Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ophionereis_20fasciata_20[genbank_20GCA_5F900067615.1_202017-02-27] 3,968,282 sequences; 1,184,528,790 total letters Query= NC_015283.1 Length=176428 Score E Sequences producing significant alignments: (Bits) Value seq577692 383 2e-101 seq3816217 210 2e-49 seq3751544 203 3e-47 seq3509123 113 5e-20 seq3172301 107 2e-18 >seq577692 Length=2825 Score = 383 bits (424), Expect = 2e-101 Identities = 507/701 (72%), Gaps = 2/701 (0%) Strand=Plus/Plus Query 168489 AGTTCTGCGAATGGGTAACAAGCACTAACAACAGACTTTATGTTGGTTGGTTCGGTGTCT 168548 |||| ||| ||||||||| || || ||| | |||||||| |||||||| ||| | Sbjct 172 AGTTTTGCACTTGGGTAACATCTACCAATAACCGCCTTTATGTAGGTTGGTTTGGTATTG 231 Query 168549 TAATGATCCCATGTTTATTAACAGC-AGCAGCATGTTTCATTGTTGCATTTATTGCTGCA 168607 | |||||||| || |||| || | || | ||||| | | || ||| | |||||| Sbjct 232 TGATGATCCCTACCTTGCTAACTGCCACCATC-TGTTTTGTGTTAGCTTTTGTAGCTGCA 290 Query 168608 CCACCTGTCGATATCGACGGAATCAGAGAACCTGTAGCAGGTGCTCTAATGTATGGAAAC 168667 || ||||| ||||| ||||| ||| | ||||| || | ||| |||| |||| || || Sbjct 291 CCTCCTGTGGATATTGACGGCATCCGCGAACCCGTTTCCGGTTCTCTGTTGTACGGCAAT 350 Query 168668 AACATCATCTCAGGTGCAGTTGTTCCATCTTCAAACGCAATCGGTCTACACTTCTACCCA 168727 ||||||||| | | || ||||| || ||| || || || || | ||||| || || Sbjct 351 AACATCATCACCGCCGCTGTTGTACCCAGTTCTAATGCGATTGGGTTGCACTTTTATCCC 410 Query 168728 ATTTGGGAAGCAGCTACAATCGATGAGTGGTTATATAATGGTGGTCCTTACCAGTTGGTA 168787 || |||||||| || | || ||||| ||| | ||||| || || || ||||||||| | Sbjct 411 ATCTGGGAAGCGGCAAATATTGATGAATGGCTTTATAACGGCGGCCCCTACCAGTTGATT 470 Query 168788 ATCTTCCACTTCCTAATCGGAATCTCTGCCTACATGGGTAGACAGTGGGAATTATCATAC 168847 | ||||||||||||||||| || | | ||| |||||| | |||||||| | || || Sbjct 471 GTTTTCCACTTCCTAATCGGCATTTTTTGCTATATGGGTCGTGAGTGGGAACTGTCTTAT 530 Query 168848 AGACTAGGTATGAGACCTTGGATCTGTGTTGCTTATTCAGCACCAGTATCTGCAGCATTT 168907 | |||| ||| | |||||||| |||||||||| || || ||| |||| || Sbjct 531 CGGTTAGGAATGCGTCCTTGGATTGCTGTTGCTTATAGCGCTCCTGTAGCTGCTGCGACG 590 Query 168908 GCAGTATTCCTTGTATACCCATTTGGTCAGGGTTCTTTCTCTGATGGTATGCCTCTAGGA 168967 || ||| | | || || | | ||||| |||||||| ||||||||| | || || || Sbjct 591 GCGGTACTGTTAGTTTATTCTATCGGTCAAGGTTCTTTTTCTGATGGTTTACCGCTGGGG 650 Query 168968 ATTTCTGGAACATTCAACTTCATGTTCGTATTCCAAGCAGAGCACAACATTCTTATGCAT 