Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ophionereis_20fasciata_20[genbank_20GCA_5F900067615.1_202017-02-27] 3,968,282 sequences; 1,184,528,790 total letters Query= NC_015284.1 Length=183806 Score E Sequences producing significant alignments: (Bits) Value seq577692 351 1e-91 seq856283 241 1e-58 seq3816217 214 2e-50 seq3751544 203 4e-47 seq958281 132 5e-26 seq3654882 129 7e-25 seq658184 113 5e-20 seq3509123 109 6e-19 seq2226574 93.3 5e-14 >seq577692 Length=2825 Score = 351 bits (388), Expect = 1e-91 Identities = 500/701 (71%), Gaps = 2/701 (0%) Strand=Plus/Plus Query 171818 AGTTCTGCGAATGGGTAACCTCAACTAACAACAGAATTTATGTTGGTTGGTTCGGTGTAC 171877 |||| ||| |||||||| || || || ||| | ||||||| |||||||| ||| | Sbjct 172 AGTTTTGCACTTGGGTAACATCTACCAATAACCGCCTTTATGTAGGTTGGTTTGGTATTG 231 Query 171878 TCATGATCCCATGTTTGCTCACAGC-AGCAGCATGCTTCATCGTTGCATTCATTGCAGCA 171936 | |||||||| ||||| || || | || | || || | | || || | || ||| Sbjct 232 TGATGATCCCTACCTTGCTAACTGCCACCATC-TGTTTTGTGTTAGCTTTTGTAGCTGCA 290 Query 171937 CCTCCTGTCGATATCGACGGAATCAGAGAACCAGTTGCGGGTTCTTTCTTATATGGTAAC 171996 |||||||| ||||| ||||| ||| | ||||| ||| | |||||| | || || || || Sbjct 291 CCTCCTGTGGATATTGACGGCATCCGCGAACCCGTTTCCGGTTCTCTGTTGTACGGCAAT 350 Query 171997 AACATCATCTCTGGTGCAGTTGTTCCATCATCAAACGCAATAGGTCTCCACTTCTACCCT 172056 ||||||||| | | || ||||| || || || || || || | ||||| || || Sbjct 351 AACATCATCACCGCCGCTGTTGTACCCAGTTCTAATGCGATTGGGTTGCACTTTTATCCC 410 Query 172057 ATCTGGGAAGCAGCAACCGTAGATGAATGGTTGTACAATGGTGGTCCTTATCAGTTGGTA 172116 ||||||||||| |||| | ||||||||| | || || || || || || |||||| | Sbjct 411 ATCTGGGAAGCGGCAAATATTGATGAATGGCTTTATAACGGCGGCCCCTACCAGTTGATT 470 Query 172117 ATCTTCCACTTCCTTATCGGTATCTCAGCATACATGGGAAGACAGTGGGAACTATCATAC 172176 | ||||||||||| ||||| || | || ||||| | |||||||||| || || Sbjct 471 GTTTTCCACTTCCTAATCGGCATTTTTTGCTATATGGGTCGTGAGTGGGAACTGTCTTAT 530 Query 172177 AGATTAGGTATGAGACCATGGATATGTGTAGCATATTCAGCACCTGTATCAGCAGCATTT 172236 | ||||| ||| | || ||||| ||| || ||| || |||||| | || || Sbjct 531 CGGTTAGGAATGCGTCCTTGGATTGCTGTTGCTTATAGCGCTCCTGTAGCTGCTGCGACG 590 Query 172237 GCTGTGTTCCTTGTGTATCCATTCGGTCAGGGTTCATTCTCTGATGGTATGCCACTAGGT 172296 || || | | || ||| | ||||||| ||||| || ||||||||| | || || || Sbjct 591 GCGGTACTGTTAGTTTATTCTATCGGTCAAGGTTCTTTTTCTGATGGTTTACCGCTGGGG 650 Query 172297 ATCTCAGGTACGTTCAACTTTATGTTCGTGTTCCAAGCAGAGCATAACATTCTAATGCAT 172356 || || || || || ||||||||||| ||| | |||||||||||||| || ||||||| Sbjct 651 ATTTCTGGCACATTTAACTTTATGTTAGTGCTGCAAGCAGAGCATAATGTTTTAATGCAC 710 Query 172357 CCTTTCCACATGGCAGGAGTAGCAGGAATGTTTGGAGGATCTTTATTCTCAGCAATGCAC 172416 || ||||| ||| |||||||| || | ||||| || || | |||||||| |||||| Sbjct 711 CCCTTCCATATGCTGGGAGTAGCTGGTGTCTTTGGTGGCGCTCTTTTCTCAGCTATGCAC 770 Query 172417 GGTTCTTTAGTTACATCTTCTCTAATCAGAGAGACAACTGAAGCAGAATCACAGAACTAC 172476 |||||| | || ||||||||| || | | || || |||||| ||| || ||| Sbjct 771 GGTTCTCTGGTGACATCTTCTTTAGTACGTGAAACCACTGAAATTGAAAGCCAAAACCGG 830 Query 172477 GGATACAAGTTCGGACAAGAAGAAGAAACATACAACATAGT 172517 || || || ||||||||||||||||| || ||||| || Sbjct 831 GGTTATCGCTTTGGACAAGAAGAAGAAACTTATAACATTGT 871 >seq856283 Length=1080 Score = 241 bits (266), Expect = 1e-58 Identities = 414/601 (69%), Gaps = 0/601 (0%) Strand=Plus/Minus Query 172949 GGTTTGATGTTCTTGACGACTGGTTAAAGAGAGATCGTTTCGTATTCATCGGATGGTCTG 173008 |||||||||| || || |||||| | ||| | ||||| |||||||| | |||||||| | Sbjct 1080 GGTTTGATGTCCTCGATGACTGGCTGAAGCGCGATCGGTTCGTATTTGTGGGATGGTCGG 1021 Query 173009 GTCTTTTACTTCTACCTTGTGCTTACCTTTCTATCGGTGGTTGGTTCTTAGGAACTACCT 173068 || | | ||| | || || || || || |||||||| || ||||| |||||| |||| Sbjct 1020 GTATCCTGCTTTTCCCCTGCGCCTATCTATCTATCGGGGGATGGTTGACAGGAACCACCT 961 Query 173069 TCGTTACATCATGGTATACACATGGTATTGCATCTTCATATCTTGAAGGAGCAAACTTTT 173128 | ||||| || ||||| || || || | || ||| || || ||||| |||||| Sbjct 960 TTGTTACCTCTTGGTACACCCACGGACTCGCCAGTTCCTACCTAGAAGGTTGCAACTTTC 901 Query 173129 TAACAGCAGCAGTCTCCACACCTGGCGACGCAATGGGTCATAGTCTTCTGTTCCTTTGGG 173188 | || || || ||| ||| || | || |||| || || |||||||| |||| Sbjct 900 TGACCGCTGCCGTCAGCACCCCCGCTAACAGTTTGGGGCACTCCCTACTGTTCCTGTGGG 841 Query 173189 GACCTGAAGCACAAGGTTCATTCGTACGTTGGTTACAACTCGGAGGACTATGGAACTTTG 173248 | || ||||| || | || || |||| ||| | || || ||||| |||| Sbjct 840 GTCCCGAAGCTCAGTGGGACTTTACCCGCTGGTGCCAATTAGGGGGTTTATGGGCTTTTG 781 Query 173249 TAGCATTACATGGAGTCTTTGGACTCATAGGTTTCATGCTCCGTCAGTTTGAGATCGCAG 173308 |||| | ||||||| || | ||| || || ||| || |||||||| || ||||| Sbjct 780 TAGCCCTGCATGGAGCTTTCGCACTGATTGGGTTCTGCCTGCGTCAGTTGGAAATCGCCC 721 Query 173309 GACTTGTAGGCATCAGACCTTACAACGCACTCGCATTCTCTGCTGTTATCGCAGTCTTCA 173368 | | || ||||| | ||||| || || |||| ||| | | ||| || || ||| Sbjct 720 GGTTGGTTGGCATTCGTCCTTATAATGCGATCGCTTTCACCGGCCCTATTGCCGTGTTCG 661 Query 173369 CTAGCATCTTTTTAATCTACCCACTAGGGCAGCACAGTTGGTTCTTCGCACCTTCATTCG 173428 ||| | || ||||| ||||| | || || | |||||||| || || || | Sbjct 660 TGAGCGTATTCTTAATGTACCCCTTGGGTCAATCTGGATGGTTCTTTGCTCCCAGCTTTG 601 Query 173429 GTGTCGCAGCAATCTTTCGTTATATCTTATTCATACAAGGTTTCCACAACATTACATTGA 173488 |||| |||| ||||| || | |||| ||||| | ||||| ||||||||| || | | Sbjct 600 GTGTAGCAGGCATCTTCCGGTTTATCCTATTCTTCCAAGGATTCCACAACTGGACGCTCA 541 Query 173489 ATCCATTTCACATGATGGGTGTTGCAGGAATACTAGGTGGAGCATTACTATGTGCCATTC 