Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ophionereis_20fasciata_20[genbank_20GCA_5F900067615.1_202017-02-27] 3,968,282 sequences; 1,184,528,790 total letters Query= NC_008291.1 Length=198050 Score E Sequences producing significant alignments: (Bits) Value seq760737 358 8e-94 seq456579 188 9e-43 seq817554 116 4e-21 seq718041 105 8e-18 seq3830724 100 3e-16 seq3489149 91.5 2e-13 seq3878943 87.8 2e-12 seq780845 86.0 8e-12 >seq760737 Length=2966 Score = 358 bits (396), Expect = 8e-94 Identities = 618/893 (69%), Gaps = 11/893 (1%) Strand=Plus/Minus Query 32356 ACATAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTACCTT 32415 ||||||| || ||||||||| || || || | |||||| ||||| |||| ||| |||| Sbjct 1554 ACATAACCCCTGATTTTTGGTACTCGCCAACTCTTTTTTCAAAAAAGTTAGATTTCCCTT 1495 Query 32416 CTAATGATATATTTTCCATGAAATCGAATGGATTGGTAACATTATAAAtttttttAAATC 32475 | | ||| ||||| ||||| || || || || || || | | | | |||||| | | Sbjct 1494 CAATTGAAATATTATCCATAAAGTCAAACGGGTTTTTAGCGCGAAATAACTTTTTACAAC 1435 Query 32476 CCAATTCAGAAATCAATCTATCTGCGACAAATTCTATATATGTTTTCATCATTTCACAAT 32535 ||||||| || | | ||||| |||||||||||||| |||||| | || || Sbjct 1434 CCAATTCTACAAGAAGACGGTCTGCCACAAATTCTATATACTGTTTCATAAGATCTTTAT 1375 Query 32536 TCATTCCTATAAGTTTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATAGAGACCG 32595 ||||||| || | |||| || ||| || ||| |||| ||| ||| ||| | Sbjct 1374 TCATTCCAATCATTTTATTCGGGCATGCCGTTTCAAAAAAATCTTTTTCGATATCGACTG 1315 Query 32596 CGTCTGTTATAATAGATCTTACTGTTTC-TTCACTCGGTG---GATACAATAAATGTTTA 32651 |||| | ||| | | | || | |||| ||||| | | || | | | || Sbjct 1314 CGTCACCAACAATTT-TGTAAATGATGGATTCATTCGGTTTTTGTTTTAAGCACTCTCTA 1256 Query 32652 AACATCAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAA 32711 |||| | || | |||||||| |||| || ||||||||| |||||||||||| ||| Sbjct 1255 AACACAAGGCAAGAAAAATCGCAATGTAAGCCTTCGTCTCTAGAAATTAATTCGTTTGAA 1196 Query 32712 AACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCA 32771 || |||||||| || | | || | |||||| ||||||||||| | || ||||||||| Sbjct 1195 AAAGTGAGTCCTGGAAGCAACCCTCTCTTTTTCAGCCAAAATATCGCAGCGAATGATCCA 1136 Query 32772 GAAAAGAAAATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCGGCGCTG 32831 |||| ||||| |||||||| ||||| || || | |||||| || | | | | Sbjct 1135 CAAAAAAAAATGCCTTCTACACATGCAAAAGCGATTAACCTCTCTGCAAAT---GAGTTA 1079 Query 32832 TCATGT---ATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCT 32888 ||| | ||||| | ||||||||| ||||||||||| || ||||| | || || Sbjct 1078 TCAGATGCAATCCAAGCTAAAGCCCAATCAGCCTTCTTTTTAACGCAAGGTAACGTTTCG 1019 Query 32889 ATAGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCAATCAAAAGA 32948 || || ||||| ||| | ||||||||| ||||| | ||| || ||||| || | Sbjct 1018 ATCGCGTTAAAAAGACACATTTTTTCATCTTCGTCTTTGATATAAGTTTCAATTAACAAG 959 Query 32949 CTATACATTTCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAGCATCTAGCC 33008 ||||||||||||| |||||| ||||| || || || ||||| || || |||||| | Sbjct 958 CTATACATTTCCGTATGAATATTTTCCATCGCAATCTGAAAGCCATAAAAGCATTTTATT 899 Query 33009 TCGGTAATCTGTACTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCA 33068 || | ||| || ||||| | ||||||| | ||| |||||| || || | ||| Sbjct 898 TCTGCAATTTGAACTTCGGCTAAAAATCGCTGGACTATATTTTCTAATACAATGCAATCA 839 Query 33069 CTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCTGGTGTTAGTTTA 33128 |||||| || || |||| | || || || ||||| |||| |||| || Sbjct 838 GCATTTGCAAAGAAAGCTAATATGTACTTGATGAATGTCTTTTCATCTGTAGTTAATTGG 779 Query 33129 TTCCAATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCT 33188 | ||| || | | ||| || | || ||| ||||| | |||||||||||||| |||| | Sbjct 778 TACCAGTCTTGTAAATCCTTTGTTAAATCAACTTCATTAACTGTCCAAAATGAAGCCTGT 719 Query 33189 GCCTTTTTATACATATTCCAGATGTCATGATATTGAATTGGAAAAATAACAAA 33241 || ||||||||||| |||| | | || |||||| |||||||| | |||||| Sbjct 718 GCTTTTTTATACATTGTCCAAAATTTATCATATTGTATTGGAAATAGAACAAA 666 >seq456579 Length=1737 Score = 188 bits (208), Expect = 9e-43 Identities = 402/598 (67%), Gaps = 7/598 (1%) Strand=Plus/Minus Query 32652 AACATCAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAA 32711 |||| ||||| |||||||| ||||||| ||||||| | || || | ||||||||| Sbjct 1092 AACAATAAACAAGCGAAATCACAGTGTAACGCCTCGTCGCGGCTGATGAGTTCGTTGGAG 1033 Query 32712 AACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCA 32771 || || || |||||||| || || | || || | ||| ||||| | || || ||||| Sbjct 1032 AAGGTCAGACCGGGCATCAGACCCCTTTTCTTCAACCAGAATATCGCGGCGAACGATCCG 973 Query 32772 GAAAAGAAAATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCGGC---G 32828 ||||||||||||||||| || || || || | |||||| | || ||| Sbjct 972 GAAAAGAAAATTCCTTCGACGATGGCGAAAGCGACGAGTCTCGTGGCGAAAGAGGCTCGA 913 Query 32829 CTGTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCT 32888 || |||| ||||| | | ||||| ||||| |||||||| || || || || || Sbjct 912 CTATCATTGATCCATCTCAGGGCCCAGTCGGCTTTCTTTTTCACCGCGGGAATAGTTTCA 853 Query 32889 ATAGCATTAA--AGAGATAGtttttttCATTACTATCTTTAACATATGTATCAATCAAAA 32946 || || || | | | || |||||| | | | ||| | | || ||||| || | || Sbjct 852 ATCGCTTTGAGCAAATATCGTTTTTCGCGTGA--ATCCTGGATGTAGGTATCTATGAGAA 795 Query 32947 GACTATACATTTCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAGCATCTAG 33006 | | ||||||||||| || |||||||| || || ||||| ||||| ||| | | | Sbjct 794 GGCCGTACATTTCCGAGTGGATGTTTTCCATCATGATCTGAAACCCGTAAAAGAACCGCG 735 Query 33007 CCTCGGTAATCTGTACTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGT 33066 | || | |||||| ||||| ||||||| ||| || | |||||| || || |||| Sbjct 734 CTTCTGGAATCTGGACTTCCCTACAAAACCGTGTCGCCAGATTTTCGACAACGATCCCGT 675 Query 33067 CACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCTGGTGTTAGTT 33126 | || | || ||||| || | | || || |||||||| ||| | | || Sbjct 674 CGCTTCCCGCGAAAAAGGCGAGGATGTGGGAGATGAAATATTTCTCGCCGTCATTGAGAC 