Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ophionereis_20fasciata_20[genbank_20GCA_5F900067615.1_202017-02-27] 3,968,282 sequences; 1,184,528,790 total letters Query= NC_015285.1 Length=174285 Score E Sequences producing significant alignments: (Bits) Value seq577692 435 3e-117 seq856283 356 2e-93 seq3816217 333 3e-86 seq3751544 260 1e-64 seq3172301 118 1e-21 seq658184 118 1e-21 seq3509123 109 6e-19 seq2226574 105 7e-18 >seq577692 Length=2825 Score = 435 bits (482), Expect = 3e-117 Identities = 512/690 (74%), Gaps = 2/690 (0%) Strand=Plus/Plus Query 162394 TGGGTAACTTCTACCAATAACCGCCTCTATGTCGGTTGGTTCGGCGTACTGATGATTCCA 162453 |||||||| ||||||||||||||||| ||||| |||||||| || | ||||||| || Sbjct 183 TGGGTAACATCTACCAATAACCGCCTTTATGTAGGTTGGTTTGGTATTGTGATGATCCCT 242 Query 162454 ACTCTGTTGGCAGCAACCATCTGTTTCATCGTCGCCTTCGTCGCTGCTCCCCCTGTGGAC 162513 || || | | || ||||||||||| | | || || || ||||| || |||||||| Sbjct 243 ACCTTGCTAACTGCCACCATCTGTTTTGTGTTAGCTTTTGTAGCTGCACCTCCTGTGGAT 302 Query 162514 ATCGACGGCATCCGTGAACCCGTCGCTGGTTCACTCATGTATGGTAACAACATCATCTCT 162573 || ||||||||||| |||||||| | ||||| || |||| || || ||||||||| | Sbjct 303 ATTGACGGCATCCGCGAACCCGTTTCCGGTTCTCTGTTGTACGGCAATAACATCATCACC 362 Query 162574 GGTGCAGTTGTTCCATCTTCCAACGCAATTGGTCTTCACTTCTATCCCATCTGGGAAGCC 162633 | || ||||| || ||| || || ||||| | ||||| ||||||||||||||||| Sbjct 363 GCCGCTGTTGTACCCAGTTCTAATGCGATTGGGTTGCACTTTTATCCCATCTGGGAAGCG 422 Query 162634 GCATCACTTGATGAGTGGCTGTATAACGGTGGTCCTTTCCAACTCGTAGTATTCCACTTC 162693 ||| ||||||| ||||| |||||||| || || | ||| | | || ||||||||| Sbjct 423 GCAAATATTGATGAATGGCTTTATAACGGCGGCCCCTACCAGTTGATTGTTTTCCACTTC 482 Query 162694 CTGATCGGCATCTATGCCTACATGGGACGTGAATGGGAACTCTCTTACCGTCTTGGTATG 162753 || |||||||| | | ||| ||||| ||||| |||||||| ||||| || | || ||| Sbjct 483 CTAATCGGCATTTTTTGCTATATGGGTCGTGAGTGGGAACTGTCTTATCGGTTAGGAATG 542 Query 162754 CGTCCATGGATCTGC-GTAGCATACTCTGCACCTGTTGCAGCAGCATCGGCAGTCTTCCT 162812 ||||| ||||| ||| || || || || ||||| || || || |||| || | | Sbjct 543 CGTCCTTGGAT-TGCTGTTGCTTATAGCGCTCCTGTAGCTGCTGCGACGGCGGTACTGTT 601 Query 162813 GGTCTATCCTTTCGGTCAAGGTTCTTTCTCTGACGCAATGCCCTTGGGTATCAGTGGTAC 162872 || ||| || |||||||||||||||| ||||| | | || |||| || ||| || Sbjct 602 AGTTTATTCTATCGGTCAAGGTTCTTTTTCTGATGGTTTACCGCTGGGGATTTCTGGCAC 