Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ophionereis_20fasciata_20[genbank_20GCA_5F900067615.1_202017-02-27] 3,968,282 sequences; 1,184,528,790 total letters Query= NC_015288.1 Length=191195 Score E Sequences producing significant alignments: (Bits) Value seq577692 473 1e-128 seq856283 387 2e-102 seq3816217 300 2e-76 seq3751544 248 1e-60 seq3654882 136 5e-27 seq3509123 131 2e-25 seq2226574 113 5e-20 seq658184 113 5e-20 >seq577692 Length=2825 Score = 473 bits (524), Expect = 1e-128 Identities = 529/707 (75%), Gaps = 0/707 (0%) Strand=Plus/Plus Query 181785 TGGGAACAATTCTGCGAGTGGGTTACATCTACCAACAATCGTCTCTATGTCGGTTGGTTT 181844 |||||||| || ||| ||||| ||||||||||| || || || ||||| ||||||||| Sbjct 165 TGGGAACAGTTTTGCACTTGGGTAACATCTACCAATAACCGCCTTTATGTAGGTTGGTTT 224 Query 181845 GGTGTGCTGATGATCCCAACTCTGTTGGCGGCAACCATCTGTTTCATCGTTGCTTTCGTA 181904 ||| | |||||||||| || || | | || ||||||||||| | | ||||| ||| Sbjct 225 GGTATTGTGATGATCCCTACCTTGCTAACTGCCACCATCTGTTTTGTGTTAGCTTTTGTA 284 Query 181905 GCAGCACCTCCTGTCGATATCGACGGTATCCGCGAACCCGTAGCTGGTTCACTCATGTAT 181964 || ||||||||||| ||||| ||||| |||||||||||||| | ||||| || |||| Sbjct 285 GCTGCACCTCCTGTGGATATTGACGGCATCCGCGAACCCGTTTCCGGTTCTCTGTTGTAC 344 Query 181965 GGTAACAACATCATCTCTGGTGCTGTTGTCCCATCCTCCAACGCAATTGGTCTTCACTTC 182024 || || ||||||||| | | |||||||| || || || || ||||| | ||||| Sbjct 345 GGCAATAACATCATCACCGCCGCTGTTGTACCCAGTTCTAATGCGATTGGGTTGCACTTT 404 Query 182025 TACCCAATCTGGGAAGCTGCCTCACTTGATGAGTGGCTGTATAACGGTGGTCCTTTCCAA 182084 || || ||||||||||| || ||||||| ||||| |||||||| || || | ||| Sbjct 405 TATCCCATCTGGGAAGCGGCAAATATTGATGAATGGCTTTATAACGGCGGCCCCTACCAG 464 Query 182085 CTGGTTGTTTTCCACTTCCTGATCGGCATCTACGCCTACATGGGACGTGAGTGGGAACTT 182144 || |||||||||||||||| |||||||| | ||| ||||| |||||||||||||| Sbjct 465 TTGATTGTTTTCCACTTCCTAATCGGCATTTTTTGCTATATGGGTCGTGAGTGGGAACTG 524 Query 182145 TCTTACCGCTTAGGTATGCGTCCCTGGATCTGTGTAGCATACTCTGCTCCAGTCGCTGCA 182204 ||||| || ||||| |||||||| ||||| ||| || || ||||| || ||||| Sbjct 525 TCTTATCGGTTAGGAATGCGTCCTTGGATTGCTGTTGCTTATAGCGCTCCTGTAGCTGCT 584 Query 182205 GCATCTGCTGTATTCTTAGTCTATCCTTTCGGTCAAGGTTCGTTCTCCGATGCAATGCCC 182264 || | || ||| | ||||| ||| || ||||||||||||| || || |||| | || Sbjct 585 GCGACGGCGGTACTGTTAGTTTATTCTATCGGTCAAGGTTCTTTTTCTGATGGTTTACCG 644 Query 182265 CTCGGAATCTCAGGAACATTCAACTATATGTTGGTTTTCCAAGCTGAGCACAACATTCTT 