Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ophionereis_20fasciata_20[genbank_20GCA_5F900067615.1_202017-02-27] 3,968,282 sequences; 1,184,528,790 total letters Query= NC_011616.1 Length=148634 Score E Sequences producing significant alignments: (Bits) Value seq805419 89.7 5e-13 >seq805419 Length=1311 Score = 89.7 bits (98), Expect = 5e-13 Identities = 102/136 (75%), Gaps = 6/136 (4%) Strand=Plus/Minus Query 47160 GTCGAGGGCGTCTTCTTCTCGGGCAGCTTTGCGGCGATATTTTA---CATGAAAACCAAA 47216 ||||||||| |||| || ||||| ||||||||||||||||| | || |||| | Sbjct 1210 GTCGAGGGCATCTTTTTTTCGGGAAGCTTTGCGGCGATATTCTGGCTCAAGAAACGC--- 1154 Query 47217 GGAGTTATGCCCGGCCTCACGTTTAGCAACGAGCTAATCTCGAGAGACGAAGGCCTGCAC 47276 || | |||| || || | ||| ||||||||| ||||| |||||||| ||| ||||| Sbjct 1153 GGTCTCGTGCCGGGTCTGTCCTTTTCCAACGAGCTCATCTCCAGAGACGATGGCATGCAC 1094 Query 47277 ACCAACTTTGCCTGTC 47292 | ||||||||||| Sbjct 1093 TGCGGCTTTGCCTGTC 1078 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 451914284179680