Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ophionereis_20fasciata_20[genbank_20GCA_5F900067615.1_202017-02-27] 3,968,282 sequences; 1,184,528,790 total letters Query= NC_015279.1 Length=190789 Score E Sequences producing significant alignments: (Bits) Value seq577692 477 1e-129 seq856283 351 1e-91 seq3816217 336 3e-87 seq3751544 266 4e-66 seq3654882 170 2e-37 seq658184 131 2e-25 seq3509123 123 3e-23 seq940596 120 4e-22 seq3172301 100 3e-16 seq3746485 87.8 2e-12 >seq577692 Length=2825 Score = 477 bits (528), Expect = 1e-129 Identities = 532/708 (75%), Gaps = 2/708 (0%) Strand=Plus/Plus Query 179739 TGGGATAACTTCTGCGAGTGGGTAACCTCTACCAATAACCGCCTCTATGTCGGTTGGTTC 179798 ||||| | || ||| |||||||| ||||||||||||||||| ||||| |||||||| Sbjct 165 TGGGAACAGTTTTGCACTTGGGTAACATCTACCAATAACCGCCTTTATGTAGGTTGGTTT 224 Query 179799 GGCGTTCTGATGATTCCAACTCTGTTGGCAGCAACTATCTGCTTCATCGTCGCCTTCATC 179858 || || ||||||| || || || | | || || ||||| || | | || || | Sbjct 225 GGTATTGTGATGATCCCTACCTTGCTAACTGCCACCATCTGTTTTGTGTTAGCTTTTGTA 284 Query 179859 GCTGCTCCCCCTGTGGACATCGATGGCATCCGTGAACCCGTCGCTGGTTCACTCATGTAT 179918 ||||| || |||||||| || || |||||||| |||||||| | ||||| || |||| Sbjct 285 GCTGCACCTCCTGTGGATATTGACGGCATCCGCGAACCCGTTTCCGGTTCTCTGTTGTAC 344 Query 179919 GGTAACAACATCATCTCTGGTGCAGTTGTTCCTTCTTCCAACGCAATTGGTCTTCACTTC 179978 || || ||||||||| | | || ||||| || ||| || || ||||| | ||||| Sbjct 345 GGCAATAACATCATCACCGCCGCTGTTGTACCCAGTTCTAATGCGATTGGGTTGCACTTT 404 Query 179979 TATCCCATCTGGGAAGCCGCATCGCTTGACGAGTGGCTGTATAACGGTGGTCCTTTCCAA 180038 ||||||||||||||||| ||| |||| || ||||| |||||||| || || | ||| Sbjct 405 TATCCCATCTGGGAAGCGGCAAATATTGATGAATGGCTTTATAACGGCGGCCCCTACCAG 464 Query 180039 CTTGTCGTCTTCCACTTCCTGATTGGCATCTATGCCTACATGGGTCGTGAGTGGGAACTT 180098 | | || ||||||||||| || ||||| | | ||| |||||||||||||||||||| Sbjct 465 TTGATTGTTTTCCACTTCCTAATCGGCATTTTTTGCTATATGGGTCGTGAGTGGGAACTG 524 Query 180099 TCTTATCGCTTGGGTATGCGCCCCTGGATCTGC-GTAGCATATTCTGCTCCAGTCGCTGC 180157 |||||||| || || ||||| || ||||| ||| || || ||| ||||| || ||||| Sbjct 525 TCTTATCGGTTAGGAATGCGTCCTTGGAT-TGCTGTTGCTTATAGCGCTCCTGTAGCTGC 583 Query 180158 AGCATCTGCTGTATTCCTCGTCTATCCTTTCGGTCAAGGTTCATTCTCTGACGCAATGCC 