182324 || || || || || ||||| |||| |||||| || | ||||| ||||| || || | Sbjct 645 CTGGGGATTTCTGGCACATTTAACTTTATGTTAGTGCTGCAAGCAGAGCATAATGTTTTA 704 Query 182325 ATGCATCCCTTCCACATGTTGGGTGTAGCAGGTGTATTCGGTGGTTCACTGTTTAGTGCA 182384 ||||| |||||||| ||| |||| ||||| ||||| || ||||| | || || || Sbjct 705 ATGCACCCCTTCCATATGCTGGGAGTAGCTGGTGTCTTTGGTGGCGCTCTTTTCTCAGCT 764 Query 182385 ATGCACGGTTCTTTGGTTACATCTTCACTCGTCCGTGAGACGACTGAGCAAGAGTCACAG 182444 |||||||||||| |||| |||||||| | || ||||| || ||||| || || Sbjct 765 ATGCACGGTTCTCTGGTGACATCTTCTTTAGTACGTGAAACCACTGAAATTGAAAGCCAA 824 Query 182445 AACTATGGTTACAAGTTCGGTCAAGAAGAAGAGACCTATAACATCGT 182491 ||| ||||| || || ||||||||||| || |||||||| || Sbjct 825 AACCGGGGTTATCGCTTTGGACAAGAAGAAGAAACTTATAACATTGT 871 >seq856283 Length=1080 Score = 387 bits (428), Expect = 2e-102 Identities = 449/604 (74%), Gaps = 6/604 (1%) Strand=Plus/Minus Query 183179 GGTTCGATGTCCTTGATGACTGGGTTAAACGCGATCGCTTTGTCTTTGTGGGCTGGTCTG 183238 |||| |||||||| ||||||||| | || |||||||| || || |||||||| ||||| | Sbjct 1080 GGTTTGATGTCCTCGATGACTGGCTGAAGCGCGATCGGTTCGTATTTGTGGGATGGTCGG 1021 Query 183239 GACTCCTACTTCTTCCCACTGCTTATCTTGCCATTGGCGGTTGGCTTACTGGCACAGCTT 183298 | |||| ||| | ||| || ||||| | || || || ||| | || || || | | Sbjct 1020 GTATCCTGCTTTTCCCCTGCGCCTATCTATCTATCGGGGGATGGTTGACAGGAACCACCT 961 Query 183299 TTGTTACGAGTTGGTATACCCATGGACTTGCTTCTTCCTATCTTGAAGGTGCTAACTTTC 183358 ||||||| |||||| ||||| ||||| || |||||| || |||||| ||||||| Sbjct 960 TTGTTACCTCTTGGTACACCCACGGACTCGCCAGTTCCTACCTAGAAGGTTGCAACTTTC 901 Query 183359 TTACGGCAGCTGTCTCGACGCCTGCTGACGCTATGGGTCATTCTCTTCTGTTACTTTGGG 183418 | || || || ||| || || ||| || | |||| || || || ||||| || |||| Sbjct 900 TGACCGCTGCCGTCAGCACCCCCGCTAACAGTTTGGGGCACTCCCTACTGTTCCTGTGGG 841 Query 183419 GTCCTGAGTCTCAAGGGGACTTTCAACGCTGGTGCCAACTTGGGGGACTCTGGAATTTTG 183478 |||| || |||| |||||||| |||||||||||| | ||||| | ||| ||||| Sbjct 840 GTCCCGAAGCTCAGTGGGACTTTACCCGCTGGTGCCAATTAGGGGGTTTATGGGCTTTTG 781 Query 183479 TGGCACTCCACGGTGCCTTTGCTCTCATTGGTTTCATGCTTCGACAGTTTGAACTTGCTC 183538 | || || || || || || || || ||||| ||| || || ||||| ||| | || | Sbjct 780 TAGCCCTGCATGGAGCTTTCGCACTGATTGGGTTCTGCCTGCGTCAGTTGGAAATCGCCC 721 Query 183539 GCTTGATTGGTATCCGTCCTTACAATGCTATTGCGTTCTCTGGTCCTATTGCTGTTTTTG 183598 | ||| |||| || |||||||| ||||| || || ||| | || |||||||| || || | Sbjct 720 GGTTGGTTGGCATTCGTCCTTATAATGCGATCGCTTTCACCGGCCCTATTGCCGTGTTCG 