Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ophionereis_20fasciata_20[genbank_20GCA_5F900067615.1_202017-02-27] 3,968,282 sequences; 1,184,528,790 total letters Query= NC_014637.1 Length=617453 Score E Sequences producing significant alignments: (Bits) Value seq585211 93.3 2e-13 seq3835962 87.8 7e-12 >seq585211 Length=2034 Score = 93.3 bits (102), Expect = 2e-13 Identities = 110/149 (74%), Gaps = 0/149 (0%) Strand=Plus/Plus Query 451268 CTTACTAAAATGAAAGAAACAGCAGAACAATATATTGGTTCTCCAGTTACTGATGCAGTA 451327 || || || |||||||||||||| ||| |||| |||| ||| | |||| || Sbjct 1047 CTGACCAAGATGAAAGAAACAGCTGAAGCATATCTTGGAGGAAAAGTCAGAGATGTGGTC 1106 Query 451328 ATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGATGCAGGACAT 451387 || || || || || || |||||||| |||| ||||| || || |||||||||||| | Sbjct 1107 ATCACAGTGCCAGCATACTTCAATGACTCACAGCGGCAGGCCACCAAAGATGCAGGAGTT 1166 Query 451388 ATTGCTGGTTTAAATGTTCTTCGAATTAT 451416 || ||||| ||||||| || ||||| || Sbjct 1167 ATCGCTGGACTAAATGTGCTACGAATCAT 1195 >seq3835962 Length=349 Score = 87.8 bits (96), Expect = 7e-12 Identities = 174/254 (69%), Gaps = 8/254 (3%) Strand=Plus/Plus Query 451991 AATCCTGATGAAGCTGTTGCATATGGTGCTGCAGTTCAAGCAGCTATTCTAACAGGTTCA 452050 ||||||||||| ||||| || || || || ||||| |||||||| |||||| | || | Sbjct 100 AATCCTGATGAGGCTGTAGCGTACGGAGCGGCAGTCCAAGCAGCGATTCTATCTGG---A 156 Query 452051 GATGA---TGAAAAATTAGGAGATATTCTGTTAGTAGATGTAACACCTCTATCTCTTGGA 452107 ||||| || || | |||| | || | || ||||| |||| || || || || Sbjct 157 GATGATAGTGCTGAAGTGAAAGATGTGTTGCTTGTGGATGTTGCACCACTGTCACTCGGT 216 Query 452108 GTTGAAACAGCTGGTGGAATGATGACTAATTTAATTAAACGAGGAACTTCTATTCCTTGT 452167 |||||||||||||||| | ||||| ||| | || |||| ||| |||||| | Sbjct 217 ATTGAAACAGCTGGTGGCGTCATGACAAATCTCATCGAACGTAACACTCGTATTCCCAAT 276 Query 452168 AAAAAGAGTCAAACATTTAGTACAGCAAG-TGATAACCAACCAGGTGTAACTATTCAAGT 452226 || | || | ||| | ||| | | | ||| |||||| || || | || || || Sbjct 277 AAGACTGGTAAGGAATTCACTAC-GTACGCTGACAACCAATCAATGGTCAGCATCCAGGT 335 Query 452227 GTTTGAAGGAGAAC 452240 |||||||| |||| Sbjct 336 ATTTGAAGGTGAAC 349 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1875265738026456