Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ophionereis_20fasciata_20[genbank_20GCA_5F900067615.1_202017-02-27] 3,968,282 sequences; 1,184,528,790 total letters Query= NC_007921.1 Length=147544 Score E Sequences producing significant alignments: (Bits) Value seq3695667 86.0 6e-12 seq805419 84.2 2e-11 >seq3695667 Length=253 Score = 86.0 bits (94), Expect = 6e-12 Identities = 95/127 (75%), Gaps = 0/127 (0%) Strand=Plus/Minus Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066 ||||||||| | | |||||| | ||| | || |||||||| || |||||||| ||| Sbjct 129 GCCACCGCGAAGCCTCAGCACCAGATGGAGCGTGGACTCCTTCTGGATGTTGTAGTCGGA 70 Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126 || ||||| ||||| ||||||||||| || |||| | | ||||||||| || || Sbjct 69 CAGTGTGCGGCCATCCTCCAGCTGCTTGCCGGCAAAGATCAGCCTCTGCTGGTCAGGGGG 10 Query 131127 GATTCCT 131133 ||| ||| Sbjct 9 GATGCCT 3 >seq805419 Length=1311 Score = 84.2 bits (92), Expect = 2e-11 Identities = 113/152 (74%), Gaps = 4/152 (3%) Strand=Plus/Minus Query 46160 TGGTGGCCTTTGCGATTGTGGAGGGCGTCtttttttCTGGCAGTTTTGCCGCCATCTTTT 46219 ||||||||||||| ||| |||||| |||||||||| || || ||||| || || || | Sbjct 1227 TGGTGGCCTTTGCCGCTGTCGAGGGCATCTTTTTTTCGGGAAGCTTTGCGGCGATATTCT 1168 Query 46220 ACATCAA-AACCAAGGGCATCATGCCCGGCCTGACGTTTAGCAACGAGCTGATATCGCGC 46278 |||| || | || | || |||| || ||| | ||| ||||||||| || || | Sbjct 1167 GGCTCAAGAAACGCGGTC-TCGTGCCGGGTCTGTCCTTTTCCAACGAGCTCATCTCCAGA 1109 Query 46279 GACGAGGGCCTGCA-TACGGACTTTGCGTGTC 46309 ||||| ||| |||| | ||| |||||| |||| Sbjct 1108 GACGATGGCATGCACTGCGG-CTTTGCCTGTC 1078 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448599301274880