Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ophionereis_20fasciata_20[genbank_20GCA_5F900067615.1_202017-02-27] 3,968,282 sequences; 1,184,528,790 total letters Query= NC_006998.1 Length=194711 Score E Sequences producing significant alignments: (Bits) Value seq760737 345 5e-90 seq456579 206 3e-48 seq817554 122 1e-22 seq3830724 113 5e-20 seq718041 102 1e-16 seq3953357 100 3e-16 seq780845 95.1 1e-14 seq3489149 93.3 5e-14 seq3878943 82.4 9e-11 seq805419 82.4 9e-11 >seq760737 Length=2966 Score = 345 bits (382), Expect = 5e-90 Identities = 613/892 (69%), Gaps = 9/892 (1%) Strand=Plus/Minus Query 32999 ACATAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCTT 33058 ||||||| || ||||||||| || || || | |||||| ||||| |||| ||| |||| Sbjct 1554 ACATAACCCCTGATTTTTGGTACTCGCCAACTCTTTTTTCAAAAAAGTTAGATTTCCCTT 1495 Query 33059 CCAATGATATATTTTCCATGAAATCAAACGGATTGGTAACATTATAAAtttttttAAATC 33118 | | ||| ||||| ||||| || |||||||| || || | | | | |||||| | | Sbjct 1494 CAATTGAAATATTATCCATAAAGTCAAACGGGTTTTTAGCGCGAAATAACTTTTTACAAC 1435 Query 33119 CCAATTCAGAAATCAATCTATCCGCGACGAATTCTATATATGTTTTCATCATTTCACAAT 33178 ||||||| || | | || || || ||||||||||| |||||| | || || Sbjct 1434 CCAATTCTACAAGAAGACGGTCTGCCACAAATTCTATATACTGTTTCATAAGATCTTTAT 1375 Query 33179 TCATTCCTATAAGTTTAACTGGAAGAGCCGCAGTAAGAAATTCTTGTTCAATGGATACCG 33238 ||||||| || | |||| || |||| || ||| |||| ||| || || | Sbjct 1374 TCATTCCAATCATTTTATTCGGGCATGCCGTTTCAAAAAAATCTTTTTCGATATCGACTG 1315 Query 33239 CATCTGTTATAATAGATCTAACGGTTTCTTCACTCGGTGGATGCAATAAA---TGTTTAA 33295 | || | ||| || | | |||| ||||| || ||| | | ||| Sbjct 1314 CGTCACCAACAATTTTGTAAATGATGGATTCATTCGGTTTTTGTTTTAAGCACTCTCTAA 1255 Query 33296 ACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAA 33355 ||| | || | |||||||| || | || ||||||||| ||||| |||||| |||| Sbjct 1254 ACACAAGGCAAGAAAAATCGCAATGTAAGCCTTCGTCTCTAGAAATTAATTCGTTTGAAA 1195 Query 33356 ACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCAG 33415 | |||||||| || | | || | |||||| ||||||||||| | ||||||||||||| Sbjct 1194 AAGTGAGTCCTGGAAGCAACCCTCTCTTTTTCAGCCAAAATATCGCAGCGAATGATCCAC 1135 Query 33416 AAAAGAAGATTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCCATAACCGGCGCTGT 33475 |||| || || |||||||| ||||| || || | |||||| || | | | | | Sbjct 1134 AAAAAAAAATGCCTTCTACACATGCAAAAGCGATTAACCTCTCTGCAAAT---GAGTTAT 1078 Query 33476 CATGT---ATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTA 33532 || | ||||| | ||||||||| ||||||||||| || ||||| | |||||| | Sbjct 1077 CAGATGCAATCCAAGCTAAAGCCCAATCAGCCTTCTTTTTAACGCAAGGTAACGTTTCGA 1018 Query 33533 TGGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGAC 33592 | || ||||| ||| | ||||||||| ||||| | |||||| || || || | | Sbjct 1017 TCGCGTTAAAAAGACACATTTTTTCATCTTCGTCTTTGATATAAGTTTCAATTAACAAGC 958 Query 33593 TATACATTTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCT 33652 |||||||||||| |||||| ||||| || || |||||||| || || || ||| | | Sbjct 957 TATACATTTCCGTATGAATATTTTCCATCGCAATCTGAAAGCCATAAAAGCATTTTATTT 898 Query 33653 CGGTAATCTGTACTTCTGTACAAAATCGTTCCGCCAAATTTTCATTCACTATTCCGTCAC 33712 | | ||| || ||||| | ||||||| | | | |||||| || || | ||| Sbjct 897 CTGCAATTTGAACTTCGGCTAAAAATCGCTGGACTATATTTTCTAATACAATGCAATCAG 