Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ophionereis_20fasciata_20[genbank_20GCA_5F900067615.1_202017-02-27] 3,968,282 sequences; 1,184,528,790 total letters Query= NC_008296.2 Length=177300 Score E Sequences producing significant alignments: (Bits) Value seq577692 475 4e-129 seq3816217 324 1e-83 seq856283 286 4e-72 seq3751544 224 1e-53 seq3654882 165 9e-36 seq3509123 143 3e-29 seq3172301 127 2e-24 seq2226574 113 5e-20 seq658184 109 6e-19 >seq577692 Length=2825 Score = 475 bits (526), Expect = 4e-129 Identities = 530/708 (75%), Gaps = 0/708 (0%) Strand=Plus/Plus Query 166044 TTGGGAATCCTTCTGCGAATGGGTTACCTCTACCAACAACCGTCTTTATGTTGGTTGGTT 166103 ||||||| || ||| ||||| || |||||||| ||||| |||||||| |||||||| Sbjct 164 TTGGGAACAGTTTTGCACTTGGGTAACATCTACCAATAACCGCCTTTATGTAGGTTGGTT 223 Query 166104 TGGCACACTGATGATTCCAACTCTGTTGGCAGCAACCATCTGTTTCATCGTCGCTTTCGT 166163 ||| | ||||||| || || || | | || ||||||||||| | | ||||| || Sbjct 224 TGGTATTGTGATGATCCCTACCTTGCTAACTGCCACCATCTGTTTTGTGTTAGCTTTTGT 283 Query 166164 AGCGGCACCTCCTGTCGATATCGATGGGATCCGTGAGCCCGTAGCAGGCTCTCTAATGTA 166223 ||| ||||||||||| ||||| || || ||||| || ||||| | || ||||| |||| Sbjct 284 AGCTGCACCTCCTGTGGATATTGACGGCATCCGCGAACCCGTTTCCGGTTCTCTGTTGTA 343 Query 166224 TGGTAACAACATCATCTCTGGTGCTGTTGTCCCCTCCTCCAACGCAATTGGTCTTCACTT 166283 || || ||||||||| | | |||||||| ||| || || || ||||| | ||||| Sbjct 344 CGGCAATAACATCATCACCGCCGCTGTTGTACCCAGTTCTAATGCGATTGGGTTGCACTT 403 Query 166284 CTATCCCATCTGGGAAGCAGCATCACTTGATGAATGGCTTTATAACGGTGGTCCTTTCCA 166343 ||||||||||||||||| ||| |||||||||||||||||||||| || || | ||| Sbjct 404 TTATCCCATCTGGGAAGCGGCAAATATTGATGAATGGCTTTATAACGGCGGCCCCTACCA 463 Query 166344 GCTCGTAGTCTTCCACTTCCTCATCGGCATCTATGCCTACATGGGTCGTGAATGGGAATT 166403 | | | || ||||||||||| |||||||| | | ||| ||||||||||| |||||| | Sbjct 464 GTTGATTGTTTTCCACTTCCTAATCGGCATTTTTTGCTATATGGGTCGTGAGTGGGAACT 523 Query 166404 GTCTTACCGCCTCGGTATGCGTCCTTGGATTTGCGTAGCATACTCTGCACCTGTTGCAGC 166463 |||||| || | || ||||||||||||||| || || || || ||||| || || Sbjct 524 GTCTTATCGGTTAGGAATGCGTCCTTGGATTGCTGTTGCTTATAGCGCTCCTGTAGCTGC 583 Query 166464 AGCATCCGCAGTCTTCCTGGTCTATCCTTTCGGTCAAGGTTCTTTCTCTGACGCAATGCC 166523 || | || || | | || ||| || |||||||||||||||| ||||| | | || Sbjct 584 TGCGACGGCGGTACTGTTAGTTTATTCTATCGGTCAAGGTTCTTTTTCTGATGGTTTACC 643 Query 166524 CCTGGGTATCAGTGGCACCTTCAACTACATGCTTGTCTTCCAAGCAGAGCACAACATCCT 166583 ||||| || |||||| || |||| ||| | || | ||||||||||| || | | Sbjct 644 GCTGGGGATTTCTGGCACATTTAACTTTATGTTAGTGCTGCAAGCAGAGCATAATGTTTT 