180217 || | || ||| | | || ||| || ||||||||||||| || ||||| | | || Sbjct 584 TGCGACGGCGGTACTGTTAGTTTATTCTATCGGTCAAGGTTCTTTTTCTGATGGTTTACC 643 Query 180218 CCTCGGCATTTCTGGCACCTTCAACTACATGCTTGTTTTCCAAGCAGAGCACAACATCCT 180277 || || ||||||||||| || |||| ||| | || | ||||||||||| || | | Sbjct 644 GCTGGGGATTTCTGGCACATTTAACTTTATGTTAGTGCTGCAAGCAGAGCATAATGTTTT 703 Query 180278 GATGCACCCCTTCCACATGCTGGGAGTAGCAGGTGTCTTCGGCGGTTCACTGTTCTCCGC 180337 |||||||||||||| |||||||||||||| |||||||| || || | || ||||| || Sbjct 704 AATGCACCCCTTCCATATGCTGGGAGTAGCTGGTGTCTTTGGTGGCGCTCTTTTCTCAGC 763 Query 180338 AATGCACGGTTCACTGGTTACCTCTTCACTGGTTCGTGAAACCACTGAAACTGAGTCCCA 180397 ||||||||||| ||||| || ||||| | || |||||||||||||||| ||| ||| Sbjct 764 TATGCACGGTTCTCTGGTGACATCTTCTTTAGTACGTGAAACCACTGAAATTGAAAGCCA 823 Query 180398 GAACTACGGTTACAAGTTTGGTCAAGAAGAAGAGACCTACAACATCGT 180445 ||| ||||| ||||| ||||||||||| || || ||||| || Sbjct 824 AAACCGGGGTTATCGCTTTGGACAAGAAGAAGAAACTTATAACATTGT 871 >seq856283 Length=1080 Score = 351 bits (388), Expect = 1e-91 Identities = 439/602 (73%), Gaps = 0/602 (0%) Strand=Plus/Minus Query 181422 GGTTTGACATCCTTGATGACTGGCTTAAACGCGACCGCTTTGTCTTTGTGGGCTGGTCTG 181481 ||||||| |||| ||||||||||| || ||||| || || || |||||||| ||||| | Sbjct 1080 GGTTTGATGTCCTCGATGACTGGCTGAAGCGCGATCGGTTCGTATTTGTGGGATGGTCGG 1021 Query 181482 GACTACTTCTTTTTCCCACTGCTTATCTTGCAATTGGGGGCTGGCTCACTGGCACTACTT 181541 | | || ||||| ||| || ||||| | || ||||| ||| | || || || || | Sbjct 1020 GTATCCTGCTTTTCCCCTGCGCCTATCTATCTATCGGGGGATGGTTGACAGGAACCACCT 961 Query 181542 TTGTTACGTCGTGGTACACCCACGGATTGGCGTCTTCCTACCTTGAGGGTGCTAATTTCC 181601 ||||||| || ||||||||||||||| | || ||||||||| || ||| || || | Sbjct 960 TTGTTACCTCTTGGTACACCCACGGACTCGCCAGTTCCTACCTAGAAGGTTGCAACTTTC 901 Query 181602 TTACAGCGGCTGTGTCAACGCCTGCTGACGCTATGGGTCATTCTCTTCTTCTACTTTGGG 181661 | || || || || || || ||| || | |||| || || || || | || |||| Sbjct 900 TGACCGCTGCCGTCAGCACCCCCGCTAACAGTTTGGGGCACTCCCTACTGTTCCTGTGGG 841 Query 181662 GTCCTGAAGCTCAGGGCGATTTCGTCCGCTGGGTCCAACTTGGGGGACTCTGGGCTTTTG 181721 |||| ||||||||| | || || ||||||| |||| | ||||| | |||||||||| Sbjct 840 GTCCCGAAGCTCAGTGGGACTTTACCCGCTGGTGCCAATTAGGGGGTTTATGGGCTTTTG 781 Query 181722 