Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ophionereis_20fasciata_20[genbank_20GCA_5F900067615.1_202017-02-27] 3,968,282 sequences; 1,184,528,790 total letters Query= NC_006883.2 Length=252401 Score E Sequences producing significant alignments: (Bits) Value seq577692 405 8e-108 seq3816217 242 6e-59 seq3751544 228 1e-54 seq3172301 127 3e-24 seq369660 114 2e-20 seq3509123 98.7 2e-15 >seq577692 Length=2825 Score = 405 bits (448), Expect = 8e-108 Identities = 512/701 (73%), Gaps = 2/701 (0%) Strand=Plus/Plus Query 211568 AGTTCTGCGACTGGGTAACATCAACAAACAACAGAATCTATGTTGGTTGGTTTGGTGTTC 211627 |||| ||| ||||||||||| || || ||| | | ||||| |||||||||||| || Sbjct 172 AGTTTTGCACTTGGGTAACATCTACCAATAACCGCCTTTATGTAGGTTGGTTTGGTATTG 231 Query 211628 TTATGATCCCATGTCTT-CTAGCTGCAACAACATGCTTTATCGTAGCATTCATCGCAGCA 211686 | |||||||| | ||| ||| |||| || | || ||| | |||| || | || ||| Sbjct 232 TGATGATCCC-TACCTTGCTAACTGCCACCATCTGTTTTGTGTTAGCTTTTGTAGCTGCA 290 Query 211687 CCTCCCGTTGATATCGACGGAATCCGTGAACCAGTAGCTGGTTCATTCATGTATGGTAAC 211746 ||||| || ||||| ||||| ||||| ||||| || | ||||| | |||| || || Sbjct 291 CCTCCTGTGGATATTGACGGCATCCGCGAACCCGTTTCCGGTTCTCTGTTGTACGGCAAT 350 Query 211747 AACATCATCTCTGGTGCAGTTGTTCCATCTTCAAACGCAATCGGTTTACACTTCTATCCT 211806 ||||||||| | | || ||||| || ||| || || || || || ||||| ||||| Sbjct 351 AACATCATCACCGCCGCTGTTGTACCCAGTTCTAATGCGATTGGGTTGCACTTTTATCCC 410 Query 211807 ATCTGGGAAGCAGCAACTCTTGATGAGTGGCTCTACAATGGTGGTCCTTACCAGTTGGTA 211866 ||||||||||| |||| | ||||||| ||||| || || || || || ||||||||| | Sbjct 411 ATCTGGGAAGCGGCAAATATTGATGAATGGCTTTATAACGGCGGCCCCTACCAGTTGATT 470 Query 211867 ATCTTCCACTTCCTTATCGGAATCTCAGCATACATGGGAAGACAGTGGGAACTTTCATAC 211926 | ||||||||||| ||||| || | || ||||| | |||||||||| || || Sbjct 471 GTTTTCCACTTCCTAATCGGCATTTTTTGCTATATGGGTCGTGAGTGGGAACTGTCTTAT 530 Query 211927 CGTTTAGGTATGCGTCCTTGGATCTGTGTTGCTTATTCAGCACCTGTATCAGCAGCTTTC 211986 || ||||| |||||||||||||| |||||||||| || |||||| | || || Sbjct 531 CGGTTAGGAATGCGTCCTTGGATTGCTGTTGCTTATAGCGCTCCTGTAGCTGCTGCGACG 590 Query 211987 GCTGTATTCCTTGTTTACCCATTCGGTCAGGGTTCATTCTCAGACGGTATGCCTTTAGGT 212046 || ||| | | ||||| | ||||||| ||||| || || || ||| | || | || Sbjct 591 GCGGTACTGTTAGTTTATTCTATCGGTCAAGGTTCTTTTTCTGATGGTTTACCGCTGGGG 650 Query 212047 ATATCAGGAACATTCAACTTCATGTTCGTATTCCAAGCAGAACATAACATCCTTATGCAC 212106 || || || ||||| ||||| ||||| || | |||||||| ||||| | | |||||| Sbjct 651 ATTTCTGGCACATTTAACTTTATGTTAGTGCTGCAAGCAGAGCATAATGTTTTAATGCAC 710 Query 212107 CCATTCCATATGGCAGGTGTTGCAGGTATGTTCGGTGGAGCATTATTCTCTGCTATGCAC 212166 || ||||||||| || || || ||| | || ||||| || | ||||| ||||||||| Sbjct 711 CCCTTCCATATGCTGGGAGTAGCTGGTGTCTTTGGTGGCGCTCTTTTCTCAGCTATGCAC 