Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ophionereis_20fasciata_20[genbank_20GCA_5F900067615.1_202017-02-27] 3,968,282 sequences; 1,184,528,790 total letters Query= NC_014649.1 Length=1181549 Score E Sequences producing significant alignments: (Bits) Value seq3578837 105 5e-17 seq358313 104 2e-16 seq215353 104 2e-16 seq1725518 102 6e-16 seq1902441 95.1 9e-14 seq823764 86.0 4e-11 >seq3578837 Length=214 Score = 105 bits (116), Expect = 5e-17 Identities = 118/158 (75%), Gaps = 0/158 (0%) Strand=Plus/Minus Query 518546 ATTGCAGCTTGATATTTGGCTGCATCTCCAATCAGATGTTCTGTCTCTGTAAATGAAACA 518605 ||||| |||| | | ||||| ||||| ||||| ||| || || |||||| |||| Sbjct 160 ATTGCCACTTGGTTCATCGCTGCCTCTCCGATCAGTCTTTCAGTGTCGTTAAATGCAACA 101 Query 518606 TATGATGGAGTTGTGCGATTACCTTGATCATTCGCAATAATTTCAACTTTACCATTTTGC 518665 || ||| ||||| | ||| |||||||| || ||||||||||||||||| ||||| || Sbjct 100 TAACTTGGTGTTGTTCTATTTCCTTGATCGTTAGCAATAATTTCAACTTTGCCATTCTGG 41 Query 518666 CATACACCTACACAACTAAAAGTTGTTCCTAAATCAAT 518703 | || || ||||| | | |||||||| ||||| || Sbjct 40 AACACTCCCACACAGGAATAGGTTGTTCCCAAATCGAT 3 >seq358313 Length=1722 Score = 104 bits (114), Expect = 2e-16 Identities = 96/122 (79%), Gaps = 0/122 (0%) Strand=Plus/Minus Query 518201 GGTTCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCT 518260 |||||||| |||||||||| ||| | ||||||||||| | || |||||||| || ||| Sbjct 1234 GGTTCATTGATAATTCTCATGACAGTCAGACCAGCAATGGTCCCGGCATCTTTGGTCGCT 1175 Query 518261 TGTCTTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCAGTTACTTCTTTA 518320 |||||| | |||||| ||||| ||||||||||| | ||||| | || || | |||| Sbjct 1174 CTTCTTTGGGCATCGTTGAAATAGGCAGGAACAGTGACGACGGCGTGTGTGACCTTTTTA 1115 Query 518321 CC 518322 || Sbjct 1114 CC 1113 >seq215353 Length=926 Score = 104 bits (114), Expect = 2e-16 Identities = 123/164 (75%), Gaps = 2/164 (1%) Strand=Plus/Plus Query 518546 ATTGCAGCTTGATATTTGGCTGCATCTCCAATCAGATGT-TCTGTCTCTGTAAATGAAAC 518604 |||||| |||| | ||||| ||||| ||||||| || | ||||| || | |||| || Sbjct 278 ATTGCAACTTGGTTCTTGGCAGCATCGCCAATCA-ATCTCTCTGTGTCGTTGAATGCCAC 336 Query 518605 ATATGATGGAGTTGTGCGATTACCTTGATCATTCGCAATAATTTCAACTTTACCATTTTG 518664 ||| ||| || || || || ||||||||||| || |||||||||||||| ||||| || Sbjct 337 ATAGCTTGGTGTGGTTCGGTTTCCTTGATCATTGGCGATAATTTCAACTTTTCCATTCTG 396 Query 518665 CCATACACCTACACAACTAAAAGTTGTTCCTAAATCAATACCAA 518708 | || || ||||| ||||||| || ||||| || |||| Sbjct 397 GAACACTCCCACACAGGAGTAAGTTGTCCCCAAATCGATTCCAA 440 >seq1725518 Length=106 Score = 102 bits (112), Expect = 6e-16 Identities = 85/104 (82%), Gaps = 0/104 (0%) Strand=Plus/Plus Query 518180 TACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACATTAAGACCAGCAATT 518239 || |||| ||| || || ||||| |||||||| ||||||| ||||| || |||||||| Sbjct 3 TATGCAAGAGCTGCTGCTGTTGGCTCATTAATGATTCTCATTACATTGAGTCCAGCAATG 62 Query 518240 CTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATA 518283 ||| ||||| ||||||||||||| |||||||||||| || || Sbjct 63 ACTCCAGCATCCTTAGTGGCTTGTCGTTGTGAATCGTTGAAGTA 106 >seq1902441 Length=109 Score = 95.1 bits (104), Expect = 9e-14 Identities = 85/107 (79%), Gaps = 0/107 (0%) Strand=Plus/Minus Query 518177 CCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACATTAAGACCAGCA 518236 || || |||| ||| || || ||||| || ||||| |||| || ||||| || |||||| Sbjct 107 CCGTATGCAAGAGCTGCTGCTGTTGGCTCGTTAATGATTCACATTACATTGAGTCCAGCA 48 Query 518237 ATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATA 518283 ||| ||| ||||| |||||||||||| |||||||||||| || || Sbjct 47 ATTACTCCAGCATCCCTAGTGGCTTGTCGTTGTGAATCGTTGAAGTA 1 >seq823764 Length=5732 Score = 86.0 bits (94), Expect = 4e-11 Identities = 106/145 (73%), Gaps = 0/145 (0%) Strand=Plus/Plus Query 517259 GCAGTCACATTAAGAATACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGGACC 517318 ||||| ||||| | |||||||||||||| | |||||| || || ||||||||||| || Sbjct 4019 GCAGTAACATTCAAGATACCATTGGCATCAATATCAAAAGTTACCTCAATTTGAGGAACA 4078 Query 517319 CCTCTCTGAGCAGGTGGGATCCCTTCCAAATTAAATGTTCCCAGATTATTATTATCTTTA 517378 || | |||| || || ||||| || | || ||||||| | | || ||||| || Sbjct 4079 CCACGGGGAGCCGGAGGAATCCCATCGAGGCGGAAAGTTCCCAAACTCTTGTTATCATTG 4138 Query 517379 GTGAATTTTCGTTCACCCTCGAAAA 517403 | | || |||||||||| || || Sbjct 4139 GACATTTCCCGTTCACCCTGGAGAA 4163 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3583903175639092