TGGCGCTCCACGGAGCCTTCGCTCTTATCGGTTTTATGCTCAGGCAATTTGAACTTGCTC 181781 | || || || ||||| ||||| || || || || || | || || ||| | || | Sbjct 780 TAGCCCTGCATGGAGCTTTCGCACTGATTGGGTTCTGCCTGCGTCAGTTGGAAATCGCCC 721 Query 181782 GTCTAATCGGAATCCGACCCTACAATGCGATTGCTTTTTCCGGTCCTATTGCTGTATTCG 181841 | | | || || || || || |||||||| ||||| |||| |||||||| || |||| Sbjct 720 GGTTGGTTGGCATTCGTCCTTATAATGCGATCGCTTTCACCGGCCCTATTGCCGTGTTCG 661 Query 181842 TCTCTGTATTTCTCATCTATCCTCTGGGACAATCCAGTTGGTTCTTTGCGCCGAGTTTCG 181901 | ||||| | || || || |||| ||||| | ||||||||||| || || || | Sbjct 660 TGAGCGTATTCTTAATGTACCCCTTGGGTCAATCTGGATGGTTCTTTGCTCCCAGCTTTG 601 Query 181902 GTGTCGCGGCGATTTTCCGCTTCCTTCTCTTCCTCCAGGGCTTTCATAATTGGACGCTCA 181961 |||| || | || ||||| || | || ||| |||| || || || || |||||||||| Sbjct 600 GTGTAGCAGGCATCTTCCGGTTTATCCTATTCTTCCAAGGATTCCACAACTGGACGCTCA 541 Query 181962 ATCCCTTCCATATGATGGGTGTTGCTGGTATCCTGGGTGGCGCATTACTCTCTGCAATTC 182021 | |||||||| |||||||| ||||| || ||||||||||| || |||||| ||| |||| Sbjct 540 ACCCCTTCCACATGATGGGAGTTGCCGGCATCCTGGGTGGTGCGCTACTCTGTGCTATTC 481 Query 182022 AC 182023 || Sbjct 480 AC 479 Score = 140 bits (154), Expect = 4e-28 Identities = 151/200 (76%), Gaps = 0/200 (0%) Strand=Plus/Minus Query 182052 AAGACGGTGACCAAGCAAATACTTTCAAAGCATTCGATTCAACTCAAGAAGAAGAAACCT 182111 ||||||| || | | || || ||| || || || | || |||| |||||||||| Sbjct 418 AAGACGGAGAAGGATCTAACACCTTCCGTGCTTTTGAACCCACCCAAGCCGAAGAAACCT 359 Query 182112 ATTCAATGGTTACAGCGAACCGCTTCTGGTCTCAGATCTTCGGTATTGCGTTTAGCAATA 182171 | || ||||| ||||| |||||||||||||| ||||| ||||||||||| ||| ||| | Sbjct 358 ACTCCATGGTGACAGCTAACCGCTTCTGGTCCCAGATTTTCGGTATTGCTTTTTCCAACA 299 Query 182172 AGAGGTGGTTGCATTTCTTTATGCTCTTTGTTCCTGTTATGGGTCTTTGGACAAGTTCCA 182231 | | ||||| || ||||| ||||| ||||||||||| | || || |||| |||||| Sbjct 298 AACGCTGGTTACACTTCTTCATGCTGTTTGTTCCTGTAACAGGGCTGTGGATGTGTTCCA 239 Query 182232 TCGGTATTATTGGTCTTGCT 182251 ||||| | | ||||| ||| Sbjct 238 TCGGTGTAGTAGGTCTAGCT 219 >seq3816217 Length=329 Score = 336 bits (372), Expect = 3e-87 Identities = 272/329 (83%), Gaps = 0/329 (0%) Strand=Plus/Plus Query 180255 TTCCAAGCAGAGCACAACATCCTGATGCACCCCTTCCACATGCTGGGAGTAGCAGGTGTC 180314 ||||||||||| |||||||||||||||||||||||||| ||| ||||||| || ||||| Sbjct 1 TTCCAAGCAGAACACAACATCCTGATGCACCCCTTCCATATGTTGGGAGTTGCTGGTGTA 60 Query 180315 TTCGGCGGTTCACTGTTCTCCGCAATGCACGGTTCACTGGTTACCTCTTCACTGGTTCGT 180374 ||||| ||| | |||||||||| ||||||||||| |||| || ||||| |||| ||| Sbjct 61 TTCGGTGGTGCTTTGTTCTCCGCGATGCACGGTTCTTTGGTAACTTCTTCCTTGGTGCGT 120 Query 180375 GAAACCACTGAAACTGAGTCCCAGAACTACGGTTACAAGTTTGGTCAAGAAGAAGAGACC 180434 |||||||| |||| || || || |||||||||||||| || |||||||||||||| ||| Sbjct 121 GAAACCACCGAAATCGAATCTCAAAACTACGGTTACAAATTCGGTCAAGAAGAAGAAACC 180 Query 180435 TACAACATCGTTGCTGCACATGGATACTTCGGTCGTCTGATCTTCCAGTATGCATCGTTC 180494 |||||||| || || || || || ||||||||||| ||||||||||| ||||| || ||| Sbjct 181 TACAACATTGTGGCAGCTCACGGTTACTTCGGTCGCCTGATCTTCCAATATGCTTCTTTC 240 Query 180495 AACAACTCCCGTTCACTTCACTTCTTCCTGGCAGCATGGCCTGTCGTTGGCATCTGGTTC 180554 |||||| |||||| || ||||||||| ||| || ||||| || | |||||||||||| Sbjct 241 AACAACAGCCGTTCCCTGCACTTCTTCTTGGGTGCTTGGCCGGTAATCGGCATCTGGTTC 300 Query 180555 ACTGCACTGGGCGTAAGCACCATGGCATT 180583 || || | || ||| ||||||||| || Sbjct 301 ACCGCTTTAGGTGTATCCACCATGGCCTT 329 >seq3751544 Length=281 Score = 266 bits (294), Expect = 4e-66 Identities = 226/276 (82%), Gaps = 2/276 (1%) Strand=Plus/Plus Query 179757 TGGGTAACCTCTACCAATAACCGCCTCTATGTCGGTTGGTTCGGCGTTCTGATGATTCCA 179816 |||||||| || ||||| |||||||| ||||| || |||||||| ||||||||||| || Sbjct 7 TGGGTAACATCCACCAACAACCGCCTTTATGTAGGCTGGTTCGGTGTTCTGATGATCCCT 66 Query 179817 ACTCTGTTGGCAGCAACTATCTGCTTCATCGTCGCCTTCATCGCTGCTCCCCCTGTGGAC 179876 || || | | || || ||||||| |||| |||| || |||||||||||||| |||||| Sbjct 67 ACCCTACTAACTGCTACCATCTGCTACATCATCGCTTTTATCGCTGCTCCCCCCGTGGAC 126 Query 179877 ATCGATGGCATCCGTGAACCCGTCGCTGGTTCACTCATGTATGGTAACAACATCATCTCT 179936 || || || ||||| |||||||| |||||||| || |||| || ||||||||||||||| Sbjct 127 ATTGACGGTATCCGCGAACCCGTAGCTGGTTCTCTGTTGTACGGCAACAACATCATCTCT 186 Query 179937 GGTGCAGTTGTTCCTTCTTCCAACGCAATTGGTCTTCACTTCTATCCCATCTGGGAAGCC 179996 ||||| ||||||||||| ||||| || || ||||| |||||||| ||||| |||||||| Sbjct 187 GGTGCGGTTGTTCCTTCCTCCAATGCGATCGGTCTGCACTTCTACCCCATTTGGGAAGCA 246 Query 179997 GCATCGCTT-GACGAGTGGCTGTATAACGGTGGTCC 180031 || |||| || || ||||| || |||||||| || Sbjct 