703 Query 166584 CATGCACCCCTTCCATATGCTGGGTGTAGCAGGTGTATTCGGTGGGTCACTTTTCTCGGC 166643 ||||||||||||||||||||||| ||||| ||||| || ||||| | |||||||| || Sbjct 704 AATGCACCCCTTCCATATGCTGGGAGTAGCTGGTGTCTTTGGTGGCGCTCTTTTCTCAGC 763 Query 166644 AATGCACGGCAGTCTCGTTACTTCCTCGCTCGTCCGTGAGACCACTGAAACTGAGTCTCA 166703 |||||||| ||| || || || || | || ||||| |||||||||| ||| || Sbjct 764 TATGCACGGTTCTCTGGTGACATCTTCTTTAGTACGTGAAACCACTGAAATTGAAAGCCA 823 Query 166704 AAACTATGGTTACAAGTTTGGTCAAGAAGAAGAGACCTACAACATCGT 166751 |||| ||||| ||||| ||||||||||| || || ||||| || Sbjct 824 AAACCGGGGTTATCGCTTTGGACAAGAAGAAGAAACTTATAACATTGT 871 >seq3816217 Length=329 Score = 324 bits (358), Expect = 1e-83 Identities = 269/329 (82%), Gaps = 0/329 (0%) Strand=Plus/Plus Query 166561 TTCCAAGCAGAGCACAACATCCTCATGCACCCCTTCCATATGCTGGGTGTAGCAGGTGTA 166620 ||||||||||| ||||||||||| |||||||||||||||||| |||| || || |||||| Sbjct 1 TTCCAAGCAGAACACAACATCCTGATGCACCCCTTCCATATGTTGGGAGTTGCTGGTGTA 60 Query 166621 TTCGGTGGGTCACTTTTCTCGGCAATGCACGGCAGTCTCGTTACTTCCTCGCTCGTCCGT 166680 |||||||| | | ||||| || |||||||| | | || ||||| || | || ||| Sbjct 61 TTCGGTGGTGCTTTGTTCTCCGCGATGCACGGTTCTTTGGTAACTTCTTCCTTGGTGCGT 120 Query 166681 GAGACCACTGAAACTGAGTCTCAAAACTATGGTTACAAGTTTGGTCAAGAAGAAGAGACC 166740 || ||||| |||| || ||||||||||| |||||||| || |||||||||||||| ||| Sbjct 121 GAAACCACCGAAATCGAATCTCAAAACTACGGTTACAAATTCGGTCAAGAAGAAGAAACC 180 Query 166741 TACAACATCGTGGCTGCTCATGGTTACTTCGGTCGCCTGATCTTCCAATACGCTTCCTTC 166800 |||||||| ||||| ||||| ||||||||||||||||||||||||||||| ||||| ||| Sbjct 181 TACAACATTGTGGCAGCTCACGGTTACTTCGGTCGCCTGATCTTCCAATATGCTTCTTTC 240 Query 166801 AACAACTCTCGCTCGCTGCACTTCTTCCTCGCAGCATGGCCTGTTGTCGGTATCTGGTTT 166860 |||||| || || |||||||||||| | | || ||||| || |||| |||||||| Sbjct 241 AACAACAGCCGTTCCCTGCACTTCTTCTTGGGTGCTTGGCCGGTAATCGGCATCTGGTTC 300 Query 166861 ACTGCTCTTGGTGTTAGCACCATGGCATT 166889 || ||| | ||||| ||||||||| || Sbjct 301 ACCGCTTTAGGTGTATCCACCATGGCCTT 329 >seq856283 Length=1080 Score = 286 bits (316), Expect = 4e-72 Identities = 424/601 (71%), Gaps = 0/601 (0%) Strand=Plus/Minus Query 167298 GGTTTGATGTCCTGGATGACTGGCTTAAACGCGACCGCTTTGTCTTTGTGGGCTGGTCTG 167357 ||||||||||||| ||||||||||| || ||||| || || || |||||||| ||||| | Sbjct 1080 GGTTTGATGTCCTCGATGACTGGCTGAAGCGCGATCGGTTCGTATTTGTGGGATGGTCGG 1021 Query 167358 GATTACTTCTTTTTCCCACTGCTTATCTGGCAATTGGTGGCTGGCTTACTGGCACGACGT 167417 | | || ||||| ||| || ||||| | || || || ||| | || || || || | Sbjct 1020 GTATCCTGCTTTTCCCCTGCGCCTATCTATCTATCGGGGGATGGTTGACAGGAACCACCT 