173548 | || || ||||||||||| ||||| || || || ||||| || |||| ||||| |||| Sbjct 540 ACCCCTTCCACATGATGGGAGTTGCCGGCATCCTGGGTGGTGCGCTACTCTGTGCTATTC 481 Query 173549 A 173549 | Sbjct 480 A 480 >seq3816217 Length=329 Score = 214 bits (236), Expect = 2e-50 Identities = 195/246 (79%), Gaps = 0/246 (0%) Strand=Plus/Plus Query 172327 TTCCAAGCAGAGCATAACATTCTAATGCATCCTTTCCACATGGCAGGAGTAGCAGGAATG 172386 ||||||||||| || ||||| || ||||| || ||||| ||| ||||| || || | Sbjct 1 TTCCAAGCAGAACACAACATCCTGATGCACCCCTTCCATATGTTGGGAGTTGCTGGTGTA 60 Query 172387 TTTGGAGGATCTTTATTCTCAGCAATGCACGGTTCTTTAGTTACATCTTCTCTAATCAGA 172446 || || || |||| ||||| || |||||||||||||| || || ||||| | | | Sbjct 61 TTCGGTGGTGCTTTGTTCTCCGCGATGCACGGTTCTTTGGTAACTTCTTCCTTGGTGCGT 120 Query 172447 GAGACAACTGAAGCAGAATCACAGAACTACGGATACAAGTTCGGACAAGAAGAAGAAACA 172506 || || || ||| ||||| || |||||||| ||||| ||||| |||||||||||||| Sbjct 121 GAAACCACCGAAATCGAATCTCAAAACTACGGTTACAAATTCGGTCAAGAAGAAGAAACC 180 Query 172507 TACAACATAGTAGCAGCACACGGTTACTTTGGTCGTCTTATCTTCCAGTATGCTTCTTTC 172566 |||||||| || ||||| ||||||||||| ||||| || |||||||| |||||||||||| Sbjct 181 TACAACATTGTGGCAGCTCACGGTTACTTCGGTCGCCTGATCTTCCAATATGCTTCTTTC 240 Query 172567 AACAAC 172572 |||||| Sbjct 241 AACAAC 246 >seq3751544 Length=281 Score = 203 bits (224), Expect = 4e-47 Identities = 212/276 (77%), Gaps = 2/276 (1%) Strand=Plus/Plus Query 171829 TGGGTAACCTCAACTAACAACAGAATTTATGTTGGTTGGTTCGGTGTACTCATGATCCCA 171888 |||||||| || || |||||| | ||||||| || ||||||||||| || |||||||| Sbjct 7 TGGGTAACATCCACCAACAACCGCCTTTATGTAGGCTGGTTCGGTGTTCTGATGATCCCT 66 Query 171889 TGTTTGCTCACAGC-AGCAGCATGCTTCATCGTTGCATTCATTGCAGCACCTCCTGTCGA 171947 | || || || | || | |||| |||| | || || || || || || || || || Sbjct 67 ACCCTACTAACTGCTACCATC-TGCTACATCATCGCTTTTATCGCTGCTCCCCCCGTGGA 125 Query 171948 TATCGACGGAATCAGAGAACCAGTTGCGGGTTCTTTCTTATATGGTAACAACATCATCTC 172007 || ||||| ||| | ||||| || || |||||| | || || || |||||||||||||| Sbjct 126 CATTGACGGTATCCGCGAACCCGTAGCTGGTTCTCTGTTGTACGGCAACAACATCATCTC 185 Query 172008 TGGTGCAGTTGTTCCATCATCAAACGCAATAGGTCTCCACTTCTACCCTATCTGGGAAGC 172067 |||||| |||||||| || || || || || ||||| ||||||||||| || |||||||| Sbjct 186 TGGTGCGGTTGTTCCTTCCTCCAATGCGATCGGTCTGCACTTCTACCCCATTTGGGAAGC 245 Query 172068 AGCAACCGTAGATGAATGGTTGTACAATGGTGGTCC 172103 ||| | | | ||||||||| | ||||| ||||| || Sbjct 246 AGCCAGCTTGGATGAATGGCTCTACAACGGTGGCCC 281 >seq958281 Length=3594 Score = 132 bits (146), Expect = 5e-26 Identities = 344/524 (66%), Gaps = 8/524 (2%) Strand=Plus/Minus Query 159260 AGAAATGGTTATGTGATATCACAGGGTTTGATTCTATATCATTACAACCTAACGCAGGAT 159319 || ||||||| || || || || |||| | || || |||| ||||| ||||| | Sbjct 1613 AGGAATGGTTGGCAGAAATTACCGGATTTGCTGGCATTTCTCTACAGCCTAATGCAGGTT 1554 Query 159320 CACAGGGTGAGTATGCAGGACTGTTAGCAATCCAAGCATACCATCAAGGATCAGGAGATG 159379 | || || || ||||| || | |||||||| | | || |||||| | |||||| Sbjct 1553 CTCAAGGGGAATATGCTGGTTTATTAGCAATTCGTGGTTATCATCAAAGCCGAGGAGAAA 1494 Query 159380 ATAAAAGAAATGTATGTTTGATACCAGAGTCAGCACATGGAACTAATCCTGCATCAGCAG 159439 || || | || | ||| | || || || || ||||| || |||||||| || || | Sbjct 1493 ATCAACGCCATATTTGTCTAATTCCTGAATCTGCACACGGTACTAATCCCGCTAGTGCCG 1434 Query 159440 TGATGGCAGGGATGAAAGTTGTAGGTGTCAAGTGTGATGATGATGGCAACATAGACATCA 159499 | ||| || |||||||||||| ||| || ||||| | || || || || || Sbjct 1433 TTATGTGTGGCATGAAAGTTGTACCTGTTAAATGTGACAGCCAGGGTAATATTGATATTG 1374 Query 159500 AAGATCTAGAGAAGAAAGCA----ATCATGAATACATTTGAACTGTCATGTATTATGATT 159555 | ||| | || | ||||| | ||| || || |||| | | | ||| | Sbjct 1373 ATGATTTGCAGCAAAAAGCTGAACAGCATCAAGACC----AACTCGCTGCTTTGATGGTA 1318 Query 159556 ACATATCCATCTACACATGGTGTATTTGAAACAAACATCAGACAGATATGTAAGATTGTT 159615 || ||||| || || ||||| || |||||| || | || || ||| | || | Sbjct 1317 ACTTATCCCTCCACTCATGGCGTGTTTGAAGACGGTATTCGCCATATTTGTGACATCATC 1258 Query 159616 CATGAGAATGGTGGTCAGGTATATCTTGATGGTGCAAATCTAAATGCACAGGTAGGTCTA 159675 || || |||||||| ||| | |||||||| ||| | |||||||||||||| || Sbjct 1257 CACCGCTGCGGGGGTCAGGTTTATATGGATGGTGCTAATATGAATGCACAGGTAGGGTTA 1198 Query 159676 GCAAAACCATGTGACTATGGTGCAGATGTATGTCATCTAAACTTACATAAGACATTCTGT 159735 || | || | ||| || ||||| || || || || || || || || |||||| Sbjct 1197 TGTCGTCCCGGAGATTTTGGCGCTGATGTCTGCCACCTGAATTTGCACAAAACTTTCTGT 1138 Query 159736 ATTCCACATGGAGGTGGAGGTCCTGGCGTAGGTCCTATTGGTGT 159779 || || || || || || ||||| || | ||||| ||||| || Sbjct 1137 ATACCCCACGGCGGCGGGGGTCCGGGAATGGGTCCCATTGGGGT 1094 Score = 84.2 bits (92), Expect = 2e-11 Identities = 87/114 (76%), Gaps = 0/114 (0%) Strand=Plus/Minus Query 160039 GAAGATATAGCAAAGAGACTTATGGACTATGGATTCCATGCACCTACACTATCGTGGCCT 160098 || ||||| || || |||| ||||| || || ||||| || ||||| | || ||||| Sbjct 783 GATGATATCGCTAAACGACTCATGGATTACGGTTTCCACGCCCCTACTATTTCTTGGCCA 724 Query 160099 GTGTTAGGAACTATGATGGTAGAACCAACAGAGTCTGAGTCACTTGATGAGTTG 160152 ||| || ||||||||||| ||||| ||||| |||||| || ||||||||| Sbjct 723 GTGGCGGGGACTATGATGGTGGAACCTACAGAAAGTGAGTCTCTCGATGAGTTG 670 >seq3654882 Length=237 Score = 129 bits (142), Expect = 7e-25 Identities = 157/214 (73%), Gaps = 0/214 (0%) Strand=Plus/Minus Query 173620 ACTTTCAGAGCATTTGATCCTACACAGGAAGAAGAAACTTATAGTATGATTACAGCGAAC 173679 || ||| |||| ||||| || || || | |||||||| ||| ||| | ||||| ||| Sbjct 214 