247 GC-CAGCTTGGATGAATGGCTCTACAACGGTGGCCC 281 >seq3654882 Length=237 Score = 170 bits (188), Expect = 2e-37 Identities = 178/234 (76%), Gaps = 0/234 (0%) Strand=Plus/Minus Query 182052 AAGACGGTGACCAAGCAAATACTTTCAAAGCATTCGATTCAACTCAAGAAGAAGAAACCT 182111 ||||||| || | | || || ||| ||| || || | || |||| |||||||||| Sbjct 234 AAGACGGAGAAGGATCTAACACCTTCCGAGCCTTTGAACCGACCCAAGCGGAAGAAACCT 175 Query 182112 ATTCAATGGTTACAGCGAACCGCTTCTGGTCTCAGATCTTCGGTATTGCGTTTAGCAATA 182171 |||| ||||| ||||| |||||||| |||||||| || ||||||||||| ||| || | Sbjct 174 ATTCCATGGTGACAGCCAACCGCTTTTGGTCTCAAATTTTCGGTATTGCTTTTTCAAACA 115 Query 182172 AGAGGTGGTTGCATTTCTTTATGCTCTTTGTTCCTGTTATGGGTCTTTGGACAAGTTCCA 182231 | | ||||| || ||||| ||||| || ||||| || | ||||| |||| |||||| Sbjct 114 AACGTTGGTTACACTTCTTCATGCTGTTCGTTCCCGTAACAGGTCTGTGGATGTGTTCCA 55 Query 182232 TCGGTATTATTGGTCTTGCTCTCAACCTTCGTGCTTATGACTTTGTATCCCAAG 182285 ||||| | | ||||| ||| | ||||| |||||||||||||| || || |||| Sbjct 54 TCGGTGTAGTGGGTCTAGCTGTAAACCTGCGTGCTTATGACTTCGTGTCACAAG 1 >seq658184 Length=760 Score = 131 bits (144), Expect = 2e-25 Identities = 126/162 (78%), Gaps = 0/162 (0%) Strand=Plus/Minus Query 181422 GGTTTGACATCCTTGATGACTGGCTTAAACGCGACCGCTTTGTCTTTGTGGGCTGGTCTG 181481 ||||||| |||| ||||||||||| || || || |||||||| || || || ||||||| Sbjct 162 GGTTTGATGTCCTCGATGACTGGCTGAAGCGTGATCGCTTTGTATTCGTAGGATGGTCTG 103 Query 181482 GACTACTTCTTTTTCCCACTGCTTATCTTGCAATTGGGGGCTGGCTCACTGGCACTACTT 181541 | | || ||||| ||| ||| ||||| | || || || |||||||| || ||||| | Sbjct 102 GTATCCTGCTTTTCCCCTGTGCCTATCTATCTATCGGCGGATGGCTCACCGGAACTACCT 43 Query 181542 TTGTTACGTCGTGGTACACCCACGGATTGGCGTCTTCCTACC 181583 ||||||| || |||||||| |||||| | || |||||||| Sbjct 42 TTGTTACCTCTTGGTACACTCACGGACTCGCCAGTTCCTACC 1 >seq3509123 Length=199 Score = 123 bits (136), Expect = 3e-23 Identities = 121/154 (79%), Gaps = 4/154 (3%) Strand=Plus/Plus Query 180591 AACGGTTTCAACTTCAACCAGTCCATCATTGATGGTCAA--GGTCGTGTGCTCAACACTT 180648 |||||||||||||||||||| ||| | || || || | ||||| || | ||||| | Sbjct 1 AACGGTTTCAACTTCAACCAATCCGTAATGGA--CTCCAGCGGTCGGGTAGTTAACACCT 58 Query 180649 GGGCAGACGTACTCAACCGCGCTGGTCTGGGTATGGAAGTTATGCACGAGCGTAATGCTC 180708 |||| || || ||||||||||| |||||||||||||| ||||||||||| || |||| Sbjct 