900067615.1_202017-02-27] 3,968,282 sequences; 1,184,528,790 total letters Query= NC_006882.2 Length=45176 Score E Sequences producing significant alignments: (Bits) Value seq577692 324 4e-84 seq3816217 183 8e-42 seq3751544 172 2e-38 seq3509123 104 6e-18 >seq577692 Length=2825 Score = 324 bits (358), Expect = 4e-84 Identities = 495/702 (71%), Gaps = 4/702 (1%) Strand=Plus/Plus Query 19288 AGTTTTGTGAGTGGGTCACAAGTACCGAGAACCGCCTTTATGTAGGTTGGTTTGGAGTAC 19347 ||||||| ||||| ||| |||| | |||||||||||||||||||||||||| | Sbjct 172 AGTTTTGCACTTGGGTAACATCTACCAATAACCGCCTTTATGTAGGTTGGTTTGGTATTG 231 Query 19348 TTATGATTCCTTGCTTACTAGCTGCTACTACTTGCTTTATACTCGCCTTTATCGCAGCAC 19407 | ||||| ||| ||| ||| |||| || | || ||| | | || ||| | || |||| Sbjct 232 TGATGATCCCTACCTTGCTAACTGCCACCATCTGTTTTGTGTTAGCTTTTGTAGCTGCAC 291 Query 19408 CGCCTGTAGATATAGATGGCATACGTGAGCCAGTTTCCGGCTCGTTAATGTACGGAAACA 19467 | ||||| ||||| || ||||| || || || |||||||| || | ||||||| || | Sbjct 292 CTCCTGTGGATATTGACGGCATCCGCGAACCCGTTTCCGGTTCTCTGTTGTACGGCAATA 351 Query 19468 ATATTATTTCTGGAGCAGTAGTTCCAAGCTCCAATGCAATAGGACTGCACTTTTATCCGA 19527 | || || | | || || || || || || ||||| || || ||||||||||||| | Sbjct 352 ACATCATCACCGCCGCTGTTGTACCCAGTTCTAATGCGATTGGGTTGCACTTTTATCCCA 411 Query 19528 TCTGGGAAGCCGGCACTTTAGATGAGTGGTTATACAACGGCGGTCCATATCAACTTGTTG 19587 |||||||||| | | | | ||||| ||| | || |||||||| || || || | ||| Sbjct 412 TCTGGGAAGCGGCAAATATTGATGAATGGCTTTATAACGGCGGCCCCTACCAGTTGATTG 471 Query 19588 TCTTCCACTTCTTAATAGG-AGTAGCAGC-ATACGCTGGTAGACAGTGGGAACTATCTTA 19645 | ||||||||| |||| || | | || ||| | ||| | |||||||||| ||||| Sbjct 472 TTTTCCACTTCCTAATCGGCATTTTTTGCTATATG--GGTCGTGAGTGGGAACTGTCTTA 529 Query 19646 CAGATTAGGAATGAGACCATGGATATTCGTAGCATATACAGCACCACTATCAGCAGCTCT 19705 | ||||||||| | || ||||| || || |||| || || || | || || Sbjct 530 TCGGTTAGGAATGCGTCCTTGGATTGCTGTTGCTTATAGCGCTCCTGTAGCTGCTGCGAC 589 Query 19706 TGCTGTGTTTCTCGTTTACCCATTTGGGCAAGGGAGTTTTAGTGATGGTATGCCTCTTGG 19765 || || | | ||||| | | || ||||| |||| ||||||| | || || || Sbjct 590 GGCGGTACTGTTAGTTTATTCTATCGGTCAAGGTTCTTTTTCTGATGGTTTACCGCTGGG 649 Query 19766 TATCTCTGGTACTTTTAACTTTATGTTCGTATTCCAAGCAGAACACAATATCCTTATGCA 19825 || ||||| || |||||||||||||| || | |||||||| || ||| | | ||||| Sbjct 650 GATTTCTGGCACATTTAACTTTATGTTAGTGCTGCAAGCAGAGCATAATGTTTTAATGCA 709 Query 19826 TCCGTTCCACATGCTCGGTGTTGCTGGCGTATTCGGTGGATCTCTTTTCTCTGCTATGCA 19885 || ||||| ||||| || || ||||| || || ||||| |||||||||| |||||||| Sbjct 710 CCCCTTCCATATGCTGGGAGTAGCTGGTGTCTTTGGTGGCGCTCTTTTCTCAGCTATGCA 769 Query 19886 CGGAAGTTTGGTTACTTCCTCGATCATCAAGGAAACAACTGAGGATGTATCGCAGAACTA 19945 ||| | |||| || || || | | ||||| ||||| || | || ||| Sbjct 770 CGGTTCTCTGGTGACATCTTCTTTAGTACGTGAAACCACTGAAATTGAAAGCCAAAACCG 829 Query 19946 TGGCTATAAGTTCGGGCAAGATGAAGAGACATATAATATTGT 19987 || ||| || || ||||| ||||| || ||||| ||||| Sbjct 830 GGGTTATCGCTTTGGACAAGAAGAAGAAACTTATAACATTGT 871 >seq3816217 Length=329 Score = 183 bits (202), Expect = 8e-42 Identities = 238/329 (72%), Gaps = 0/329 (0%) Strand=Plus/Plus Query 19797 