661 Query 162873 ATTCAACTACATGCTTGTCTTCCAAGCAGAGCACAACATTCTGATGCATCCCTTCCACAT 162932 ||| |||| ||| | || | ||||||||||| || || | ||||| |||||||| || Sbjct 662 ATTTAACTTTATGTTAGTGCTGCAAGCAGAGCATAATGTTTTAATGCACCCCTTCCATAT 721 Query 162933 GTTGGGTGTCGCAGGTGTCTTCGGTGGTTCACTGTTCAGTGCAATGCACGGTTCTTTGGT 162992 | |||| || || |||||||| ||||| | || ||| || |||||||||||| |||| Sbjct 722 GCTGGGAGTAGCTGGTGTCTTTGGTGGCGCTCTTTTCTCAGCTATGCACGGTTCTCTGGT 781 Query 162993 TACATCTTCACTCGTCCGTGAGACGACTGAAACTGAGTCACAGAACTATGGTTACAAGTT 163052 |||||||| | || ||||| || ||||||| ||| || ||| ||||| || Sbjct 782 GACATCTTCTTTAGTACGTGAAACCACTGAAATTGAAAGCCAAAACCGGGGTTATCGCTT 841 Query 163053 CGGTCAAGAAGAAGAGACATACAACATCGT 163082 || ||||||||||| || || ||||| || Sbjct 842 TGGACAAGAAGAAGAAACTTATAACATTGT 871 >seq856283 Length=1080 Score = 356 bits (394), Expect = 2e-93 Identities = 440/602 (73%), Gaps = 0/602 (0%) Strand=Plus/Minus Query 163619 GGTTTGATGTCCTGGATGACTGGCTTAAGCGCGATCGTTTCGTATTTATTGGTTGGTCTG 163678 ||||||||||||| ||||||||||| ||||||||||| ||||||||| | || ||||| | Sbjct 1080 GGTTTGATGTCCTCGATGACTGGCTGAAGCGCGATCGGTTCGTATTTGTGGGATGGTCGG 1021 Query 163679 GATTACTACTTCTTCCCACTGCTTATATGGCAATTGGTGGCTGGCTTACTGGTACAACTT 163738 | | || ||| | ||| || ||| | | || || || ||| | || || || || | Sbjct 1020 GTATCCTGCTTTTCCCCTGCGCCTATCTATCTATCGGGGGATGGTTGACAGGAACCACCT 961 Query 163739 TCGTTACGTCGTGGTACACCCATGGACTGGCAACTTCCTATCTTGAGGGTGCTAATTTTC 163798 | ||||| || ||||||||||| ||||| || | |||||| || || ||| || |||| Sbjct 960 TTGTTACCTCTTGGTACACCCACGGACTCGCCAGTTCCTACCTAGAAGGTTGCAACTTTC 901 Query 163799 TCACAGCGGCTGTGTCAACGCCTGCTGACGCTATGGGTCATTCTCTTCTTCTTCTCTGGG 163858 | || || || || || || ||| || | |||| || || || || | || |||| Sbjct 900 TGACCGCTGCCGTCAGCACCCCCGCTAACAGTTTGGGGCACTCCCTACTGTTCCTGTGGG 841 Query 163859 GTCCTGAGGCTCAGGGCGATTTCGTCCGCTGGATCCAACTTGGGGGACTCTGGAATTTTG 163918 |||| || |||||| | || || ||||||| |||| | ||||| | ||| ||||| Sbjct 840 GTCCCGAAGCTCAGTGGGACTTTACCCGCTGGTGCCAATTAGGGGGTTTATGGGCTTTTG 781 Query 163919 TGGCACTCCACGGAGCCTTTGCTCTCATTGGTTTCATGCTTCGGCAATTTGAACTTGCTC 163978 | || || || ||||| || || || ||||| ||| || || || || ||| | || | Sbjct 780 TAGCCCTGCATGGAGCTTTCGCACTGATTGGGTTCTGCCTGCGTCAGTTGGAAATCGCCC 721 Query 163979 GCCTGATTGGAATCAGACCCTACAATGCGATTGCTTTCTCTGGTCCTATTGCTGTCTTCG 