Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ophionereis_20fasciata_20[genbank_20GCA_5F900067615.1_202017-02-27] 3,968,282 sequences; 1,184,528,790 total letters Query= NC_015398.1 Length=101487 Score E Sequences producing significant alignments: (Bits) Value seq396905 91.5 9e-14 >seq396905 Length=1799 Score = 91.5 bits (100), Expect = 9e-14 Identities = 92/120 (77%), Gaps = 0/120 (0%) Strand=Plus/Minus Query 34769 CAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATC 34828 |||||| | || ||||||||||||||||| ||||| ||||| || ||| |||| |||| