Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ophionereis_20fasciata_20[genbank_20GCA_5F900067615.1_202017-02-27] 3,968,282 sequences; 1,184,528,790 total letters Query= NC_015287.1 Length=232878 Score E Sequences producing significant alignments: (Bits) Value seq577692 385 7e-102 seq3816217 239 6e-58 seq3751544 190 3e-43 seq3172301 118 2e-21 seq3509123 113 6e-20 >seq577692 Length=2825 Score = 385 bits (426), Expect = 7e-102 Identities = 514/709 (72%), Gaps = 4/709 (1%) Strand=Plus/Plus Query 215285 TGGGACGAGTTTTGTGAGTGGGTTACTTCTACTGACAATCGTATCTACGTTGGTTGGTTT 215344 ||||| ||||||| ||||| || ||||| | || || | || || ||||||||| Sbjct 165 TGGGAACAGTTTTGCACTTGGGTAACATCTACCAATAACCGCCTTTATGTAGGTTGGTTT 224 Query 215345 GGTGTCCTCATGATTCCTTGCCTCCTCGCAGCTACCACTTGTTTCATCGTAGCATTCATC 215404 ||| | | ||||| ||| | | || | || |||| ||||| | |||| || | Sbjct 225 GGTATTGTGATGATCCCTACCTTGCTAACTGCCACCATCTGTTTTGTGTTAGCTTTTGTA 284 Query 215405 GCTGCACCTCCTGTCGATATCGACGGAATCAGAGAGCCAGTTGCTGGTTCTTTAATGTAT 215464 |||||||||||||| ||||| ||||| ||| | || || ||| | |||||| | |||| Sbjct 285 GCTGCACCTCCTGTGGATATTGACGGCATCCGCGAACCCGTTTCCGGTTCTCTGTTGTAC 344 Query 215465 GGTAACAACATCATCTCTGGTGCTGTTGTACCTAGTTCAAACGCAATCGGATTACACTTC 215524 || || ||||||||| | | ||||||||||| ||||| || || || || || ||||| Sbjct 345 GGCAATAACATCATCACCGCCGCTGTTGTACCCAGTTCTAATGCGATTGGGTTGCACTTT 404 Query 215525 TACCCTATCTGGGAAGCAGCAACAGTTGACGAATGGCTCTACAATGGTGGACCTTTCCAA 215584 || || ||||||||||| |||| |||| |||||||| || || || || || | ||| Sbjct 405 TATCCCATCTGGGAAGCGGCAAATATTGATGAATGGCTTTATAACGGCGGCCCCTACCAG 464 Query 215585 CTGGTTATCTTCCACTTCCTCATTGGTATTTCT-GC-ATACTGCGGAAGACAGTGGGAAC 215642 || || | ||||||||||| || || |||| | || ||| || || | ||||||||| Sbjct 465 TTGATTGTTTTCCACTTCCTAATCGGCATTTTTTGCTATA-TG-GGTCGTGAGTGGGAAC 522 Query 215643 TTTCTTACAGATTAGGTATGAGACCTTGGATCTGTGTTGCTTACTCCGCACCTGTATCTG 215702 | ||||| | ||||| ||| | |||||||| ||||||||| ||| |||||| ||| Sbjct 523 TGTCTTATCGGTTAGGAATGCGTCCTTGGATTGCTGTTGCTTATAGCGCTCCTGTAGCTG 582 Query 215703 CTGCCTTTGCAGTATTCCTTGTGTATCCATTCGGTCAGGGTTCTTTCTCTGATGCTATGC 215762 |||| || ||| | | || ||| | ||||||| |||||||| ||||||| | | | Sbjct 583 CTGCGACGGCGGTACTGTTAGTTTATTCTATCGGTCAAGGTTCTTTTTCTGATGGTTTAC 642 Query 215763 CACTTGGAATCTCTGGAACATTCAACTACATGTTTGTTTTCCAGGCTGAGCACAACATTC 215822 | || || || ||||| ||||| |||| ||||| || | || || ||||| || || Sbjct 643 CGCTGGGGATTTCTGGCACATTTAACTTTATGTTAGTGCTGCAAGCAGAGCATAATGTTT 702 Query 215823 TGATGCACCCATTCCACATGTTAGGTGTGGCTGGTGTCTTCGGTGGTTCATTGTTCTCTG 215882 | |||||||| ||||| ||| | || || ||||||||||| ||||| | | ||||| | Sbjct 703 TAATGCACCCCTTCCATATGCTGGGAGTAGCTGGTGTCTTTGGTGGCGCTCTTTTCTCAG 762 Query 215883 CAATGCACGGTTCACTTGTTACATCTTCTCTAATCAGAGAGACAACTGAGCAAGAATCTC 215942 | ||||||||||| || || ||||||||| || | | || || ||||| ||| | Sbjct 763 CTATGCACGGTTCTCTGGTGACATCTTCTTTAGTACGTGAAACCACTGAAATTGAAAGCC 822 Query 215943 AGAACTACGGTTACAAGTTCGGACAAGAGGAGGAAACATACAACATCGT 215991 | ||| ||||| || |||||||| || ||||| || ||||| || Sbjct 823 AAAACCGGGGTTATCGCTTTGGACAAGAAGAAGAAACTTATAACATTGT 871 >seq3816217 Length=329 Score = 239 bits (264), Expect = 6e-58 Identities = 253/332 (76%), Gaps = 6/332 (2%) Strand=Plus/Plus Query 215801 TTCCAGGCTGAGCACAACATTCTGATGCACCCATTCCACATGTTAGGTGTGGCTGGTGTC 215860 ||||| || || |||||||| ||||||||||| ||||| ||||| || || |||||||| Sbjct 1 TTCCAAGCAGAACACAACATCCTGATGCACCCCTTCCATATGTTGGGAGTTGCTGGTGTA 60 Query 215861 TTCGGTGGTTCATTGTTCTCTGCAATGCACGGTTCACTTGTTACATCTTCTCTAATCAGA 215920 ||||||||| | |||||||| || ||||||||||| | || || ||||| | | | Sbjct 61 TTCGGTGGTGCTTTGTTCTCCGCGATGCACGGTTCTTTGGTAACTTCTTCCTTGGTGCGT 120 Query 215921 GAGACAACTGAGCAAGAATCTCAGAACTACGGTTACAAGTTCGGACAAGAGGAGGAAACA 215980 || || || || |||||||| |||||||||||||| ||||| ||||| || ||||| Sbjct 121 GAAACCACCGAAATCGAATCTCAAAACTACGGTTACAAATTCGGTCAAGAAGAAGAAACC 180 Query 215981 TACAACATCGTAGCTGCACACGGTTACTTTGGTCGCCTCATCTTCCAATACGCATCTTTC 216040 |||||||| || || || ||||||||||| |||||||| ||||||||||| || |||||| Sbjct 181 TACAACATTGTGGCAGCTCACGGTTACTTCGGTCGCCTGATCTTCCAATATGCTTCTTTC 240 Query 216041 AACAACTCAAGAAGT---CTTCACTTCTTCCTTGCAGCATTCCCTGTTATTTGTATCTGG 216097 |||||| || || || ||||||||| | | || | || || || | |||||| Sbjct 241 AACAAC---AGCCGTTCCCTGCACTTCTTCTTGGGTGCTTGGCCGGTAATCGGCATCTGG 297 Query 216098 GCAACTGCAATGGGTGTCTCAACTATGGCGTT 216129 || || | ||||| || || ||||| || Sbjct 298 TTCACCGCTTTAGGTGTATCCACCATGGCCTT 329 >seq3751544 Length=281 Score = 190 bits (210), Expect = 3e-43 Identities = 207/275 (75%), Gaps = 0/275 (0%) Strand=Plus/Plus Query 215303 TGGGTTACTTCTACTGACAATCGTATCTACGTTGGTTGGTTTGGTGTCCTCATGATTCCT 215362 ||||| || || || |||| || | || || || ||||| ||||| || ||||| ||| Sbjct 7 TGGGTAACATCCACCAACAACCGCCTTTATGTAGGCTGGTTCGGTGTTCTGATGATCCCT 66 Query 215363 TGCCTCCTCGCAGCTACCACTTGTTTCATCGTAGCATTCATCGCTGCACCTCCTGTCGAT 215422 ||| || | ||||||| || | |||| | || || |||||||| || || || || Sbjct 67 ACCCTACTAACTGCTACCATCTGCTACATCATCGCTTTTATCGCTGCTCCCCCCGTGGAC 126 Query 215423 ATCGACGGAATCAGAGAGCCAGTTGCTGGTTCTTTAATGTATGGTAACAACATCATCTCT 215482 || ||||| ||| | || || || ||||||||| | |||| || ||||||||||||||| Sbjct 127 ATTGACGGTATCCGCGAACCCGTAGCTGGTTCTCTGTTGTACGGCAACAACATCATCTCT 186 Query 215483 GGTGCTGTTGTACCTAGTTCAAACGCAATCGGATTACACTTCTACCCTATCTGGGAAGCA 215542 ||||| ||||| ||| || || || ||||| | ||||||||||| || ||||||||| Sbjct 187 GGTGCGGTTGTTCCTTCCTCCAATGCGATCGGTCTGCACTTCTACCCCATTTGGGAAGCA 246 Query 215543 GCAACAGTTGACGAATGGCTCTACAATGGTGGACC 215577 || | | || |||||||||||||| ||||| || Sbjct 247 GCCAGCTTGGATGAATGGCTCTACAACGGTGGCCC 281 >seq3172301 Length=157 Score = 118 bits (130), Expect = 2e-21 Identities = 119/155 (77%), Gaps = 0/155 (0%) Strand=Plus/Minus Query 215645 TCTTACAGATTAGGTATGAGACCTTGGATCTGTGTTGCTTACTCCGCACCTGTATCTGCT 215704 || ||| | || || ||| | ||||||||||| || |||||| ||||||||| | ||| Sbjct 155 TCCTACCGCTTGGGAATGCGTCCTTGGATCTGCGTAGCTTACAGCGCACCTGTTGCGGCT 96 Query 215705 GCCTTTGCAGTATTCCTTGTGTATCCATTCGGTCAGGGTTCTTTCTCTGATGCTATGCCA 215764 || |||||||||| | | || || |||| || ||||||||||| || | |||||| Sbjct 95 GCTAGTGCAGTATTCTTGATCTACCCCATCGGACAAGGTTCTTTCTCCGACGGTATGCCT 36 Query 215765 CTTGGAATCTCTGGAACATTCAACTACATGTTTGT 215799 || || ||||| ||||| ||||||| |||||| || Sbjct 35 CTGGGTATCTCCGGAACTTTCAACTTCATGTTGGT 1 >seq3509123 Length=199 Score = 113 bits (124), Expect = 6e-20 Identities = 139/190 (73%), Gaps = 0/190 (0%) Strand=Plus/Plus Query 216137 AACGGTTTCAACTTCAACCAGTCTGTCGTAGACGCATCTGGTAAAGTTATTCCTACTTGG 216196 |||||||||||||||||||| || || | ||| | ||| || || || ||| Sbjct 1 AACGGTTTCAACTTCAACCAATCCGTAATGGACTCCAGCGGTCGGGTAGTTAACACCTGG 60 Query 216197 GCAGACGTTCTTAACAGAGCAGGACTTGGTATGGAAGTAATGCACGAGCGTAACGCTCAC 216256 || || || | ||| | || || ||||||||||||||||||||||| ||||||||| Sbjct 61 GCTGATGTCATCAACCGCGCTAACCTGGGTATGGAAGTAATGCACGAGCGCAACGCTCAC 120 Query 216257 AACTTCCCATTAGACTTGGCTGCTGCTGAATCAACACCAGTTGCTTTAACTGCACCTACT 216316 |||||||| ||||| || ||| ||||||| || || || ||||| ||||||| Sbjct 121 AACTTCCCCTTAGATTTAGCTTCTGCTGAGTCTGAGCCTGTAGCTTTGGTTGCACCTCAA 180 Query 216317 ATTGGATAAT 216326 || || |||| Sbjct 181 ATCGGCTAAT 190 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 708122926227360