Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ophionereis_20fasciata_20[genbank_20GCA_5F900067615.1_202017-02-27] 3,968,282 sequences; 1,184,528,790 total letters Query= NC_015290.1 Length=182180 Score E Sequences producing significant alignments: (Bits) Value seq577692 370 1e-97 seq3816217 233 2e-56 seq3751544 226 3e-54 seq3172301 113 5e-20 seq3509123 87.8 2e-12 >seq577692 Length=2825 Score = 370 bits (410), Expect = 1e-97 Identities = 496/690 (72%), Gaps = 0/690 (0%) Strand=Plus/Plus Query 169698 TTGGGTAACAAGCACAAACAACCGCATCTATGTTGGTTGGTTCGGTGTCTTGATGATCCC 169757 |||||||||| || || |||||| | ||||| |||||||| ||| | |||||||||| Sbjct 182 TTGGGTAACATCTACCAATAACCGCCTTTATGTAGGTTGGTTTGGTATTGTGATGATCCC 241 Query 169758 ATGTCTATTAGCAGCAGCAACCTGCTTTATCGTTGCTTTCATCGCAGCTCCACCTGTGGA 169817 | || | || | | ||| ||| | | ||||| | || || || |||||||| Sbjct 242 TACCTTGCTAACTGCCACCATCTGTTTTGTGTTAGCTTTTGTAGCTGCACCTCCTGTGGA 301 Query 169818 CATCGATGGAATCAGAGAACCTGTAGCAGGTTCATTCATGTATGGTAACAACATCATCTC 169877 || || || ||| | ||||| || | ||||| | |||| || || ||||||||| | Sbjct 302 TATTGACGGCATCCGCGAACCCGTTTCCGGTTCTCTGTTGTACGGCAATAACATCATCAC 361 Query 169878 TGGTGCAGTTGTTCCATCTTCAAACGCAATCGGTCTCCACTTCTATCCTATTTGGGAAGC 169937 | || ||||| || ||| || || || || | ||||| ||||| || |||||||| Sbjct 362 CGCCGCTGTTGTACCCAGTTCTAATGCGATTGGGTTGCACTTTTATCCCATCTGGGAAGC 421 Query 169938 AGCAACTCTAGATGAGTGGTTGTATAACGGTGGTCCTTATCAATTAGTTATCTTCCACTT 169997 |||| | | ||||| ||| | |||||||| || || || || || || | |||||||| Sbjct 422 GGCAAATATTGATGAATGGCTTTATAACGGCGGCCCCTACCAGTTGATTGTTTTCCACTT 481 Query 169998 CCTTATCGGAATCTCTGCCTACATGGGTAGACAGTGGGAACTATCATACCGTTTAGGTAT 170057 ||| ||||| || | | ||| |||||| | |||||||||| || || || ||||| || Sbjct 482 CCTAATCGGCATTTTTTGCTATATGGGTCGTGAGTGGGAACTGTCTTATCGGTTAGGAAT 541 Query 170058 GCGTCCTTGGATCTGTGTAGCATATTCTGCTCCAGTGTCAGCAGCATTCGCTGTATTCTT 170117 |||||||||||| ||| || ||| ||||| || | || || || ||| | || Sbjct 542 GCGTCCTTGGATTGCTGTTGCTTATAGCGCTCCTGTAGCTGCTGCGACGGCGGTACTGTT 601 Query 170118 AGTGTATCCTTTCGGTCAGGGATCTTTCTCAGACGGAATGCCTCTAGGTATCTCAGGTAC 170177 ||| ||| || ||||||| || ||||| || || || | || || || || || || || Sbjct 602 AGTTTATTCTATCGGTCAAGGTTCTTTTTCTGATGGTTTACCGCTGGGGATTTCTGGCAC 661 Query 170178 ATTTAACTTCATGTTCGTATTCCAAGCAGAGCACAACATTCTTATGCACCCATTCCATAT 170237 ||||||||| ||||| || | ||||||||||| || || | |||||||| |||||||| Sbjct 662 ATTTAACTTTATGTTAGTGCTGCAAGCAGAGCATAATGTTTTAATGCACCCCTTCCATAT 721 Query 170238 GGCAGGGGTTGCTGGTATGTTCGGAGGAGCACTCTTCTCAGCAATGCACGGTTCACTTGT 170297 | || || |||||| | || || || || || |||||||| ||||||||||| || || Sbjct 722 GCTGGGAGTAGCTGGTGTCTTTGGTGGCGCTCTTTTCTCAGCTATGCACGGTTCTCTGGT 781 Query 170298 AACATCTTCTCTAATCAGAGAGACAACAGATAACGAGTCACAGAACTATGGATACAAATT 170357 ||||||||| || | | || || || || | || || ||| || || || Sbjct 782 GACATCTTCTTTAGTACGTGAAACCACTGAAATTGAAAGCCAAAACCGGGGTTATCGCTT 841 Query 170358 CGGACAAGAAGAAGAAACATACAACATTGT 170387 ||||||||||||||||| || |||||||| Sbjct 842 TGGACAAGAAGAAGAAACTTATAACATTGT 871 >seq3816217 Length=329 Score = 233 bits (258), Expect = 2e-56 Identities = 249/329 (76%), Gaps = 0/329 (0%) Strand=Plus/Plus Query 170197 TTCCAAGCAGAGCACAACATTCTTATGCACCCATTCCATATGGCAGGGGTTGCTGGTATG 170256 ||||||||||| |||||||| || |||||||| ||||||||| || ||||||||| | Sbjct 1 TTCCAAGCAGAACACAACATCCTGATGCACCCCTTCCATATGTTGGGAGTTGCTGGTGTA 60 Query 170257 TTCGGAGGAGCACTCTTCTCAGCAATGCACGGTTCACTTGTAACATCTTCTCTAATCAGA 170316 ||||| || || | ||||| || ||||||||||| | ||||| ||||| | | | Sbjct 61 TTCGGTGGTGCTTTGTTCTCCGCGATGCACGGTTCTTTGGTAACTTCTTCCTTGGTGCGT 120 Query 170317 GAGACAACAGATAACGAGTCACAGAACTATGGATACAAATTCGGACAAGAAGAAGAAACA 170376 || || || || | ||| || || ||||| || ||||||||||| |||||||||||||| Sbjct 121 GAAACCACCGAAATCGAATCTCAAAACTACGGTTACAAATTCGGTCAAGAAGAAGAAACC 180 Query 170377 TACAACATTGTTGCAGCACATGGATACTTTGGTAGACTTATCTTCCAATATGCTAGCTTT 170436 ||||||||||| ||||| || || ||||| ||| | || ||||||||||||||| || Sbjct 181 TACAACATTGTGGCAGCTCACGGTTACTTCGGTCGCCTGATCTTCCAATATGCTTCTTTC 240 Query 170437 AACAATAGTCGTAGTCTTCACTTCTTCCTTGCTACATTCCCTGTAGTATGCATCTGGTTA 170496 ||||| || ||| || ||||||||| | | | | | || ||| | |||||||||| Sbjct 241 AACAACAGCCGTTCCCTGCACTTCTTCTTGGGTGCTTGGCCGGTAATCGGCATCTGGTTC 300 Query 170497 ACTTCAATGGGTATTTGCACAATGGCATT 170525 || | | ||| | | ||| ||||| || Sbjct 301 ACCGCTTTAGGTGTATCCACCATGGCCTT 329 >seq3751544 Length=281 Score = 226 bits (250), Expect = 3e-54 Identities = 215/275 (78%), Gaps = 0/275 (0%) Strand=Plus/Plus Query 169699 TGGGTAACAAGCACAAACAACCGCATCTATGTTGGTTGGTTCGGTGTCTTGATGATCCCA 169758 ||||||||| ||| ||||||||| | ||||| || ||||||||||| |||||||||| Sbjct 7 