ACCTTCCGAGCCTTTGAACCGACCCAAGCGGAAGAAACCTATTCCATGGTGACAGCCAAC 155 Query 173680 AGATTCTGGTCACAGATATTTGGTATCGCATTTTCAAACAAAAGATTTTTACACTTCCTC 173739 | || ||||| || || || ||||| || |||||||||||| | | ||||||||| || Sbjct 154 CGCTTTTGGTCTCAAATTTTCGGTATTGCTTTTTCAAACAAACGTTGGTTACACTTCTTC 95 Query 173740 ATGTTGTTCGTACCTGTCATGGGTATGTGGACATCATCCATAGGTATCGTAGGTCTTGCA 173799 ||| ||||||| || || | ||| |||||| | ||||| ||| | || ||||| || Sbjct 94 ATGCTGTTCGTTCCCGTAACAGGTCTGTGGATGTGTTCCATCGGTGTAGTGGGTCTAGCT 35 Query 173800 CTTAACCTTAGAGCATACGACTTTGTATCTCAAG 173833 | ||||| | || || ||||| || || |||| Sbjct 34 GTAAACCTGCGTGCTTATGACTTCGTGTCACAAG 1 >seq658184 Length=760 Score = 113 bits (124), Expect = 5e-20 Identities = 112/145 (77%), Gaps = 0/145 (0%) Strand=Plus/Minus Query 172949 GGTTTGATGTTCTTGACGACTGGTTAAAGAGAGATCGTTTCGTATTCATCGGATGGTCTG 173008 |||||||||| || || |||||| | ||| | ||||| || |||||| | |||||||||| Sbjct 162 GGTTTGATGTCCTCGATGACTGGCTGAAGCGTGATCGCTTTGTATTCGTAGGATGGTCTG 103 Query 173009 GTCTTTTACTTCTACCTTGTGCTTACCTTTCTATCGGTGGTTGGTTCTTAGGAACTACCT 173068 || | | ||| | || ||||| || || |||||||| || ||| || |||||||||| Sbjct 102 GTATCCTGCTTTTCCCCTGTGCCTATCTATCTATCGGCGGATGGCTCACCGGAACTACCT 43 Query 173069 TCGTTACATCATGGTATACACATGG 173093 | ||||| || ||||| || || || Sbjct 42 TTGTTACCTCTTGGTACACTCACGG 18 >seq3509123 Length=199 Score = 109 bits (120), Expect = 6e-19 Identities = 116/153 (76%), Gaps = 0/153 (0%) Strand=Plus/Plus Query 172663 AACGGTTTCAACTTCAACCAATCAGTTGTAGATGCTAACGGTAAGATTGTTCCTACATGG 172722 ||||||||||||||||||||||| || | || | | |||| | | ||| || ||| Sbjct 1 AACGGTTTCAACTTCAACCAATCCGTAATGGACTCCAGCGGTCGGGTAGTTAACACCTGG 60 Query 172723 GGTGACGTTCTTAACAGAGCAAACCTAGGTATGGAAGTTATGCATGAAAGAAATGCACAC 172782 | ||| || | ||| | || ||||| ||||||||||| ||||| || | || || ||| Sbjct 61 GCTGATGTCATCAACCGCGCTAACCTGGGTATGGAAGTAATGCACGAGCGCAACGCTCAC 120 Query 172783 AACTTCCCATTAGACCTTGCTTCTGCAGAGTCT 172815 |||||||| ||||| | |||||||| |||||| Sbjct 121 AACTTCCCCTTAGATTTAGCTTCTGCTGAGTCT 153 >seq2226574 Length=116 Score = 93.3 bits (102), Expect = 5e-14 Identities = 90/116 (78%), Gaps = 0/116 (0%) Strand=Plus/Plus Query 173466 AGGTTTCCACAACATTACATTGAATCCATTTCACATGATGGGTGTTGCAGGAATACTAGG 173525 ||| ||||||||| || | || || || ||||||||||| ||||| ||||| || || Sbjct 1 AGGATTCCACAACTGGACTCTAAACCCCTTCCACATGATGGGAGTTGCGGGAATCCTCGG 60 Query 173526 TGGAGCATTACTATGTGCCATTCATGGTGCAACAGTGCAGAACACATTGTATGAAG 173581 || || |||||||||| ||||||||||| ||||| | ||||| ||| ||||| Sbjct 61 CGGTGCGCTACTATGTGCTATTCATGGTGCTACAGTAGAAAACACCCTGTTTGAAG 116 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 558881787599520