838 Query 33713 TGGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCTGGTGTTAGTTTAT 33772 |||||| || || |||| | || || || ||||| |||| |||| || | Sbjct 837 CATTTGCAAAGAAAGCTAATATGTACTTGATGAATGTCTTTTCATCTGTAGTTAATTGGT 778 Query 33773 TCCAATCATTGATATCTTTAGATATATCTACTTCTTCCACTGTCCAAAATGATGCCTCTG 33832 ||| || | | ||| || | || ||| ||||| | |||||||||||||| |||| || Sbjct 777 ACCAGTCTTGTAAATCCTTTGTTAAATCAACTTCATTAACTGTCCAAAATGAAGCCTGTG 718 Query 33833 CCTTTTTATACATGTTCCAGATGTCATAATATTGGATTGGGAAAATAACAAA 33884 | ||||||||||| |||| | | || |||||| ||||| || | |||||| Sbjct 717 CTTTTTTATACATTGTCCAAAATTTATCATATTGTATTGGAAATAGAACAAA 666 >seq456579 Length=1737 Score = 206 bits (228), Expect = 3e-48 Identities = 406/598 (68%), Gaps = 7/598 (1%) Strand=Plus/Minus Query 33295 AACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAA 33354 |||| ||||| |||||||| ||||| | ||||||| | || || ||||||||||| Sbjct 1092 AACAATAAACAAGCGAAATCACAGTGTAACGCCTCGTCGCGGCTGATGAGTTCGTTGGAG 1033 Query 33355 AACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCA 33414 || || || |||||||| || || | || || | ||| ||||| | ||||| ||||| Sbjct 1032 AAGGTCAGACCGGGCATCAGACCCCTTTTCTTCAACCAGAATATCGCGGCGAACGATCCG 973 Query 33415 GAAAAGAAGATTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCCATAACCGGC---G 33471 |||||||| |||||||| || || || || | |||||| | || ||| Sbjct 972 GAAAAGAAAATTCCTTCGACGATGGCGAAAGCGACGAGTCTCGTGGCGAAAGAGGCTCGA 913 Query 33472 CTGTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCT 33531 || |||| ||||| | | ||||| ||||| |||||||| || || || ||||| Sbjct 912 CTATCATTGATCCATCTCAGGGCCCAGTCGGCTTTCTTTTTCACCGCGGGAATAGTTTCA 853 Query 33532 ATGGCATTAA--AGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAA 33589 || || || | | | || |||||| | | | ||| | | || ||||| || | || Sbjct 852 ATCGCTTTGAGCAAATATCGTTTTTCGCGTGA--ATCCTGGATGTAGGTATCTATGAGAA 795 Query 33590 GACTATACATTTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAG 33649 | | ||||||||||| || |||||||| || |||||||| ||||| || | | | Sbjct 794 GGCCGTACATTTCCGAGTGGATGTTTTCCATCATGATCTGAAACCCGTAAAAGAACCGCG 735 Query 33650 CCTCGGTAATCTGTACTTCTGTACAAAATCGTTCCGCCAAATTTTCATTCACTATTCCGT 33709 | || | |||||| ||||| ||||||| ||| ||||| |||||| || || |||| Sbjct 734 CTTCTGGAATCTGGACTTCCCTACAAAACCGTGTCGCCAGATTTTCGACAACGATCCCGT 675 Query 33710 CACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCTGGTGTTAGTT 33769 | || | || ||||| || | | || || |||||||| ||| | | || Sbjct 674 CGCTTCCCGCGAAAAAGGCGAGGATGTGGGAGATGAAATATTTCTCGCCGTCATTGAGAC 615 Query 33770 TATTCCAATCATTGATATCTTTAGATATATCTACTTCTTCCACTGTCCAAAATGATGCCT 33829 | | ||||| ||||||| | | ||| || || || |||||||| || |||| Sbjct 614 TTTCCCAATGGGGTTTATCTTTGGCGAGATCAACCTCAGCCGTCGTCCAAAAAGAAGCCT 555 Query 33830 CTGCCTTTTTATACATGTTCCAGATGTCATAATATTGGATTGGGAAAATAACAAATCT 33887 | || || ||||| ||||| | || | ||||| || |||||||| || ||||| Sbjct 554 CCGCTCGCTTGTACATTTTCCACACATCTTCGTATTGTATCGGGAAAATGACGAATCT 497 Score = 82.4 bits (90), Expect = 9e-11 Identities = 81/104 (78%), Gaps = 3/104 (3%) Strand=Plus/Minus Query 32989 TCTTCTTGAGAC---ATAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAA 33045 |||||| | ||| ||||| ||| | ||||||||||| || || | ||||||||| ||| Sbjct 