770 Query 212167 GGTTCTCTTGTTACATCTTCACTTATCCGTGAAACCACTGGTTTAGATTCACAGAACTAT 212226 |||||||| || |||||||| | | ||||||||||||| | || || ||| Sbjct 771 GGTTCTCTGGTGACATCTTCTTTAGTACGTGAAACCACTGAAATTGAAAGCCAAAACCGG 830 Query 212227 GGTTACAAGTTCGGACAAGAAGAAGAGACATATAACATCGT 212267 ||||| || |||||||||||||| || |||||||| || Sbjct 831 GGTTATCGCTTTGGACAAGAAGAAGAAACTTATAACATTGT 871 >seq3816217 Length=329 Score = 242 bits (268), Expect = 6e-59 Identities = 251/329 (76%), Gaps = 0/329 (0%) Strand=Plus/Plus Query 212077 TTCCAAGCAGAACATAACATCCTTATGCACCCATTCCATATGGCAGGTGTTGCAGGTATG 212136 |||||||||||||| |||||||| |||||||| ||||||||| || ||||| ||| | Sbjct 1 TTCCAAGCAGAACACAACATCCTGATGCACCCCTTCCATATGTTGGGAGTTGCTGGTGTA 60 Query 212137 TTCGGTGGAGCATTATTCTCTGCTATGCACGGTTCTCTTGTTACATCTTCACTTATCCGT 212196 |||||||| || || ||||| || |||||||||||| | || || ||||| | | ||| Sbjct 61 TTCGGTGGTGCTTTGTTCTCCGCGATGCACGGTTCTTTGGTAACTTCTTCCTTGGTGCGT 120 Query 212197 GAAACCACTGGTTTAGATTCACAGAACTATGGTTACAAGTTCGGACAAGAAGAAGAGACA 212256 |||||||| | | || || || ||||| |||||||| ||||| ||||||||||| || Sbjct 121 GAAACCACCGAAATCGAATCTCAAAACTACGGTTACAAATTCGGTCAAGAAGAAGAAACC 180 Query 212257 TATAACATCGTTGCTGCACATGGATACTTCGGTAGACTTATCTTCCAGTATGCATCATTC 212316 || ||||| || || || || || ||||||||| | || |||||||| ||||| || ||| Sbjct 181 TACAACATTGTGGCAGCTCACGGTTACTTCGGTCGCCTGATCTTCCAATATGCTTCTTTC 240 Query 212317 AACAACAGCAGAAGTTTACACTTCTTCCTCGCATCATGGCCTGTTATCTGTGTATGGTTA 212376 ||||||||| | | ||||||||| | | | ||||| || ||| | | ||||| Sbjct 241 AACAACAGCCGTTCCCTGCACTTCTTCTTGGGTGCTTGGCCGGTAATCGGCATCTGGTTC 300 Query 212377 ACCTCTATGGGTATCTGCACAATGGCATT 212405 ||| || | ||| | | ||| ||||| || Sbjct 301 ACCGCTTTAGGTGTATCCACCATGGCCTT 329 >seq3751544 Length=281 Score = 228 bits (252), Expect = 1e-54 Identities = 216/276 (78%), Gaps = 0/276 (0%) Strand=Plus/Plus Query 211578 CTGGGTAACATCAACAAACAACAGAATCTATGTTGGTTGGTTTGGTGTTCTTATGATCCC 211637 |||||||||||| || |||||| | | ||||| || ||||| |||||||| |||||||| Sbjct 6 CTGGGTAACATCCACCAACAACCGCCTTTATGTAGGCTGGTTCGGTGTTCTGATGATCCC 65 Query 211638 ATGTCTTCTAGCTGCAACAACATGCTTTATCGTAGCATTCATCGCAGCACCTCCCGTTGA 211697 || ||| |||| || | |||| ||| | || || ||||| || || ||||| || Sbjct 66 TACCCTACTAACTGCTACCATCTGCTACATCATCGCTTTTATCGCTGCTCCCCCCGTGGA 125 Query 211698 TATCGACGGAATCCGTGAACCAGTAGCTGGTTCATTCATGTATGGTAACAACATCATCTC 211757 || ||||| ||||| ||||| ||||||||||| | |||| || |||||||||||||| Sbjct 126 CATTGACGGTATCCGCGAACCCGTAGCTGGTTCTCTGTTGTACGGCAACAACATCATCTC 185 Query 211758 TGGTGCAGTTGTTCCATCTTCAAACGCAATCGGTTTACACTTCTATCCTATCTGGGAAGC 211817 |||||| |||||||| || || || || |||||| | |||||||| || || |||||||| Sbjct 186 TGGTGCGGTTGTTCCTTCCTCCAATGCGATCGGTCTGCACTTCTACCCCATTTGGGAAGC 