164038 | || |||| || | || || |||||||| |||||| | || |||||||| || |||| Sbjct 720 GGTTGGTTGGCATTCGTCCTTATAATGCGATCGCTTTCACCGGCCCTATTGCCGTGTTCG 661 Query 164039 TTAGTGTCTTTCTCATCTACCCTCTGGGTCAATCAAGTTGGTTCTTCGCTCCATCTTTTG 164098 | || || || | || ||||| |||||||||| | |||||||| ||||| |||| Sbjct 660 TGAGCGTATTCTTAATGTACCCCTTGGGTCAATCTGGATGGTTCTTTGCTCCCAGCTTTG 601 Query 164099 GAGTGGCAGCAATCTTCAGATTCCTCTTATTCCTTCAAGGATTTCATAACTGGACTTTGA 164158 | || |||| |||||| | || || ||||| | |||||||| || |||||||| | | Sbjct 600 GTGTAGCAGGCATCTTCCGGTTTATCCTATTCTTCCAAGGATTCCACAACTGGACGCTCA 541 Query 164159 ACCCCTTCCATATGATGGGAGTTGCTGGTATACTAGGCGGAGCATTGCTATCTGCTATTC 164218 |||||||||| |||||||||||||| || || || || || || | || | |||||||| Sbjct 540 ACCCCTTCCACATGATGGGAGTTGCCGGCATCCTGGGTGGTGCGCTACTCTGTGCTATTC 481 Query 164219 AC 164220 || Sbjct 480 AC 479 Score = 123 bits (136), Expect = 3e-23 Identities = 131/173 (76%), Gaps = 0/173 (0%) Strand=Plus/Minus Query 164247 TGAAGATGGAGAACAAGCAAACACCTTTAAGGCGTTTGATTCGACACAGGAAGAAGAGAC 164306 |||||| |||||| | | |||||||| || ||||| | || || | ||||| || Sbjct 420 TGAAGACGGAGAAGGATCTAACACCTTCCGTGCTTTTGAACCCACCCAAGCCGAAGAAAC 361 Query 164307 TTATTCTATGGTCACTGCAAACCGCTTCTGGTCGCAGATCTTCGGTGTTGCGTTTTCTAA 164366 || || ||||| || || |||||||||||||| ||||| |||||| |||| ||||| || Sbjct 360 CTACTCCATGGTGACAGCTAACCGCTTCTGGTCCCAGATTTTCGGTATTGCTTTTTCCAA 301 Query 164367 CAAGCGGTGGCTTCATTTTTTCATGTTGTTTGTGCCTGTTATGGGTCTATGGA 164419 ||| || ||| | || || |||||| ||||||| ||||| | || || |||| Sbjct 300 CAAACGCTGGTTACACTTCTTCATGCTGTTTGTTCCTGTAACAGGGCTGTGGA 248 >seq3816217 Length=329 Score = 333 bits (368), Expect = 3e-86 Identities = 271/329 (82%), Gaps = 0/329 (0%) Strand=Plus/Plus Query 162892 TTCCAAGCAGAGCACAACATTCTGATGCATCCCTTCCACATGTTGGGTGTCGCAGGTGTC 162951 ||||||||||| |||||||| |||||||| |||||||| |||||||| || || ||||| Sbjct 1 TTCCAAGCAGAACACAACATCCTGATGCACCCCTTCCATATGTTGGGAGTTGCTGGTGTA 60 Query 162952 TTCGGTGGTTCACTGTTCAGTGCAATGCACGGTTCTTTGGTTACATCTTCACTCGTCCGT 163011 ||||||||| | ||||| || ||||||||||||||||| || ||||| | || ||| Sbjct 61 TTCGGTGGTGCTTTGTTCTCCGCGATGCACGGTTCTTTGGTAACTTCTTCCTTGGTGCGT 120 Query 163012 GAGACGACTGAAACTGAGTCACAGAACTATGGTTACAAGTTCGGTCAAGAAGAAGAGACA 163071 || || || |||| || || || ||||| |||||||| ||||||||||||||||| || Sbjct 