169027 |||||||| ||||| ||||| ||||| || | ||||||||||| || || | ||||| Sbjct 651 ATTTCTGGCACATTTAACTTTATGTTAGTGCTGCAAGCAGAGCATAATGTTTTAATGCAC 710 Query 169028 CCCTTCCATATGGCAGGAGTAGCAGGTATGTTCGGTGGATCTCTATTCTCCGCAATGCAT 169087 |||||||||||| |||||||| ||| | || ||||| |||| ||||| || ||||| Sbjct 711 CCCTTCCATATGCTGGGAGTAGCTGGTGTCTTTGGTGGCGCTCTTTTCTCAGCTATGCAC 770 Query 169088 GGTTCACTTGTAACATCTTCTCTAATCAGAGAGACTACTGAGGAAGAATCTCAGAACTAT 169147 ||||| || || ||||||||| || | | || || ||||| ||| || ||| Sbjct 771 GGTTCTCTGGTGACATCTTCTTTAGTACGTGAAACCACTGAAATTGAAAGCCAAAACCGG 830 Query 169148 GGTTACAAGTTCGGTCAAGAAGAAGAAACCTATAATATTGT 169188 ||||| || || |||||||||||||| ||||| ||||| Sbjct 831 GGTTATCGCTTTGGACAAGAAGAAGAAACTTATAACATTGT 871 >seq3816217 Length=329 Score = 210 bits (232), Expect = 2e-49 Identities = 194/246 (79%), Gaps = 0/246 (0%) Strand=Plus/Plus Query 168998 TTCCAAGCAGAGCACAACATTCTTATGCATCCCTTCCATATGGCAGGAGTAGCAGGTATG 169057 ||||||||||| |||||||| || ||||| |||||||||||| ||||| || ||| | Sbjct 1 TTCCAAGCAGAACACAACATCCTGATGCACCCCTTCCATATGTTGGGAGTTGCTGGTGTA 60 Query 169058 TTCGGTGGATCTCTATTCTCCGCAATGCATGGTTCACTTGTAACATCTTCTCTAATCAGA 169117 |||||||| || | |||||||| ||||| ||||| | ||||| ||||| | | | Sbjct 61 TTCGGTGGTGCTTTGTTCTCCGCGATGCACGGTTCTTTGGTAACTTCTTCCTTGGTGCGT 120 Query 169118 GAGACTACTGAGGAAGAATCTCAGAACTATGGTTACAAGTTCGGTCAAGAAGAAGAAACC 169177 || || || || |||||||| ||||| |||||||| ||||||||||||||||||||| Sbjct 121 GAAACCACCGAAATCGAATCTCAAAACTACGGTTACAAATTCGGTCAAGAAGAAGAAACC 180 Query 169178 TATAATATTGTTGCAGCACATGGATACTTCGGTAGATTAATCTTCCAGTATGCAAGTTTC 169237 || || ||||| ||||| || || ||||||||| | | |||||||| ||||| |||| Sbjct 181 TACAACATTGTGGCAGCTCACGGTTACTTCGGTCGCCTGATCTTCCAATATGCTTCTTTC 240 Query 169238 AACAAC 169243 |||||| Sbjct 241 AACAAC 246 >seq3751544 Length=281 Score = 203 bits (224), Expect = 3e-47 Identities = 212/276 (77%), Gaps = 2/276 (1%) Strand=Plus/Plus Query 168500 TGGGTAACAAGCACTAACAACAGACTTTATGTTGGTTGGTTCGGTGTCTTAATGATCCCA 168559 ||||||||| ||| |||||| | |||||||| || ||||||||||| | |||||||| Sbjct 7 TGGGTAACATCCACCAACAACCGCCTTTATGTAGGCTGGTTCGGTGTTCTGATGATCCCT 66 Query 168560 TGTTTATTAACAGC-AGCAGCATGTTTCATTGTTGCATTTATTGCTGCACCACCTGTCGA 168618 || |||| || | || | || | ||| | || ||||| ||||| || || || || Sbjct 