245 Query 211818 AGCAACTCTTGATGAGTGGCTCTACAATGGTGGTCC 211853 ||| | | ||||| ||||||||||| ||||| || Sbjct 246 AGCCAGCTTGGATGAATGGCTCTACAACGGTGGCCC 281 >seq3172301 Length=157 Score = 127 bits (140), Expect = 3e-24 Identities = 121/155 (78%), Gaps = 0/155 (0%) Strand=Plus/Minus Query 211921 TCATACCGTTTAGGTATGCGTCCTTGGATCTGTGTTGCTTATTCAGCACCTGTATCAGCA 211980 || ||||| || || ||||||||||||||||| || ||||| |||||||| | || Sbjct 155 TCCTACCGCTTGGGAATGCGTCCTTGGATCTGCGTAGCTTACAGCGCACCTGTTGCGGCT 96 Query 211981 GCTTTCGCTGTATTCCTTGTTTACCCATTCGGTCAGGGTTCATTCTCAGACGGTATGCCT 212040 ||| || |||||| | | ||||| |||| || ||||| ||||| |||||||||||| Sbjct 95 GCTAGTGCAGTATTCTTGATCTACCCCATCGGACAAGGTTCTTTCTCCGACGGTATGCCT 36 Query 212041 TTAGGTATATCAGGAACATTCAACTTCATGTTCGT 212075 | ||||| || ||||| |||||||||||||| || Sbjct 35 CTGGGTATCTCCGGAACTTTCAACTTCATGTTGGT 1 >seq369660 Length=5115 Score = 114 bits (126), Expect = 2e-20 Identities = 178/252 (71%), Gaps = 2/252 (1%) Strand=Plus/Minus Query 193911 AATTATCGTGAGTCATATGGATTCCACGCTAGTTCTGGTATTCTCTTCAATCACGAATCT 193970 |||||||| || || || || || || || |||||| || || ||||| ||| | Sbjct 3613 AATTATCGGGAATCTTACGGTTTATTTGCCTGTAATGGTATCCTGTTTAATCATGAAAGT 3554 Query 193971 CCAAGAAGAGGTGAGACATTTGTAACTCGTAAGATTACACAAGGTTTATCTAAGATCTCT 194030 || | | ||| ||| ||||| || || || ||||| | | | || | | ||| | | Sbjct 3553 CCCCGCCGTGGTCCGACTTTTGTTACCCGCAAAATTACCCGCGCTGTAGCCAGGAT-TGT 3495 Query 194031 GTTGG-ATTACAGAAGATTCTTTATCTTGGTAATCTTAATGCTAAGAGGGATTGGGGACA 194089 | || | | |||||| |||||||| |||||||| |||| || |||| ||||| | Sbjct 3494 GAAGGGAATGCAGAAGGAACTTTATCTGGGTAATCTGGATGCAAAACGGGACTGGGGTTA 3435 Query 194090 CGCAAAGGATTATGTTGAAGCGATGTGGTTAATGTTGCAACAGGATGAACCCGATGATTA 194149 || ||||||||||| | |||||| | ||||||||||| ||| |||| |||||||| Sbjct 3434 TGCTAAGGATTATGTGCGGGGAATGTGGATGATGTTGCAACATGATCAACCGGATGATTA 3375 Query 194150 TGTGATTGCTAC 194161 |||| | || || Sbjct 3374 TGTGTTGGCAAC 3363 >seq3509123 Length=199 Score = 98.7 bits (108), Expect = 2e-15 Identities = 112/148 (76%), Gaps = 2/148 (1%) Strand=Plus/Plus Query 212413 AATGGATTCAACTTCAACCAATCAGTTGTTGA-TGCATCAGGTAAGGTTGTTCCTACTTG 212471 || || ||||||||||||||||| || | || | || | ||| ||| ||| || || Sbjct 1 AACGGTTTCAACTTCAACCAATCCGTAATGGACTCCAGC-GGTCGGGTAGTTAACACCTG 59 Query 212472 GGGTGATGTTCTTAACAGAGCAAACCTTGGTATGGAAGTTATGCACGAAAGAAATGCACA 212531 || |||||| | ||| | || ||||| ||||||||||| |||||||| | || || || Sbjct 60 GGCTGATGTCATCAACCGCGCTAACCTGGGTATGGAAGTAATGCACGAGCGCAACGCTCA 119 Query 212532 CAACTTCCCACTTGACTTAGCATCTGCT 212559 ||||||||| | || ||||| |||||| Sbjct 120 CAACTTCCCCTTAGATTTAGCTTCTGCT 147 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 767497615447920