615 Query 33127 TATTCCAATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCT 33186 | | ||||| ||||||| | | ||| || || || |||||||| || |||| Sbjct 614 TTTCCCAATGGGGTTTATCTTTGGCGAGATCAACCTCAGCCGTCGTCCAAAAAGAAGCCT 555 Query 33187 CTGCCTTTTTATACATATTCCAGATGTCATGATATTGAATTGGAAAAATAACAAATCT 33244 | || || ||||| ||||| | || | ||||| || || ||||| || ||||| Sbjct 554 CCGCTCGCTTGTACATTTTCCACACATCTTCGTATTGTATCGGGAAAATGACGAATCT 497 Score = 82.4 bits (90), Expect = 9e-11 Identities = 81/104 (78%), Gaps = 3/104 (3%) Strand=Plus/Minus Query 32346 TCTTCTTGAGAC---ATAACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAA 32402 |||||| | ||| ||||| ||| | ||||||||||| || || | ||||||||| ||| Sbjct 1464 TCTTCTGGCGACGTCATAACGCCCGTCTTTTGGTATTCCCCTACTCTTTTTTCGAAGAAA 1405 Query 32403 TTAGTTTTACCTTCTAATGATATATTTTCCATGAAATCGAATGG 32446 || | || ||||||| |||||||| ||||| ||||| || || Sbjct 1404 TTGCTCTTCCCTTCTAGGGATATATTCTCCATAAAATCAAAAGG 1361 >seq817554 Length=629 Score = 116 bits (128), Expect = 4e-21 Identities = 142/191 (74%), Gaps = 2/191 (1%) Strand=Plus/Plus Query 33052 CATTCACTATTCCGTCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTT 33111 |||| || || |||||||| || ||||| || ||||| |||||| ||||| | | | Sbjct 265 CATTGACGATACCGTCACTAGCAGCAAAGAAGGCCAACACATGTGAGATAAAGTGCCTCT 324 Query 33112 CGTCTGGTGTT-AGTTTATTCCAATCATTGATATCTTTAGATATATCCACTTCTTCCACT 33170 ||| || || || || | ||| | || || ||||| |||| ||| || |||||||| Sbjct 325 CGT-TGTCATTCAGCTTCTCCCAGTGGTTCATGTCTTTGGATAGATCAACCTCTTCCACC 383 Query 33171 GTCCAAAATGATGCCTCTGCCTTTTTATACATATTCCAGATGTCATGATATTGAATTGGA 33230 ||||| ||||||||||||||||| || ||||| ||||||| || || |||| || || Sbjct 384 GTCCAGAATGATGCCTCTGCCTTCTTGTACATCATCCAGATATCTTGGAATTGGATGGGG 443 Query 33231 AAAATAACAAA 33241 || | ||||| Sbjct 444 AAGACGACAAA 454 >seq718041 Length=1499 Score = 105 bits (116), Expect = 8e-18 Identities = 153/212 (72%), Gaps = 8/212 (4%) Strand=Plus/Plus Query 63241 GTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGTACCATT 63300 |||||| |||||||| || || || ||||||||||| || | ||||| ||||||||||| Sbjct 391 GTATCTTGCGGTGTTGTTGTATACCCTCAACATTGGTATTAAGCCATTTGATGTACCATT 450 Query 63301 GGTCCCTGAGATATAGCTTCCACTGGCACGAAT--ATTACTAATTGATAGACCTATTCCC 63358 ||| || | |||||||||||| || | ||| | | |||| || |||| ||| Sbjct 451 GGTGCCAGCAATATAGCTTCCAGATGCTCTAATGCAGTGAACATTG--AGGCCTACACCC 508 Query 63359 CCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTA 63418 ||||| | || ||||| | ||||| | || | || || ||||| || |||||||| Sbjct 509 CCTGCTGTCTTTGAGATGAGGGCGCACTGCTTCAGTGTGTCGTAGATTCCTTCTATACTG 568 Query 63419 TC--ATCCATCATGTTAAGTAGAAAACAGCTA 63448 || || | |||| | || || ||||| ||| Sbjct 569 TCTGATGC--CATGGTGAGCAGGAAACAACTA 598 >seq3830724 Length=343 Score = 100 bits (110), Expect = 3e-16 Identities = 106/140 (76%), Gaps = 0/140 (0%) Strand=Plus/Plus