661 Query 183599 TCAGTGTATTCCTTATCTATCCACTGGGTCAGTCTTCATGGTTCTTTGCACCTAGTTTCG 183658 | || |||||| | || || || ||||||| ||| |||||||||||| || || || | Sbjct 660 TGAGCGTATTCTTAATGTACCCCTTGGGTCAATCTGGATGGTTCTTTGCTCCCAGCTTTG 601 Query 183659 GGGTAGCAGCAATCTTTAGATT---CCTATTGTTCCTTCAGGGTTTCCACAACTGGACGT 183715 | ||||||| ||||| | || |||||| |||| | || ||||||||||||||| Sbjct 600 GTGTAGCAGGCATCTTCCGGTTTATCCTATTCTTCC---AAGGATTCCACAACTGGACGC 544 Query 183716 TAAACCCCTTCCATATGATGGGAGTTGCTGGTATACTAGGAGGAGCACTACTCAGTGCTA 183775 | ||||||||||| |||||||||||||| || || || || || || |||||| |||||| Sbjct 543 TCAACCCCTTCCACATGATGGGAGTTGCCGGCATCCTGGGTGGTGCGCTACTCTGTGCTA 484 Query 183776 TCCA 183779 | || Sbjct 483 TTCA 480 Score = 123 bits (136), Expect = 3e-23 Identities = 139/186 (75%), Gaps = 0/186 (0%) Strand=Plus/Minus Query 183807 TGAAGATGGAGAACAAGCAAACACATTCAAGGCATTTGATTCCACTCAAGAAGAAGAGAC 183866 |||||| |||||| | | ||||| ||| || ||||| |||| |||| ||||| || Sbjct 420 TGAAGACGGAGAAGGATCTAACACCTTCCGTGCTTTTGAACCCACCCAAGCCGAAGAAAC 361 Query 183867 GTATTCTATGGTTACAGCGAATCGTTTCTGGTCACAAATCTTCGGGGTTGCGTTTAGCAA 183926 || || ||||| ||||| || || |||||||| || || ||||| |||| ||| ||| Sbjct 360 CTACTCCATGGTGACAGCTAACCGCTTCTGGTCCCAGATTTTCGGTATTGCTTTTTCCAA 301 Query 183927 TAAGCGTTGGTTGCACTTCTTTATGTTGTTTGTTCCTGTCATGGGTCTTTGGGTCTCTTC 183986 || || ||||| |||||||| ||| ||||||||||||| | || || ||| | | ||| Sbjct 300 CAAACGCTGGTTACACTTCTTCATGCTGTTTGTTCCTGTAACAGGGCTGTGGATGTGTTC 241 Query 183987 TATTGG 183992 || || Sbjct 240 CATCGG 235 >seq3816217 Length=329 Score = 300 bits (332), Expect = 2e-76 Identities = 264/329 (80%), Gaps = 0/329 (0%) Strand=Plus/Plus Query 182301 TTCCAAGCTGAGCACAACATTCTTATGCATCCCTTCCACATGTTGGGTGTAGCAGGTGTA 182360 |||||||| || |||||||| || ||||| |||||||| |||||||| || || |||||| Sbjct 1 TTCCAAGCAGAACACAACATCCTGATGCACCCCTTCCATATGTTGGGAGTTGCTGGTGTA 60 Query 182361 TTCGGTGGTTCACTGTTTAGTGCAATGCACGGTTCTTTGGTTACATCTTCACTCGTCCGT 182420 ||||||||| | |||| || ||||||||||||||||| || ||||| | || ||| Sbjct 61 TTCGGTGGTGCTTTGTTCTCCGCGATGCACGGTTCTTTGGTAACTTCTTCCTTGGTGCGT 120 Query 182421 GAGACGACTGAGCAAGAGTCACAGAACTATGGTTACAAGTTCGGTCAAGAAGAAGAGACC 182480 || || || || || || || ||||| |||||||| ||||||||||||||||| ||| Sbjct 121 GAAACCACCGAAATCGAATCTCAAAACTACGGTTACAAATTCGGTCAAGAAGAAGAAACC 180 Query 182481 TATAACATCGTTGCAGCCCATGGCTACTTCGGTCGTTTGATCTTCCAATACGCATCATTC 