TGGGTAACATCCACCAACAACCGCCTTTATGTAGGCTGGTTCGGTGTTCTGATGATCCCT 66 Query 169759 TGTCTATTAGCAGCAGCAACCTGCTTTATCGTTGCTTTCATCGCAGCTCCACCTGTGGAC 169818 ||| || | || | | ||||| ||| | ||||| ||||| ||||| || |||||| Sbjct 67 ACCCTACTAACTGCTACCATCTGCTACATCATCGCTTTTATCGCTGCTCCCCCCGTGGAC 126 Query 169819 ATCGATGGAATCAGAGAACCTGTAGCAGGTTCATTCATGTATGGTAACAACATCATCTCT 169878 || || || ||| | ||||| ||||| ||||| | |||| || ||||||||||||||| Sbjct 127 ATTGACGGTATCCGCGAACCCGTAGCTGGTTCTCTGTTGTACGGCAACAACATCATCTCT 186 Query 169879 GGTGCAGTTGTTCCATCTTCAAACGCAATCGGTCTCCACTTCTATCCTATTTGGGAAGCA 169938 ||||| |||||||| || || || || |||||||| |||||||| || |||||||||||| Sbjct 187 GGTGCGGTTGTTCCTTCCTCCAATGCGATCGGTCTGCACTTCTACCCCATTTGGGAAGCA 246 Query 169939 GCAACTCTAGATGAGTGGTTGTATAACGGTGGTCC 169973 || | | ||||| ||| | || |||||||| || Sbjct 247 GCCAGCTTGGATGAATGGCTCTACAACGGTGGCCC 281 >seq3172301 Length=157 Score = 113 bits (124), Expect = 5e-20 Identities = 119/157 (76%), Gaps = 0/157 (0%) Strand=Plus/Minus Query 170039 TATCATACCGTTTAGGTATGCGTCCTTGGATCTGTGTAGCATATTCTGCTCCAGTGTCAG 170098 |||| ||||| || || ||||||||||||||||| ||||| || || || || | | Sbjct 157 TATCCTACCGCTTGGGAATGCGTCCTTGGATCTGCGTAGCTTACAGCGCACCTGTTGCGG 98 Query 170099 CAGCATTCGCTGTATTCTTAGTGTATCCTTTCGGTCAGGGATCTTTCTCAGACGGAATGC 170158 | || || |||||||| | || || |||| || || |||||||| ||||| |||| Sbjct 97 CTGCTAGTGCAGTATTCTTGATCTACCCCATCGGACAAGGTTCTTTCTCCGACGGTATGC 38 Query 170159 CTCTAGGTATCTCAGGTACATTTAACTTCATGTTCGT 170195 |||| |||||||| || || || ||||||||||| || Sbjct 37 CTCTGGGTATCTCCGGAACTTTCAACTTCATGTTGGT 1 >seq3509123 Length=199 Score = 87.8 bits (96), Expect = 2e-12 Identities = 114/154 (74%), Gaps = 8/154 (5%) Strand=Plus/Plus Query 170533 AATGGATTTAACTTCAACCAGTCAATCGTAGATGGA-TCT---GGTAAAGTAGTTCCTAC 170588 || || || ||||||||||| || |||| ||||| || ||| |||||| || Sbjct 1 AACGGTTTCAACTTCAACCAATC---CGTA-ATGGACTCCAGCGGTCGGGTAGTTAACAC 56 Query 170589 ATGGGCAGACGTTCTTAACAGAGCAAACCTAGGTATGGAAGTAATGCATGAGCGTAATGC 170648 ||||| || || | ||| | || ||||| ||||||||||||||||| ||||| || || Sbjct 57 CTGGGCTGATGTCATCAACCGCGCTAACCTGGGTATGGAAGTAATGCACGAGCGCAACGC 116 Query 170649 ACACAACTTCCCACTTGACTTGGCAACTGCTGAG 170682 ||||||||||| | || || || |||||||| Sbjct 117 TCACAACTTCCCCTTAGATTTAGCTTCTGCTGAG 150 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 553936684660800