Query 32652 AACATCAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAA 32711 |||| |||||| || ||||| ||||| | || ||||| | ||| || | |||||||||| Sbjct 200 AACAGCAAACAGGCAAAATCACAGTGCAACCCTTCGTCGCGACTGATGAGTTCGTTGGAA 259 Query 32712 AACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCA 32771 ||||| | ||| ||||| | || || ||||| | ||| ||||||| || || || || Sbjct 260 AACGTCAATCCCGGCATCAATCCTCGTTTTTTCATCCACAATATGGCGGCGAAAGAACCC 319 Query 32772 GAAAAGAAAATTCCTTCTAC 32791 ||||| || | |||||||| Sbjct 320 GAAAAAAATACACCTTCTAC 339 >seq3489149 Length=195 Score = 91.5 bits (100), Expect = 2e-13 Identities = 134/190 (71%), Gaps = 0/190 (0%) Strand=Plus/Minus Query 33031 AAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAACGCCAATA 33090 |||| ||| ||||||||||| |||||||||||||| | |||||||| || || | Sbjct 190 AAAACCGTGTCGCTAAATTTTCGCCAACTATTCCGTCACTAGTGGCAAAAAAGGCTAAAA 131 Query 33091 CATGTTTTATAAAATATTTTTCGTCTGGTGTTAGTTTATTCCAATCATTGATATCTTTAG 33150 || | | |||||| | || | || || ||||||| ||| ||||| || | Sbjct 130 TGTGCGTGAGGAAATATCTCTCACCCTCGGTGAGAGCGTTCCAATGATTTATATCCTTGG 71 Query 33151 ATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACATATTCCAGA 33210 | | ||| ||||| |||| ||||||||||| ||||| || | || ||||| ||| | Sbjct 70 AAAGATCTACTTCGGCCACCGTCCAAAATGACGCCTCCTCCCTCTTGTACATTCGCCAAA 11 Query 33211 TGTCATGATA 33220 |||| |||| Sbjct 10 TGTCGGGATA 1 >seq3878943 Length=409 Score = 87.8 bits (96), Expect = 2e-12 Identities = 111/153 (73%), Gaps = 0/153 (0%) Strand=Plus/Minus Query 32660 ACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAG 32719 ||| || || |||||||| | ||||||||||| ||| | || ||| |||| | Sbjct 256 ACAGGCAAAGTCGCAGTGCATGCCCTCGTCTCTGGAAATAAGCTCATTGAAAAATAATAC 197 Query 32720 TCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAA 32779 || ||||| || || || || || ||||| | ||| | ||||| ||| |||||||| Sbjct 196 ACCTGGCATAAGACCGCGTTTCTTGAGCCAGACTATCGCCGCAAGGCTTCCGGAAAAGAA 137 Query 32780 AATTCCTTCTACTGCCGCAAAGGCAATAAGTCT 32812 ||| |||||||| | |||||||||| ||||| Sbjct 136 AATACCTTCTACGGGGGCAAAGGCAACCAGTCT 104 >seq780845 Length=2927 Score = 86.0 bits (94), Expect = 8e-12 Identities = 115/159 (72%), Gaps = 1/159 (1%) Strand=Plus/Plus Query 63818 AGtttt-tttGTTTCTTTGTGTAGATTTGATACGGCTATTCTAGCGGCTAGAATGGCATA 63876 |||||| |||||||| || || || || ||||| || || | || |||| ||| ||||| Sbjct 2453 AGTTTTCTTTGTTTCCTTATGGAGGTTGGATACTGCAATACGGGCTGCTAAAATTGCATA 2512 Query 63877 ATCCGGATGTTGTGTAGTACAAGTGGCTGCTATTTCGGCTGCCAGAGTGTCCAATTCTAC 63936 ||||||||| | || || || || || | || ||||| || ||||||||||| || Sbjct 2513 ATCCGGATGCTTCGTTGTCATGGTAGCAGCAGTCTCAGCTGCAAGTGTGTCCAATTCAAC 2572 Query 63937 CGTTGTTACACCATTATATATTCCTTGGATAACCTTCAT 63975 || || || |||| || || || ||| || ||||| Sbjct 2573 TGTGGTAACTCCATGGTAGATCCCGCTGATCACTTTCAT 2611 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 602201619247200