59 GGGCTGATGTCATCAACCGCGCTAACCTGGGTATGGAAGTAATGCACGAGCGCAACGCTC 118 Query 180709 ACAACTTCCCACTTGACCTGGCAGCTGCTGAGTC 180742 |||||||||| | || | || |||||||||| Sbjct 119 ACAACTTCCCCTTAGATTTAGCTTCTGCTGAGTC 152 >seq940596 Length=2461 Score = 120 bits (132), Expect = 4e-22 Identities = 134/179 (75%), Gaps = 0/179 (0%) Strand=Plus/Minus Query 171903 TATCTTCTGGACGCTGCAGATGAAGCGGGGGTTGATGCTCCATATTCCTGCCGTGCCGGT 171962 ||| |||| || ||||| || ||||| || | ||| || || ||||||||||| ||| Sbjct 1379 TATATTCTCGATGCTGCCGAAGAAGCTGGACTAGATCTGCCCTACTCCTGCCGTGCTGGT 1320 Query 171963 GCCTGTTCCAGCTGTGCTGGTAAACTTGAGAGTGGTACGGTAGATCAGTCAGAGCAATCT 172022 || || |||| ||||||||||| | | |||||||| | || ||||| || || ||| Sbjct 1319 GCTTGCTCCACCTGTGCTGGTACAATCACCAGTGGTACCATTGACCAGTCTGATCAGTCT 1260 Query 172023 TTCCTTGATGATGATCAAATGGACGCAGGATTCGTTCTGACCTGTGTTGCTTATCCTAC 172081 ||| | ||||||||||| || || || || | ||| |||| ||||| || ||||| || Sbjct 1259 TTCTTAGATGATGATCAGATCGAAGCTGGGTATGTTTTGACTTGTGTAGCCTATCCCAC 1201 >seq3172301 Length=157 Score = 100 bits (110), Expect = 3e-16 Identities = 112/150 (75%), Gaps = 0/150 (0%) Strand=Plus/Minus Query 180099 TCTTATCGCTTGGGTATGCGCCCCTGGATCTGCGTAGCATATTCTGCTCCAGTCGCTGCA 180158 || || |||||||| ||||| || |||||||||||||| || || || || || || Sbjct 155 TCCTACCGCTTGGGAATGCGTCCTTGGATCTGCGTAGCTTACAGCGCACCTGTTGCGGCT 96 Query 180159 GCATCTGCTGTATTCCTCGTCTATCCTTTCGGTCAAGGTTCATTCTCTGACGCAATGCCC 180218 || ||| |||||| | |||| || |||| |||||||| ||||| |||| ||||| Sbjct 95 GCTAGTGCAGTATTCTTGATCTACCCCATCGGACAAGGTTCTTTCTCCGACGGTATGCCT 36 Query 180219 CTCGGCATTTCTGGCACCTTCAACTACATG 180248 || || || || || || ||||||| |||| Sbjct 35 CTGGGTATCTCCGGAACTTTCAACTTCATG 6 >seq3746485 Length=278 Score = 87.8 bits (96), Expect = 2e-12 Identities = 63/73 (86%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 129310 GGGGTTATAGCTCAACTGGTAGAGCGCCTGCTTTGCACGCAGGAGGTTTGGGGTTCGAGT 129369 |||| ||||||||| |||| ||||||||||| ||||||||||||||| || ||||||| Sbjct 76 GGGGCTATAGCTCAGCTGGGAGAGCGCCTGCCTTGCACGCAGGAGGTCTGCGGTTCGATC 17 Query 129370 CCCCATAACTCCA 129382 || |||| ||||| Sbjct 16 CCGCATAGCTCCA 4 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 580118967071280