Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ophionereis_20fasciata_20[genbank_20GCA_5F900067615.1_202017-02-27] 3,968,282 sequences; 1,184,528,790 total letters Query= NC_009990.1 Length=37313 Score E Sequences producing significant alignments: (Bits) Value seq981730 199 9e-47 >seq981730 Length=45146 Score = 199 bits (220), Expect = 9e-47 Identities = 177/218 (81%), Gaps = 5/218 (2%) Strand=Plus/Plus Query 36055 CTATAATTTGTTTGCGCCTAGGTTTAGCGGCTGAACGTGGACTT--ATCACCCACTGGCG 36112 ||||| ||| |||||||||||||||||||||||| |||||| | |||||||||||||| Sbjct 14512 CTATAGTTTAATTGCGCCTAGGTTTAGCGGCTGAAAGTGGACCTCAATCACCCACTGGCG 14571 Query 36113 CAACAATTCA-GATAAATAACCTAACTGATAAAGAGGTTGCCATGAAAGAGCAAAATTTT 36171 |||||||||| ||| |||||||| |||| |||||| | |||| | |||||| |||| Sbjct 14572 CAACAATTCAAGATTGATAACCTA--TGATTGCGAGGTTCCTATGAGAAAGCAAAGTTTT 14629 Query 36172 AACTGTAAAGTTGATGGTTGTGACCGTAAAGCACAATACAAGAAACAAGGTGTTTGCCAA 36231 || || |||||||| ||||| | | | | || ||||| || ||| || | || || ||| Sbjct 14630 AAATGCAAAGTTGACGGTTGCGGCAGAAGCGCCCAATATAAAAAAGAAAGAGTATGTCAA 14689 Query 36232 AAACATTATTTTAGAATGATGCGTTCCGGAACTTACGA 36269 ||||||||||| ||||||||||| | ||| |||||||| Sbjct 14690 AAACATTATTTCAGAATGATGCGGTACGGGACTTACGA 14727 Score = 156 bits (172), Expect = 1e-33 Identities = 231/325 (71%), Gaps = 2/325 (1%) Strand=Plus/Plus Query 34293 ACTTGAAAAGCTAAACAAGTTTAAAACTGGTGGTCAGTATTCAGTTGAAATTAAGCTTGC 34352 ||||||| || ||| |||||||||||| | | || || |||||||||| | Sbjct 13435 ACTTGAAGAGTTAACCAAGTTTAAAACAAGCGAGGTTTACGAGGTAGAAATTAAGCGCGT 13494 Query 34353 GCGTAACCCGGCTTTTCACCGTAAAGTTTTTGCGTTCTTCAACTTCTGTTTTGAGTATTG 34412 | ||||| |||||||| || || ||| |||| ||| | || |||||| | |||| Sbjct 13495 AAGAAACCCAAACTTTCACCGCAAGGTATTTTCGTTTTTCCAGTTTTGTTTTTGGCATTG 13554 Query 34413 GAAAGGTGACAACGAGTTTCAAAGCGAGTCTAAGCAGTTTGACATATTCAGACAGCATTT 34472 ||| || || |||||||||||| || | || |||||||| || |||||| ||||||| Sbjct 13555 GAAGGGGGATAACGAGTTTCAATCAGAAGCCAAACAGTTTGATATGTTCAGAAAGCATTT 13614 Query 34473 AACTTGCTTGGCTGGCTTCTATGATCAGTTTGCCAACATTAACGGCGAAGTAAGAATTGA 34532 |||| ||| || || || | || ||| || || | ||| ||||| |||| Sbjct 13615 AACTGTCTTAGCGGGATTTCACGAGTCTTTTTATAAAATAGATGGCTCGGTAAGGGTTGA 13674 Query 34533 AGCTAAATCGCTGGCCTTTTCTTCAATGAGTCAGGAAGAATTTGAAGAGTGTTACAACGC 34592 ||||||| || | ||| || ||||||||| |||||||||||| || ||| |||| Sbjct 13675 AGCTAAAAGTCTTTCATTTGGCTCCATGAGTCAGTCAGAATTTGAAGAATGCTACCACGC 13734 Query 34593 TTTGAT-CAGAGCAGCGTTAAAACA 34616 || || ||| ||||||||||| || Sbjct 13735 ATTAATACAG-GCAGCGTTAAAGCA 13758 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 113659126961100