67 ACCCTACTAACTGCTACCATC-TGCTACATCATCGCTTTTATCGCTGCTCCCCCCGTGGA 125 Query 168619 TATCGACGGAATCAGAGAACCTGTAGCAGGTGCTCTAATGTATGGAAACAACATCATCTC 168678 || ||||| ||| | ||||| ||||| ||| |||| |||| || |||||||||||||| Sbjct 126 CATTGACGGTATCCGCGAACCCGTAGCTGGTTCTCTGTTGTACGGCAACAACATCATCTC 185 Query 168679 AGGTGCAGTTGTTCCATCTTCAAACGCAATCGGTCTACACTTCTACCCAATTTGGGAAGC 168738 ||||| |||||||| || || || || |||||||| ||||||||||| ||||||||||| Sbjct 186 TGGTGCGGTTGTTCCTTCCTCCAATGCGATCGGTCTGCACTTCTACCCCATTTGGGAAGC 245 Query 168739 AGCTACAATCGATGAGTGGTTATATAATGGTGGTCC 168774 ||| | | ||||| ||| | || || ||||| || Sbjct 246 AGCCAGCTTGGATGAATGGCTCTACAACGGTGGCCC 281 >seq3509123 Length=199 Score = 113 bits (124), Expect = 5e-20 Identities = 141/192 (73%), Gaps = 6/192 (3%) Strand=Plus/Plus Query 169334 AACGGATTTAACTTTAACCAATCAGTTGTAGATGTTAACGGTAAGATCATTCCTACATGG 169393 ||||| || ||||| |||||||| || | || | |||| | | || || ||| Sbjct 1 AACGGTTTCAACTTCAACCAATCCGTAATGGACTCCAGCGGTCGGGTAGTTAACACCTGG 60 Query 169394 GGTGACGTACTTAACAGAGCAAACCTTGGTATGGAAGTAATGCATGAGCGTAACGCTCAC 169453 | ||| || | ||| | || ||||| ||||||||||||||||| ||||| ||||||||| Sbjct 61 GCTGATGTCATCAACCGCGCTAACCTGGGTATGGAAGTAATGCACGAGCGCAACGCTCAC 120 Query 169454 AACTTCCCACTAGACTTAGCATCTGCTGAGACTACAGAG---GTTGCTTTAACTGCACCA 169510 |||||||| |||| ||||| ||||||||| || ||| || ||||| |||||| Sbjct 121 AACTTCCCCTTAGATTTAGCTTCTGCTGAGTCT---GAGCCTGTAGCTTTGGTTGCACCT 177 Query 169511 ACAATCGGTTAA 169522 |||||| ||| Sbjct 178 CAAATCGGCTAA 189 >seq3172301 Length=157 Score = 107 bits (118), Expect = 2e-18 Identities = 118/157 (75%), Gaps = 0/157 (0%) Strand=Plus/Minus Query 168840 TATCATACAGACTAGGTATGAGACCTTGGATCTGTGTTGCTTATTCAGCACCAGTATCTG 168899 |||| ||| | | || ||| | ||||||||||| || ||||| ||||| || | | Sbjct 157 TATCCTACCGCTTGGGAATGCGTCCTTGGATCTGCGTAGCTTACAGCGCACCTGTTGCGG 98 Query 168900 CAGCATTTGCAGTATTCCTTGTATACCCATTTGGTCAGGGTTCTTTCTCTGATGGTATGC 168959 | || |||||||||| | | ||||| | || || ||||||||||| || ||||||| Sbjct 97 CTGCTAGTGCAGTATTCTTGATCTACCCCATCGGACAAGGTTCTTTCTCCGACGGTATGC 38 Query 168960 CTCTAGGAATTTCTGGAACATTCAACTTCATGTTCGT 168996 |||| || || || ||||| |||||||||||||| || Sbjct 37 CTCTGGGTATCTCCGGAACTTTCAACTTCATGTTGGT 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 536443306983360