Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ophionereis_20fasciata_20[genbank_20GCA_5F900067615.1_202017-02-27] 3,968,282 sequences; 1,184,528,790 total letters Query= NC_007383.1 Length=134394 Score E Sequences producing significant alignments: (Bits) Value seq668569 82.4 6e-11 >seq668569 Length=2433 Score = 82.4 bits (90), Expect = 6e-11 Identities = 100/134 (75%), Gaps = 8/134 (6%) Strand=Plus/Minus Query 104605 CGTTTTTCaaaaaaaTTAGTCTTGCCCTCCAGAGAAATATTATTCATAAATTCGAAAGGA 104664 ||||| || ||||| ||| ||||| | |||||||| ||||| | ||| || || |||||| Sbjct 142 CGTTTCTCGAAAAAGTTACTCTTGTCTTCCAGAGAGATATTCTCCATGAAATCAAAAGGA 83 Query 104665 TTC--AAAGTCTTAAAATATTTTTCGTAGC--CAAGCTCGATCAACAGTCGATCCGCCAC 104720 ||| || || ||| || || || | |||| || | ||| |||| ||||| || Sbjct 82 TTCTGAATGTGGTAA----TTCTTAGTGTCAACAAGTTCTAGCAAGAGTCTGTCCGCGAC 27 Query 104721 AAATTCGATGTACT 104734 |||||||||||||| Sbjct 26 AAATTCGATGTACT 13 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 409142817403710