182540 || ||||| || ||||| || || ||||||||||| ||||||||||||| || || ||| Sbjct 181 TACAACATTGTGGCAGCTCACGGTTACTTCGGTCGCCTGATCTTCCAATATGCTTCTTTC 240 Query 182541 AACAACTCCCGTTCCTTGCACTTCTTCCTTGCTGCATGGCCTGTTGTTGGAATCTGGTTC 182600 |||||| ||||||| ||||||||||| | | ||| ||||| || | || ||||||||| Sbjct 241 AACAACAGCCGTTCCCTGCACTTCTTCTTGGGTGCTTGGCCGGTAATCGGCATCTGGTTC 300 Query 182601 ACCGCACTTGGTGTCTCCACGATGGCATT 182629 ||||| | ||||| ||||| ||||| || Sbjct 301 ACCGCTTTAGGTGTATCCACCATGGCCTT 329 >seq3751544 Length=281 Score = 248 bits (274), Expect = 1e-60 Identities = 220/275 (80%), Gaps = 0/275 (0%) Strand=Plus/Plus Query 181803 TGGGTTACATCTACCAACAATCGTCTCTATGTCGGTTGGTTTGGTGTGCTGATGATCCCA 181862 ||||| ||||| |||||||| || || ||||| || ||||| ||||| ||||||||||| Sbjct 7 TGGGTAACATCCACCAACAACCGCCTTTATGTAGGCTGGTTCGGTGTTCTGATGATCCCT 66 Query 181863 ACTCTGTTGGCGGCAACCATCTGTTTCATCGTTGCTTTCGTAGCAGCACCTCCTGTCGAT 181922 || || | | || |||||||| | |||| | ||||| | || || || || || || Sbjct 67 ACCCTACTAACTGCTACCATCTGCTACATCATCGCTTTTATCGCTGCTCCCCCCGTGGAC 126 Query 181923 ATCGACGGTATCCGCGAACCCGTAGCTGGTTCACTCATGTATGGTAACAACATCATCTCT 181982 || ||||||||||||||||||||||||||||| || |||| || ||||||||||||||| Sbjct 127 ATTGACGGTATCCGCGAACCCGTAGCTGGTTCTCTGTTGTACGGCAACAACATCATCTCT 186 Query 181983 GGTGCTGTTGTCCCATCCTCCAACGCAATTGGTCTTCACTTCTACCCAATCTGGGAAGCT 182042 ||||| ||||| || |||||||| || || ||||| ||||||||||| || |||||||| Sbjct 187 GGTGCGGTTGTTCCTTCCTCCAATGCGATCGGTCTGCACTTCTACCCCATTTGGGAAGCA 246 Query 182043 GCCTCACTTGATGAGTGGCTGTATAACGGTGGTCC 182077 ||| | ||||| ||||| || |||||||| || Sbjct 247 GCCAGCTTGGATGAATGGCTCTACAACGGTGGCCC 281 >seq3654882 Length=237 Score = 136 bits (150), Expect = 5e-27 Identities = 167/228 (73%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 183807 TGAAGATGGAGAACAAGCAAACACATTCAAGGCATTTGATTCCACTCAAGAAGAAGAGAC 183866 |||||| |||||| | | ||||| ||| || ||||| | || |||| ||||| || Sbjct 236 TGAAGACGGAGAAGGATCTAACACCTTCCGAGCCTTTGAACCGACCCAAGCGGAAGAAAC 177 Query 183867 GTATTCTATGGTTACAGCGAATCGTTTCTGGTCACAAATCTTCGGGGTTGCGTTTAGCAA 183926 ||||| ||||| ||||| || || || ||||| ||||| ||||| |||| ||| || Sbjct 176 CTATTCCATGGTGACAGCCAACCGCTTTTGGTCTCAAATTTTCGGTATTGCTTTTTCAAA 117 Query 183927 TAAGCGTTGGTTGCACTTCTTTATGTTGTTTGTTCCTGTCATGGGTCTTTGGGTCTCTTC 183986 || |||||||| |||||||| ||| |||| ||||| || | ||||| ||| | | ||| Sbjct 116 