TTCCAAGCAGAACACAATATCCTTATGCATCCGTTCCACATGCTCGGTGTTGCTGGCGTA 19856 ||||||||||||||||| ||||| ||||| || ||||| ||| | || |||||||| ||| Sbjct 1 TTCCAAGCAGAACACAACATCCTGATGCACCCCTTCCATATGTTGGGAGTTGCTGGTGTA 60 Query 19857 TTCGGTGGATCTCTTTTCTCTGCTATGCACGGAAGTTTGGTTACTTCCTCGATCATCAAG 19916 |||||||| || | ||||| || |||||||| |||||| ||||| || | | Sbjct 61 TTCGGTGGTGCTTTGTTCTCCGCGATGCACGGTTCTTTGGTAACTTCTTCCTTGGTGCGT 120 Query 19917 GAAACAACTGAGGATGTATCGCAGAACTATGGCTATAAGTTCGGGCAAGATGAAGAGACA 19976 ||||| || || | ||| || ||||| || || || ||||| ||||| ||||| || Sbjct 121 GAAACCACCGAAATCGAATCTCAAAACTACGGTTACAAATTCGGTCAAGAAGAAGAAACC 180 Query 19977 TATAATATTGTCGCTGCACACGGGTACTTTGGGAGATTGATATTTCAATATGCTTCTTTC 20036 || || ||||| || || ||||| ||||| || | |||| || ||||||||||||||| Sbjct 181 TACAACATTGTGGCAGCTCACGGTTACTTCGGTCGCCTGATCTTCCAATATGCTTCTTTC 240 Query 20037 AATAATTCTCGTTCTTTACATTTCTTTCTTGCTACTTTCCCCGTGGTTGGCATATGGCTT 20096 || || ||||| | || ||||| | | | ||| || || | ||||| ||| | Sbjct 241 AACAACAGCCGTTCCCTGCACTTCTTCTTGGGTGCTTGGCCGGTAATCGGCATCTGGTTC 300 Query 20097 ACCTCCATGGGAATCTGCACTATGGCTTT 20125 ||| | | || | | ||| ||||| || Sbjct 301 ACCGCTTTAGGTGTATCCACCATGGCCTT 329 >seq3751544 Length=281 Score = 172 bits (190), Expect = 2e-38 Identities = 203/275 (74%), Gaps = 0/275 (0%) Strand=Plus/Plus Query 19299 TGGGTCACAAGTACCGAGAACCGCCTTTATGTAGGTTGGTTTGGAGTACTTATGATTCCT 19358 ||||| ||| ||| | ||||||||||||||||| ||||| || || || ||||| ||| Sbjct 7 TGGGTAACATCCACCAACAACCGCCTTTATGTAGGCTGGTTCGGTGTTCTGATGATCCCT 66 Query 19359 TGCTTACTAGCTGCTACTACTTGCTTTATACTCGCCTTTATCGCAGCACCGCCTGTAGAT 19418 | ||||| ||||||| | |||| || |||| |||||||| || || || || || Sbjct 67 ACCCTACTAACTGCTACCATCTGCTACATCATCGCTTTTATCGCTGCTCCCCCCGTGGAC 126 Query 19419 ATAGATGGCATACGTGAGCCAGTTTCCGGCTCGTTAATGTACGGAAACAATATTATTTCT 19478 || || || || || || || || | || || | ||||||| ||||| || || ||| Sbjct 127 ATTGACGGTATCCGCGAACCCGTAGCTGGTTCTCTGTTGTACGGCAACAACATCATCTCT 186 Query 19479 GGAGCAGTAGTTCCAAGCTCCAATGCAATAGGACTGCACTTTTATCCGATCTGGGAAGCC 19538 || || || ||||| ||||||||| || || |||||||| || || || |||||||| Sbjct 187 GGTGCGGTTGTTCCTTCCTCCAATGCGATCGGTCTGCACTTCTACCCCATTTGGGAAGCA 246 Query 19539 GGCACTTTAGATGAGTGGTTATACAACGGCGGTCC 19573 | || || ||||| ||| | |||||||| || || Sbjct 247 GCCAGCTTGGATGAATGGCTCTACAACGGTGGCCC 281 >seq3509123 Length=199 Score = 104 bits (114), Expect = 6e-18 Identities = 114/152 (75%), Gaps = 0/152 (0%) Strand=Plus/Plus Query 20133 AATGGTTTTAACTTTAACCAGTCAGTAGTTGATGTCAACGGAAAGATAATCCCAACATGG 20192 || ||||| ||||| ||||| || ||| | || || ||| | || | || ||| Sbjct 1 AACGGTTTCAACTTCAACCAATCCGTAATGGACTCCAGCGGTCGGGTAGTTAACACCTGG 60 Query 20193 GCTGATGTATTAAATAGAGCTAACCTCGGATTTGAAGTTATGCACGAGCGCAATGCTCAT 20252 |||||||| | || | |||||||| || | ||||| |||||||||||||| ||||| Sbjct 61 GCTGATGTCATCAACCGCGCTAACCTGGGTATGGAAGTAATGCACGAGCGCAACGCTCAC 120 Query 20253 AACTTCCCACTTGATTTAGCTTCGGCTGAGTC 20284 |||||||| | ||||||||||| |||||||| Sbjct 121 AACTTCCCCTTAGATTTAGCTTCTGCTGAGTC 152 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 137635028109192