Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ophionereis_20fasciata_20[genbank_20GCA_5F900067615.1_202017-02-27] 3,968,282 sequences; 1,184,528,790 total letters Query= NC_013668.3 Length=248526 Score E Sequences producing significant alignments: (Bits) Value seq3953357 114 2e-20 >seq3953357 Length=757 Score = 114 bits (126), Expect = 2e-20 Identities = 111/143 (78%), Gaps = 0/143 (0%) Strand=Plus/Plus Query 159923 CACGCAAAGTCGCAGTGCAGTCCCTCGTCCCGAGAGATGAACTCGTTGGACATGATGAGG 159982 || |||||||||||||||||||| ||||||| ||||| | ||||||| | | ||| | Sbjct 107 CAAGCAAAGTCGCAGTGCAGTCCTTCGTCCCTGGAGATCAGTTCGTTGGCAAAGGTGATG 166 Query 159983 CCCGGCATGATCCCACGCGGTTTGAGCCAAAAAATGGCCGCAAAAGCACCGCTAAAAAAG 160042 ||||| | |||||| | | ||||| ||| || ||||| ||||||| || || ||| Sbjct 167 CCCGGAAGGATCCCTCTCTTTTTGATCCAGAAGATGGCTGCAAAAGATCCAGAGAAGAAG 226 Query 160043 ATCCCCTCCACGGCCGCAAACGC 160065 ||||| |||||||| ||||| || Sbjct 227 ATCCCTTCCACGGCGGCAAATGC 249 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 755712699157920