121 GAAACCACCGAAATCGAATCTCAAAACTACGGTTACAAATTCGGTCAAGAAGAAGAAACC 180 Query 163072 TACAACATCGTCGCAGCCCATGGTTACTTCGGTCGTTTGATCTTCCAATATGCATCATTC 163131 |||||||| || ||||| || |||||||||||||| |||||||||||||||| || ||| Sbjct 181 TACAACATTGTGGCAGCTCACGGTTACTTCGGTCGCCTGATCTTCCAATATGCTTCTTTC 240 Query 163132 AACAACTCCCGTTCCTTGCACTTCTTCCTTGCTGCATGGCCTGTTGTCGGCATCTGGTTC 163191 |||||| ||||||| ||||||||||| | | ||| ||||| || |||||||||||||| Sbjct 241 AACAACAGCCGTTCCCTGCACTTCTTCTTGGGTGCTTGGCCGGTAATCGGCATCTGGTTC 300 Query 163192 ACCGCCCTTGGCGTGTCAACCATGGCATT 163220 ||||| | || || || |||||||| || Sbjct 301 ACCGCTTTAGGTGTATCCACCATGGCCTT 329 >seq3751544 Length=281 Score = 260 bits (288), Expect = 1e-64 Identities = 226/277 (82%), Gaps = 4/277 (1%) Strand=Plus/Plus Query 162394 TGGGTAACTTCTACCAATAACCGCCTCTATGTCGGTTGGTTCGGCGTACTGATGATTCCA 162453 |||||||| || ||||| |||||||| ||||| || |||||||| || |||||||| || Sbjct 7 TGGGTAACATCCACCAACAACCGCCTTTATGTAGGCTGGTTCGGTGTTCTGATGATCCCT 66 Query 162454 ACTCTGTTGGCAGCAACCATCTGTTTCATCGTCGCCTTCGTCGCTGCTCCCCCTGTGGAC 162513 || || | | || |||||||| | |||| |||| || ||||||||||||| |||||| Sbjct 67 ACCCTACTAACTGCTACCATCTGCTACATCATCGCTTTTATCGCTGCTCCCCCCGTGGAC 126 Query 162514 ATCGACGGCATCCGTGAACCCGTCGCTGGTTCACTCATGTATGGTAACAACATCATCTCT 162573 || ||||| ||||| |||||||| |||||||| || |||| || ||||||||||||||| Sbjct 127 ATTGACGGTATCCGCGAACCCGTAGCTGGTTCTCTGTTGTACGGCAACAACATCATCTCT 186 Query 162574 GGTGCAGTTGTTCCATCTTCCAACGCAATTGGTCTTCACTTCTATCCCATCTGGGAAGCC 162633 ||||| |||||||| || ||||| || || ||||| |||||||| ||||| |||||||| Sbjct 187 GGTGCGGTTGTTCCTTCCTCCAATGCGATCGGTCTGCACTTCTACCCCATTTGGGAAGCA 246 Query 162634 GCATCA-CTT-GATGAGTGGCTGTATAACGGTGGTCC 162668 || || ||| ||||| ||||| || |||||||| || Sbjct 247 GC--CAGCTTGGATGAATGGCTCTACAACGGTGGCCC 281 >seq3172301 Length=157 Score = 118 bits (130), Expect = 1e-21 Identities = 116/150 (77%), Gaps = 0/150 (0%) Strand=Plus/Minus Query 162736 TCTTACCGTCTTGGTATGCGTCCATGGATCTGCGTAGCATACTCTGCACCTGTTGCAGCA 162795 || ||||| | || |||||||| |||||||||||||| ||| ||||||||||| || Sbjct 155 TCCTACCGCTTGGGAATGCGTCCTTGGATCTGCGTAGCTTACAGCGCACCTGTTGCGGCT 96 Query 162796 GCATCGGCAGTCTTCCTGGTCTATCCTTTCGGTCAAGGTTCTTTCTCTGACGCAATGCCC 162855 || ||||| ||| || |||| || |||| |||||||||||||| |||| ||||| Sbjct 