1464 TCTTCTGGCGACGTCATAACGCCCGTCTTTTGGTATTCCCCTACTCTTTTTTCGAAGAAA 1405 Query 33046 TTAGTTTTTCCTTCCAATGATATATTTTCCATGAAATCAAACGG 33089 || | || ||||| | |||||||| ||||| |||||||| || Sbjct 1404 TTGCTCTTCCCTTCTAGGGATATATTCTCCATAAAATCAAAAGG 1361 >seq817554 Length=629 Score = 122 bits (134), Expect = 1e-22 Identities = 143/191 (75%), Gaps = 2/191 (1%) Strand=Plus/Plus Query 33695 CATTCACTATTCCGTCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTT 33754 |||| || || |||||||| || ||||| || ||||| |||||| ||||| | | | Sbjct 265 CATTGACGATACCGTCACTAGCAGCAAAGAAGGCCAACACATGTGAGATAAAGTGCCTCT 324 Query 33755 CGTCTGGTGTT-AGTTTATTCCAATCATTGATATCTTTAGATATATCTACTTCTTCCACT 33813 ||| || || || || | ||| | || || ||||| |||| ||| || |||||||| Sbjct 325 CGT-TGTCATTCAGCTTCTCCCAGTGGTTCATGTCTTTGGATAGATCAACCTCTTCCACC 383 Query 33814 GTCCAAAATGATGCCTCTGCCTTTTTATACATGTTCCAGATGTCATAATATTGGATTGGG 33873 ||||| ||||||||||||||||| || ||||| ||||||| || | ||||||| ||| Sbjct 384 GTCCAGAATGATGCCTCTGCCTTCTTGTACATCATCCAGATATCTTGGAATTGGATGGGG 443 Query 33874 AAAATAACAAA 33884 || | ||||| Sbjct 444 AAGACGACAAA 454 >seq3830724 Length=343 Score = 113 bits (124), Expect = 5e-20 Identities = 109/140 (78%), Gaps = 0/140 (0%) Strand=Plus/Plus Query 33295 AACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAA 33354 |||| |||||| || ||||| ||||||| || ||||| | ||| || |||||||||||| Sbjct 200 AACAGCAAACAGGCAAAATCACAGTGCAACCCTTCGTCGCGACTGATGAGTTCGTTGGAA 259 Query 33355 AACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCA 33414 ||||| | ||| ||||| | || || ||||| | ||| ||||||| ||||| || || Sbjct 260 AACGTCAATCCCGGCATCAATCCTCGTTTTTTCATCCACAATATGGCGGCGAAAGAACCC 319 Query 33415 GAAAAGAAGATTCCTTCTAC 33434 ||||| || | |||||||| Sbjct 320 GAAAAAAATACACCTTCTAC 339 >seq718041 Length=1499 Score = 102 bits (112), Expect = 1e-16 Identities = 152/212 (72%), Gaps = 8/212 (4%) Strand=Plus/Plus Query 63386 GTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTTGATATACCATT 63445 |||||| |||||||| || || || ||||||||||| || | || |||||| ||||||| Sbjct 391 GTATCTTGCGGTGTTGTTGTATACCCTCAACATTGGTATTAAGCCATTTGATGTACCATT 450 Query 63446 GGTACCGGAGATATAGCTTCCACTGGCACGAAT--ATTACTAATTGATAGACCTATTCCC 63503 ||| || | |||||||||||| || | ||| | | |||| || |||| ||| Sbjct 451 GGTGCCAGCAATATAGCTTCCAGATGCTCTAATGCAGTGAACATTG--AGGCCTACACCC 508 Query 63504 CCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTGTCATAGATACCCTCTATGCTA 63563 ||||| | || ||||| | ||||| | || | ||||| ||||| || ||||| || Sbjct 509 CCTGCTGTCTTTGAGATGAGGGCGCACTGCTTCAGTGTGTCGTAGATTCCTTCTATACTG 568 Query 63564 TCATCGAT--CATGTTAAGTAGAAAACAGCTA 63593 || ||| |||| | || || ||||| ||| Sbjct 569 TC--TGATGCCATGGTGAGCAGGAAACAACTA 598 >seq3953357 Length=757 Score = 100 bits (110), Expect = 3e-16 Identities = 114/153 (75%), Gaps = 0/153 (0%) Strand=Plus/Plus Query 33303 ACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAG 33362 ||| || || ||||||||||| || ||||| || || |||||||||| ||| |||| Sbjct 106 ACAAGCAAAGTCGCAGTGCAGTCCTTCGTCCCTGGAGATCAGTTCGTTGGCAAAGGTGAT 165 Query 33363 TCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCAGAAAAGAA 33422 || || | | || | |||||| | ||| || |||| || || |||||||| ||||| Sbjct 