Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ophionereis_20fasciata_20[genbank_20GCA_5F900067615.1_202017-02-27] 3,968,282 sequences; 1,184,528,790 total letters Query= NC_007805.1 Length=39199 Score E Sequences producing significant alignments: (Bits) Value seq982775 84.2 5e-12 >seq982775 Length=28252 Score = 84.2 bits (92), Expect = 5e-12 Identities = 296/457 (65%), Gaps = 4/457 (1%) Strand=Plus/Minus Query 719 GAATCCTCGTACAACGAGGGCAAGTGGAAGACGGCGCCATTTCAGGTCGCCATCCTGAAC 778 ||||| || || |||| || ||||| ||| || || || || || ||| | ||| Sbjct 2144 GAATCTTCATATCACGAAGGTCGTTGGAAAACGCTGCACTTCCAAGTGGCGATCTTAAAC 2085 Query 779 GCCATGGGTAACGACCTGATTCGGGTCGTAAACTTCGTGAAGTCGGCACGCATCGGCTAC 838 || ||||| || || || || || ||| | || |||||||| || | || ||| Sbjct 2084 GCAATGGGCTCGGATGCAATCCGAGTTGTGAACGTGGTCAAGTCGGCTCGACTTGGTTAC 2025 Query 839 ACGAAAATGCTGATGGCCAACATCGGCTACAAGATTCAGCACAAGCGCCGTAATGTGCTG 898 || || ||||| | || || | ||| | | |||||||||| || || || ||| Sbjct 2024 ACCAAGATGCTCCTCGCTGCTATTGCGTACTACGTAGAGCACAAGCGTCGGAACGTACTG 1965 Query 899 ATGTGGAGCCCGACTGACCCAGACGCCGAGGGGATCAGCAAGAGCCACGTTAATGGCCTG 958 || ||||| || | ||||| ||| | | || | |||||| || Sbjct 1964 TCGTTCTCGCCGACCGATACCGACGCTGAGAAGTTTTCAAAAACTCACGTTGATACAGCA 1905 Query 959 ATTCGCGATGTTCCGGTGCTGCTGGCGCTGGCCCCATGGTATGGCCGCAAGCATAGCGAC 1018 ||||| ||||||||| |||| || ||| ||||| |||| || ||||| | || Sbjct 1904 ATTCGTGATGTTCCGACGCTGAAGGAGCTTGCCCCTTGGTGCGGAATGAAGCACCGAGAT 1845 Query 1019 AACACGCTCGACACCAAGGTGTTTGCAAACCGGCGGACCCTT-TGGACGCTCGGCGGCAA 1077 |||||| | || ||| ||| | ||| ||| | || | | | |||||| || Sbjct 1844 AACACGTTAGATCAGAAGCGGTTCTCTAAC-GGCAAGCAATTATTCATACGCGGCGGTAA 1786 Query 1078 GGCTGCTCGCAACTACCGTGAGAGATCTGCCGACGAGGTGATCTATGACGAGCT-GTCGA 1136 ||| ||| | ||||||||||| | || || || | || | ||||||||||| | || Sbjct 1785 GGCGGCTAGGAACTACCGTGAAACGTCCGCTGATGTCGTCGTTTATGACGAGCTAGCCGC 1726 Query 1137 AGTTCGACGCCGATATTGAAGGTGAAGGTTCCCCAAC 1173 | ||||| ||||||||| ||||| || || || Sbjct 1725 A-TTCGATAAGGATATTGAAAAAGAAGGATCGCCGAC 1690 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 119409928126724