961 Query 167418 TTGTTACGAGCTGGTATACCCACGGGTTGGCGTCTAGTTACCTTGAGGGTGCTAATTTTC 167477 ||||||| ||||| |||||||| | || | ||||| || ||| || |||| Sbjct 960 TTGTTACCTCTTGGTACACCCACGGACTCGCCAGTTCCTACCTAGAAGGTTGCAACTTTC 901 Query 167478 TCACGGCAGCAGTGTCAACTCCTGCTGACGCTATGGGTCATTCTCTTCTTCTACTTTGGG 167537 | || || || || || || ||| || | |||| || || || || | || |||| Sbjct 900 TGACCGCTGCCGTCAGCACCCCCGCTAACAGTTTGGGGCACTCCCTACTGTTCCTGTGGG 841 Query 167538 GTCCTGAGTCTCAGGGGGATTTCATCAGGTGGTGCCAGCTTGGGGGACTCTGGGCTTTTG 167597 |||| || ||||| |||| || | | | |||||||| | ||||| | |||||||||| Sbjct 840 GTCCCGAAGCTCAGTGGGACTTTACCCGCTGGTGCCAATTAGGGGGTTTATGGGCTTTTG 781 Query 167598 TGGCGCTCCACGGAGCCTTTGCTCTCATAGGATTTATGCTTCGGCAATTTGAGATAAGTA 167657 | || || || ||||| || || || || || || || || || || || || Sbjct 780 TAGCCCTGCATGGAGCTTTCGCACTGATTGGGTTCTGCCTGCGTCAGTTGGAAATCGCCC 721 Query 167658 GACTAGTAGGTATCCGTCCTTACAATGCGATTGCTTTTTCTGGTCCGATTGCTGTCTTTG 167717 | | || || || |||||||| |||||||| ||||| | || || ||||| || || | Sbjct 720 GGTTGGTTGGCATTCGTCCTTATAATGCGATCGCTTTCACCGGCCCTATTGCCGTGTTCG 661 Query 167718 TGTCTGTTTTTCTCATCTATCCTCTCGGACAGTCCAGTTGGTTCTTTGCACCGTCGTTTG 167777 || || || | || || || | || || || | ||||||||||| || |||| Sbjct 660 TGAGCGTATTCTTAATGTACCCCTTGGGTCAATCTGGATGGTTCTTTGCTCCCAGCTTTG 601 Query 167778 GTGTTGCAGCGATATTTAGATTCCTACTATTCCTACAGGGTTTCCATAACTGGACGCTCA 167837 |||| |||| || || | || | |||||| | || || ||||| ||||||||||||| Sbjct 600 GTGTAGCAGGCATCTTCCGGTTTATCCTATTCTTCCAAGGATTCCACAACTGGACGCTCA 541 Query 167838 ACCCTTTCCATATGATGGGAGTTGCTGGTATCCTAGGCGGTGCATTGCTTTCTGCAATCC 167897 |||| ||||| |||||||||||||| || ||||| || ||||| | || | ||| || | Sbjct 540 ACCCCTTCCACATGATGGGAGTTGCCGGCATCCTGGGTGGTGCGCTACTCTGTGCTATTC 481 Query 167898 A 167898 | Sbjct 480 A 480 Score = 123 bits (136), Expect = 3e-23 Identities = 148/201 (74%), Gaps = 0/201 (0%) Strand=Plus/Minus Query 167926 TGAAGATGGTGAGCAAGCAAACACTTTCAAAGCATTTGATACGACTCAGGAAGAGGAAAC 167985 |||||| || || | | ||||| ||| || ||||| | || || | || ||||| Sbjct 420 TGAAGACGGAGAAGGATCTAACACCTTCCGTGCTTTTGAACCCACCCAAGCCGAAGAAAC 361 Query 167986 TTATTCCATGGTCACTGCTAACCGATTCTGGTCTCAAATTTTTGGTATTGCTTTCAGCAA 168045 || |||||||| || |||||||| |||||||| || ||||| ||||||||||| ||| Sbjct 360 CTACTCCATGGTGACAGCTAACCGCTTCTGGTCCCAGATTTTCGGTATTGCTTTTTCCAA 301 Query 168046 TAAGCGTTGGTTGCACTTCTTTATGCTTTTCGTTCCTGTCATGGGACTTTGGACAAGTTC 168105 || || ||||| |||||||| ||||| || |||||||| | || || |||| |||| Sbjct 300 CAAACGCTGGTTACACTTCTTCATGCTGTTTGTTCCTGTAACAGGGCTGTGGATGTGTTC 