95 GCTAGTGCAGTATTCTTGATCTACCCCATCGGACAAGGTTCTTTCTCCGACGGTATGCCT 36 Query 162856 TTGGGTATCAGTGGTACATTCAACTACATG 162885 |||||||| || || ||||||| |||| Sbjct 35 CTGGGTATCTCCGGAACTTTCAACTTCATG 6 >seq658184 Length=760 Score = 118 bits (130), Expect = 1e-21 Identities = 122/160 (76%), Gaps = 0/160 (0%) Strand=Plus/Minus Query 163619 GGTTTGATGTCCTGGATGACTGGCTTAAGCGCGATCGTTTCGTATTTATTGGTTGGTCTG 163678 ||||||||||||| ||||||||||| ||||| ||||| || ||||| | || ||||||| Sbjct 162 GGTTTGATGTCCTCGATGACTGGCTGAAGCGTGATCGCTTTGTATTCGTAGGATGGTCTG 103 Query 163679 GATTACTACTTCTTCCCACTGCTTATATGGCAATTGGTGGCTGGCTTACTGGTACAACTT 163738 | | || ||| | ||| ||| ||| | | || || || ||||| || || || || | Sbjct 102 GTATCCTGCTTTTCCCCTGTGCCTATCTATCTATCGGCGGATGGCTCACCGGAACTACCT 43 Query 163739 TCGTTACGTCGTGGTACACCCATGGACTGGCAACTTCCTA 163778 | ||||| || |||||||| || ||||| || | |||||| Sbjct 42 TTGTTACCTCTTGGTACACTCACGGACTCGCCAGTTCCTA 3 >seq3509123 Length=199 Score = 109 bits (120), Expect = 6e-19 Identities = 127/169 (75%), Gaps = 8/169 (5%) Strand=Plus/Plus Query 163228 AACGGTTTCAACTTCAACCAGTCCATCCTTGATGGTC---AG-GGTCGTGTGTTGAACAC 163283 |||||||||||||||||||| |||| | |||| | || ||||| || | ||||| Sbjct 1 AACGGTTTCAACTTCAACCA----ATCCGTAATGGACTCCAGCGGTCGGGTAGTTAACAC 56 Query 163284 CTGGGCAGACGTTCTGAACCGTGCAGGTTTGGGTATGGAAGTTATGCACGAGCGCAATGC 163343 |||||| || || | ||||| || ||||||||||||| |||||||||||||| || Sbjct 57 CTGGGCTGATGTCATCAACCGCGCTAACCTGGGTATGGAAGTAATGCACGAGCGCAACGC 116 Query 163344 TCACAACTTCCCACTTGACCTGGCAGCTGCCGAGTCAACTCCTGTTGCT 163392 |||||||||||| | || | || |||| ||||| ||||| ||| Sbjct 117 TCACAACTTCCCCTTAGATTTAGCTTCTGCTGAGTCTGAGCCTGTAGCT 165 >seq2226574 Length=116 Score = 105 bits (116), Expect = 7e-18 Identities = 93/116 (80%), Gaps = 0/116 (0%) Strand=Plus/Plus Query 164136 AGGATTTCATAACTGGACTTTGAACCCCTTCCATATGATGGGAGTTGCTGGTATACTAGG 164195 |||||| || ||||||||| | ||||||||||| |||||||||||||| || || || || Sbjct 1 AGGATTCCACAACTGGACTCTAAACCCCTTCCACATGATGGGAGTTGCGGGAATCCTCGG 60 Query 164196 CGGAGCATTGCTATCTGCTATTCACGGAGTCACAGTTGAAAATACATTGTATGAAG 164251 ||| || | |||| ||||||||| || | ||||| ||||| || ||| ||||| Sbjct 61 CGGTGCGCTACTATGTGCTATTCATGGTGCTACAGTAGAAAACACCCTGTTTGAAG 116 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 529925868116400