CAAACGTTGGTTACACTTCTTCATGCTGTTCGTTCCCGTAACAGGTCTGTGGATGTGTTC 57 Query 183987 TATTGGCATCATTGGGCTTGCTCTTAATCTTCGTGCTTATGATTTTGT 184034 || || | | || || ||| | || || ||||||||||| || || Sbjct 56 CATCGGTGTAGTGGGTCTAGCTGTAAACCTGCGTGCTTATGACTTCGT 9 >seq3509123 Length=199 Score = 131 bits (144), Expect = 2e-25 Identities = 139/181 (77%), Gaps = 8/181 (4%) Strand=Plus/Plus Query 182637 AACGGTTTCAACTTCAACCAGTCCATCCTTGATGGTC---AG-GGTCGTGTCCTTAACAC 182692 |||||||||||||||||||| |||| | |||| | || ||||| || ||||||| Sbjct 1 AACGGTTTCAACTTCAACCA----ATCCGTAATGGACTCCAGCGGTCGGGTAGTTAACAC 56 Query 182693 TTGGGCAGATGTATTGAACCGTGCTGGTCTTGGTATGGAAGTTATGCATGAGCGTAACGC 182752 ||||| ||||| | ||||| ||| || ||||||||||| ||||| ||||| ||||| Sbjct 57 CTGGGCTGATGTCATCAACCGCGCTAACCTGGGTATGGAAGTAATGCACGAGCGCAACGC 116 Query 182753 ACACAACTTCCCACTAGATCTTGCTGCTGCTGAGTCAACTCCTGTTGCACTTGTAGCACC 182812 ||||||||||| ||||| | ||| |||||||||| ||||| || | || ||||| Sbjct 117 TCACAACTTCCCCTTAGATTTAGCTTCTGCTGAGTCTGAGCCTGTAGCTTTGGTTGCACC 176 Query 182813 T 182813 | Sbjct 177 T 177 >seq2226574 Length=116 Score = 113 bits (124), Expect = 5e-20 Identities = 94/115 (82%), Gaps = 0/115 (0%) Strand=Plus/Plus Query 183697 GGTTTCCACAACTGGACGTTAAACCCCTTCCATATGATGGGAGTTGCTGGTATACTAGGA 183756 || |||||||||||||| ||||||||||||| |||||||||||||| || || || || Sbjct 2 GGATTCCACAACTGGACTCTAAACCCCTTCCACATGATGGGAGTTGCGGGAATCCTCGGC 61 Query 183757 GGAGCACTACTCAGTGCTATCCATGGTGTCACAGTAGAGAATACATTGTATGAAG 183811 || || ||||| ||||||| ||||||| |||||||| || || ||| ||||| Sbjct 62 GGTGCGCTACTATGTGCTATTCATGGTGCTACAGTAGAAAACACCCTGTTTGAAG 116 >seq658184 Length=760 Score = 113 bits (124), Expect = 5e-20 Identities = 121/160 (76%), Gaps = 0/160 (0%) Strand=Plus/Minus Query 183179 GGTTCGATGTCCTTGATGACTGGGTTAAACGCGATCGCTTTGTCTTTGTGGGCTGGTCTG 183238 |||| |||||||| ||||||||| | || || ||||||||||| || || || ||||||| Sbjct 162 GGTTTGATGTCCTCGATGACTGGCTGAAGCGTGATCGCTTTGTATTCGTAGGATGGTCTG 103 Query 183239 GACTCCTACTTCTTCCCACTGCTTATCTTGCCATTGGCGGTTGGCTTACTGGCACAGCTT 183298 | |||| ||| | ||| ||| ||||| | || ||||| ||||| || || || | | Sbjct 102 GTATCCTGCTTTTCCCCTGTGCCTATCTATCTATCGGCGGATGGCTCACCGGAACTACCT 43 Query 183299 TTGTTACGAGTTGGTATACCCATGGACTTGCTTCTTCCTA 183338 ||||||| |||||| || || ||||| || |||||| Sbjct 42 TTGTTACCTCTTGGTACACTCACGGACTCGCCAGTTCCTA 3 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 581353722171600