Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ophionereis_20fasciata_20[genbank_20GCA_5F900067615.1_202017-02-27] 3,968,282 sequences; 1,184,528,790 total letters Query= NC_008724.1 Length=288047 Score E Sequences producing significant alignments: (Bits) Value seq3242335 104 4e-17 seq3695667 96.9 6e-15 seq3113445 84.2 4e-11 seq650275 84.2 4e-11 >seq3242335 Length=163 Score = 104 bits (114), Expect = 4e-17 Identities = 123/164 (75%), Gaps = 2/164 (1%) Strand=Plus/Plus Query 68280 ATGTTATAATCGGAGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGT-CT 68338 ||||| || || ||||| || | ||||| | |||||||| || || || || ||| | Sbjct 1 ATGTTGTAGTCTGAGAGAGTGCGGCCATCCTGCAACTGCTTGCCAGCAAAGAT-AGTACG 59 Query 68339 TTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGT 68398 | ||||| ||||||||||| |||||| |||||||||| | || || |||||||| | Sbjct 60 CAGCTGGTCTGGTGGAATGCCCTCCTTGGCTTGAATCTTGGTTTTCACATCCTCGATGCT 119 Query 68399 GTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGG 68442 ||| || ||| || || | |||||||||||| || || |||| Sbjct 120 GTCACTTGGTTCCACCTCTAGGGTGATGGTTTTGCCAGTCAGGG 163 >seq3695667 Length=253 Score = 96.9 bits (106), Expect = 6e-15 Identities = 97/126 (77%), Gaps = 0/126 (0%) Strand=Plus/Minus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || |||||||| | || |||| || ||||||||||| || |||||||| || ||||| Sbjct 128 CCACCGCGAAGCCTCAGCACCAGATGGAGCGTGGACTCCTTCTGGATGTTGTAGTCGGAC 69 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 ||||| | ||||| || | |||||| ||||| || || || || || ||||| || || Sbjct 68 AGTGTGCGGCCATCCTCCAGCTGCTTGCCGGCAAAGATCAGCCTCTGCTGGTCAGGGGGG 9 Query 68355 ATGCCT 68360 |||||| Sbjct 8 ATGCCT 3 >seq3113445 Length=152 Score = 84.2 bits (92), Expect = 4e-11 Identities = 109/151 (72%), Gaps = 0/151 (0%) Strand=Plus/Plus Query 68270 CTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAA 68329 |||||| || ||||| || || ||||| || ||||| || |||||||| || || || Sbjct 1 CTCTTTCTGAATGTTGTAGTCTGAGAGAGTGTGGCCATCCTCCAACTGCTTGCCAGCAAA 60 Query 68330 TATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGC 68389 | || | || ||||| |||||||| || ||| ||||||||||| | ||||| || Sbjct 61 GGTAAGACGCTGCTGGTCTGGTGGAATACCCTCCCTGTCTTGAATCATGGCCTTCACATT 120 Query 68390 CTCGATGGTGTCTGCTGATTCTACTTCCAAG 68420 |||| ||| || || ||| || || ||| Sbjct 121 GTCGACGGTTTCGCTTGGTTCAACCTCTAAG 151 >seq650275 Length=2042 Score = 84.2 bits (92), Expect = 4e-11 Identities = 136/193 (70%), Gaps = 2/193 (1%) Strand=Plus/Plus Query 68274 TTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCTAACTGCT-TCCCGGCGAATAT 68332 || || |||||||| || ||||| || | ||||||| ||| || | | || | || || Sbjct 1230 TTCTGAATGTTATATTCTGAGAGAGTGCAGCCATCTT-TAAGTGATCTACCATCAAAGAT 1288 Query 68333 GAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTC 68392 || || |||| |||| |||||||||| ||||||||||||| || | || || Sbjct 1289 AAGAAGCTGCAGGTCTGGTGAAATGCCTTCCATGTCTTGAATCTTGGCTTGCACATTTTC 1348 Query 68393 GATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAA 68452 ||||||||| || ||| || | |||||||| || | || |||| |||||||| Sbjct 1349 GATGGTGTCACTTGGTTCAACCTGTAAGGTGATCCTTGCGCTAGTCTGGGTTTTGACGAA 1408 Query 68453 TATCTGCATTATG 68465 || | |||| || Sbjct 1409 GATTTTCATTTTG 1421 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 875906680241040