Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ophionereis_20fasciata_20[genbank_20GCA_5F900067615.1_202017-02-27] 3,968,282 sequences; 1,184,528,790 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq201371 111 2e-19 seq343327 96.9 4e-15 >seq201371 Length=2102 Score = 111 bits (122), Expect = 2e-19 Identities = 174/244 (71%), Gaps = 14/244 (6%) Strand=Plus/Minus Query 15932 GCGATTCGTTGCGGCGATGACAACAATACCTGTTTCGTTA---TCAAAACCATCCATCTC 15988 ||| || || || || || | || ||| || || |||| |||||||||||||| || Sbjct 1819 GCGGTTAGTAGCAGCAATAATAATAATGCCCGT---GTTACCCTCAAAACCATCCATTTC 1763 Query 15989 TGTCAAAAGCTGGTTAATAGTTTGTTCCCGTTCATCATT--CGCTGGCATACCACCAGCA 16046 || || | |||||||| || ||||| ||||||||||| ||| | | | ||||||| Sbjct 1762 AGTTAATAACTGGTTAAGGGTCTGTTCTCGTTCATCATTACCGCCGCC--AATACCAGCA 1705 Query 16047 CTGCGTTGCTTTCCCACGGCATCAATCTCATCAATGAAGACGATGCATGGTTGATTTTCG 16106 | || || || || |||||||| |||||||| |||||||| || || | |||| Sbjct 1704 CCACGCTGGCGACCGACCGCATCAATTTCATCAATAAAGACGATACAGGGGGCAGTTTCC 1645 Query 16107 CGAGCGACTTC--AAAGAGATCCCGTACACGCTTGGCGCCCACACCAACAAACATCTCCA 16164 ||| |||| ||| | ||| || || | || || || |||||||||||||||| Sbjct 1644 TTAGC--CTTCTTAAACAAATCGCGGACCCTGGAAGCCCCAACCCCAACAAACATCTCCA 1587 Query 16165 CAAA 16168 |||| Sbjct 1586 CAAA 1583 >seq343327 Length=1519 Score = 96.9 bits (106), Expect = 4e-15 Identities = 194/286 (68%), Gaps = 4/286 (1%) Strand=Plus/Plus Query 15885 CGATCAAAGCGACCTGGGCGAAGGAGCGCGTCATCAAGGATATCAACGCGATTCGTTGCG 15944 || ||||| || || || || | || || ||| | | |||| |||||| || || Sbjct 1155 CGGTCAAACCGTCCCGGACGCAATAGGGCTGTATCCAACACATCAGGGCGATTAGTGGCT 1214 Query 15945 GCGATGACAACAATACCTGTTTCGTTATCAAAACCATCCATCTCTGTCAAAAGCTGGTTA 16004 || || |||| ||| || | | ||||| |||||||| || |||| | |||||| Sbjct 1215 GCAATCACAATAATTCCCGGATTACCCTCAAATCCATCCATTTCCGTCAGTAATTGGTTA 1274 Query 16005 ATAGTTTGTTCCCGTTCATCATT--CGCTGGCATACCACCAGCACTGCGTTGCTTTCCCA 16062 | || ||||||||||||||||| ||| | | | || || | ||||| || | Sbjct 1275 AGGGTCTGTTCCCGTTCATCATTACCGCCGCC--AATTCCCGCCCCCCGTTGGCGACCGA 1332 Query 16063 CGGCATCAATCTCATCAATGAAGACGATGCATGGTTGATTTTCGCGAGCGACTTCAAAGA 16122 | |||||||| |||||||| || | | || || ||| || ||| || ||| | Sbjct 1333 CAGCATCAATTTCATCAATAAAAATCAGACAGGGGGAATTATCCTTAGCCTTTTTAAAAA 1392 Query 16123 GATCCCGTACACGCTTGGCGCCCACACCAACAAACATCTCCACAAA 16168 ||||||| || || || || || || ||||||||||||||||| Sbjct 1393 GATCCCGCACCCGGGATGCACCGACCCCCACAAACATCTCCACAAA 1438 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589951388843040