241 Query 168106 TATTGGTATCATCGGTCTCGC 168126 || ||| | | ||||| || Sbjct 240 CATCGGTGTAGTAGGTCTAGC 220 >seq3751544 Length=281 Score = 224 bits (248), Expect = 1e-53 Identities = 218/277 (79%), Gaps = 4/277 (1%) Strand=Plus/Plus Query 166063 TGGGTTACCTCTACCAACAACCGTCTTTATGTTGGTTGGTTTGGCACACTGATGATTCCA 166122 ||||| || || ||||||||||| |||||||| || ||||| || |||||||| || Sbjct 7 TGGGTAACATCCACCAACAACCGCCTTTATGTAGGCTGGTTCGGTGTTCTGATGATCCCT 66 Query 166123 ACTCTGTTGGCAGCAACCATCTGTTTCATCGTCGCTTTCGTAGCGGCACCTCCTGTCGAT 166182 || || | | || |||||||| | |||| ||||||| | || || || || || || Sbjct 67 ACCCTACTAACTGCTACCATCTGCTACATCATCGCTTTTATCGCTGCTCCCCCCGTGGAC 126 Query 166183 ATCGATGGGATCCGTGAGCCCGTAGCAGGCTCTCTAATGTATGGTAACAACATCATCTCT 166242 || || || ||||| || |||||||| || ||||| |||| || ||||||||||||||| Sbjct 127 ATTGACGGTATCCGCGAACCCGTAGCTGGTTCTCTGTTGTACGGCAACAACATCATCTCT 186 Query 166243 GGTGCTGTTGTCCCCTCCTCCAACGCAATTGGTCTTCACTTCTATCCCATCTGGGAAGCA 166302 ||||| ||||| || |||||||| || || ||||| |||||||| ||||| ||||||||| Sbjct 187 GGTGCGGTTGTTCCTTCCTCCAATGCGATCGGTCTGCACTTCTACCCCATTTGGGAAGCA 246 Query 166303 GCATCA-CTT-GATGAATGGCTTTATAACGGTGGTCC 166337 || || ||| ||||||||||| || |||||||| || Sbjct 247 GC--CAGCTTGGATGAATGGCTCTACAACGGTGGCCC 281 >seq3654882 Length=237 Score = 165 bits (182), Expect = 9e-36 Identities = 177/234 (76%), Gaps = 0/234 (0%) Strand=Plus/Minus Query 167926 TGAAGATGGTGAGCAAGCAAACACTTTCAAAGCATTTGATACGACTCAGGAAGAGGAAAC 167985 |||||| || || | | ||||| ||| ||| ||||| |||| || | || ||||| Sbjct 236 TGAAGACGGAGAAGGATCTAACACCTTCCGAGCCTTTGAACCGACCCAAGCGGAAGAAAC 177 Query 167986 TTATTCCATGGTCACTGCTAACCGATTCTGGTCTCAAATTTTTGGTATTGCTTTCAGCAA 168045 ||||||||||| || || ||||| || |||||||||||||| ||||||||||| || Sbjct 176 CTATTCCATGGTGACAGCCAACCGCTTTTGGTCTCAAATTTTCGGTATTGCTTTTTCAAA 117 Query 168046 TAAGCGTTGGTTGCACTTCTTTATGCTTTTCGTTCCTGTCATGGGACTTTGGACAAGTTC 168105 || |||||||| |||||||| ||||| |||||||| || | || || |||| |||| Sbjct 116 CAAACGTTGGTTACACTTCTTCATGCTGTTCGTTCCCGTAACAGGTCTGTGGATGTGTTC 57 Query 168106 TATTGGTATCATCGGTCTCGCACTTAATCTTCGTGCTTATGACTTTGTGTCTCA 168159 || ||| | | ||||| || | || || |||||||||||||| ||||| || Sbjct 56 CATCGGTGTAGTGGGTCTAGCTGTAAACCTGCGTGCTTATGACTTCGTGTCACA 3 >seq3509123 Length=199 Score = 143 bits (158), Expect = 3e-29 Identities = 145/186 (78%), Gaps = 2/186 (1%) Strand=Plus/Plus Query 166897 AACGGTTTCAACTTCAACCAGTCCATCATCGATGGTCAG-GGTCGTGTGCTCAACACTTG 166955 |||||||||||||||||||| ||| | || || ||| ||||| || | ||||| || Sbjct 1 