166 GCCCGGAAGGATCCCTCTCTTTTTGATCCAGAAGATGGCTGCAAAAGATCCAGAGAAGAA 225 Query 33423 GATTCCTTCTACTGCAGCAAAGGCAATAAGTCT 33455 ||| ||||| || || ||||| ||||| |||| Sbjct 226 GATCCCTTCCACGGCGGCAAATGCAATCTGTCT 258 >seq780845 Length=2927 Score = 95.1 bits (104), Expect = 1e-14 Identities = 102/134 (76%), Gaps = 1/134 (1%) Strand=Plus/Plus Query 63963 AGtttt-tttGTTTCCTTGTGTAGATTTGATACGGCTATTCTGGCGGCTAGAATGGCATA 64021 |||||| ||||||||||| || || || ||||| || || | ||| |||| ||| ||||| Sbjct 2453 AGTTTTCTTTGTTTCCTTATGGAGGTTGGATACTGCAATACGGGCTGCTAAAATTGCATA 2512 Query 64022 ATCCGGATGTTGTGTAGTACAAGTGGCTGCTATTTCGGCTGCCAGAGTGTCCAATTCTAC 64081 ||||||||| | || || || || || | || ||||| || ||||||||||| || Sbjct 2513 ATCCGGATGCTTCGTTGTCATGGTAGCAGCAGTCTCAGCTGCAAGTGTGTCCAATTCAAC 2572 Query 64082 CGTTGTTACTCCAT 64095 || || ||||||| Sbjct 2573 TGTGGTAACTCCAT 2586 >seq3489149 Length=195 Score = 93.3 bits (102), Expect = 5e-14 Identities = 131/184 (71%), Gaps = 0/184 (0%) Strand=Plus/Minus Query 33674 AAAATCGTTCCGCCAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAACGCCAATA 33733 |||| ||| ||| |||||||| |||||||||||||| | |||||||| || || | Sbjct 190 AAAACCGTGTCGCTAAATTTTCGCCAACTATTCCGTCACTAGTGGCAAAAAAGGCTAAAA 131 Query 33734 CATGTTTTATAAAATATTTTTCGTCTGGTGTTAGTTTATTCCAATCATTGATATCTTTAG 33793 || | | |||||| | || | || || ||||||| ||| ||||| || | Sbjct 130 TGTGCGTGAGGAAATATCTCTCACCCTCGGTGAGAGCGTTCCAATGATTTATATCCTTGG 71 Query 33794 ATATATCTACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACATGTTCCAGA 33853 | | ||||||||| |||| ||||||||||| ||||| || | || ||||| ||| | Sbjct 70 AAAGATCTACTTCGGCCACCGTCCAAAATGACGCCTCCTCCCTCTTGTACATTCGCCAAA 11 Query 33854 TGTC 33857 |||| Sbjct 10 TGTC 7 >seq3878943 Length=409 Score = 82.4 bits (90), Expect = 9e-11 Identities = 110/153 (72%), Gaps = 0/153 (0%) Strand=Plus/Minus Query 33303 ACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAG 33362 ||| || || |||||||||| ||||||||||| ||| || || ||| |||| | Sbjct 256 ACAGGCAAAGTCGCAGTGCATGCCCTCGTCTCTGGAAATAAGCTCATTGAAAAATAATAC 197 Query 33363 TCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCAGAAAAGAA 33422 || ||||| || || || || || ||||| | ||| | || | ||| |||||||| Sbjct 196 ACCTGGCATAAGACCGCGTTTCTTGAGCCAGACTATCGCCGCAAGGCTTCCGGAAAAGAA 137 Query 33423 GATTCCTTCTACTGCAGCAAAGGCAATAAGTCT 33455 || |||||||| | |||||||||| ||||| Sbjct 136 AATACCTTCTACGGGGGCAAAGGCAACCAGTCT 104 >seq805419 Length=1311 Score = 82.4 bits (90), Expect = 9e-11 Identities = 110/153 (72%), Gaps = 0/153 (0%) Strand=Plus/Plus Query 33303 ACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAG 33362 ||| || || ||||||||| || |||||||| || || ||||||||||| | || Sbjct 1079 ACAGGCAAAGCCGCAGTGCATGCCATCGTCTCTGGAGATGAGCTCGTTGGAAAAGGACAG 1138 Query 33363 TCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCAGAAAAGAA 33422 || |||| || || || || || ||||| ||||| | || || ||| ||||| || Sbjct 1139 ACCCGGCACGAGACCGCGTTTCTTGAGCCAGAATATCGCCGCAAAGCTTCCCGAAAAAAA 1198 Query 33423 GATTCCTTCTACTGCAGCAAAGGCAATAAGTCT 33455 ||| || || || || |||||||| | ||||| Sbjct 1199 GATGCCCTCGACAGCGGCAAAGGCCACCAGTCT 1231 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 592046822991120