AACGGTTTCAACTTCAACCAATCCGTAATGGA-CTCCAGCGGTCGGGTAGTTAACACCTG 59 Query 166956 GGCAGATGTCCTCAACCGTGCTGGTCTGGGTATGGAAGTAATGCACGAGCGTAATGCTCA 167015 ||| |||||| ||||||| ||| |||||||||||||||||||||||||| || ||||| Sbjct 60 GGCTGATGTCATCAACCGCGCTAACCTGGGTATGGAAGTAATGCACGAGCGCAACGCTCA 119 Query 167016 CAACTTCCCTCTGGATCTTGCTGCTGCTGAGTCCACTCCTGTGGCACTCACCGCACCTGC 167075 ||||||||| | ||| | ||| |||||||||| ||||| || | |||||| Sbjct 120 CAACTTCCCCTTAGATTTAGCTTCTGCTGAGTCTGAGCCTGTAGCTTTGGTTGCACCTCA 179 Query 167076 AATCGG 167081 |||||| Sbjct 180 AATCGG 185 >seq3172301 Length=157 Score = 127 bits (140), Expect = 2e-24 Identities = 118/150 (79%), Gaps = 0/150 (0%) Strand=Plus/Minus Query 166405 TCTTACCGCCTCGGTATGCGTCCTTGGATTTGCGTAGCATACTCTGCACCTGTTGCAGCA 166464 || |||||| | || |||||||||||||| |||||||| ||| ||||||||||| || Sbjct 155 TCCTACCGCTTGGGAATGCGTCCTTGGATCTGCGTAGCTTACAGCGCACCTGTTGCGGCT 96 Query 166465 GCATCCGCAGTCTTCCTGGTCTATCCTTTCGGTCAAGGTTCTTTCTCTGACGCAATGCCC 166524 || ||||| ||| || |||| || |||| |||||||||||||| |||| ||||| Sbjct 95 GCTAGTGCAGTATTCTTGATCTACCCCATCGGACAAGGTTCTTTCTCCGACGGTATGCCT 36 Query 166525 CTGGGTATCAGTGGCACCTTCAACTACATG 166554 ||||||||| || || ||||||| |||| Sbjct 35 CTGGGTATCTCCGGAACTTTCAACTTCATG 6 >seq2226574 Length=116 Score = 113 bits (124), Expect = 5e-20 Identities = 94/115 (82%), Gaps = 0/115 (0%) Strand=Plus/Plus Query 167816 GGTTTCCATAACTGGACGCTCAACCCTTTCCATATGATGGGAGTTGCTGGTATCCTAGGC 167875 || ||||| |||||||| || ||||| ||||| |||||||||||||| || ||||| ||| Sbjct 2 GGATTCCACAACTGGACTCTAAACCCCTTCCACATGATGGGAGTTGCGGGAATCCTCGGC 61 Query 167876 GGTGCATTGCTTTCTGCAATCCATGGTGTTACAGTAGAGAATACTCTGTATGAAG 167930 ||||| | || | ||| || ||||||| ||||||||| || || |||| ||||| Sbjct 62 GGTGCGCTACTATGTGCTATTCATGGTGCTACAGTAGAAAACACCCTGTTTGAAG 116 >seq658184 Length=760 Score = 109 bits (120), Expect = 6e-19 Identities = 111/145 (77%), Gaps = 0/145 (0%) Strand=Plus/Minus Query 167298 GGTTTGATGTCCTGGATGACTGGCTTAAACGCGACCGCTTTGTCTTTGTGGGCTGGTCTG 167357 ||||||||||||| ||||||||||| || || || |||||||| || || || ||||||| Sbjct 162 GGTTTGATGTCCTCGATGACTGGCTGAAGCGTGATCGCTTTGTATTCGTAGGATGGTCTG 103 Query 167358 GATTACTTCTTTTTCCCACTGCTTATCTGGCAATTGGTGGCTGGCTTACTGGCACGACGT 167417 | | || ||||| ||| ||| ||||| | || || || ||||| || || || || | Sbjct 102 GTATCCTGCTTTTCCCCTGTGCCTATCTATCTATCGGCGGATGGCTCACCGGAACTACCT 43 Query 167418 TTGTTACGAGCTGGTATACCCACGG 167442 ||||||| ||||| || ||||| Sbjct 42 TTGTTACCTCTTGGTACACTCACGG 18 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 539095293307200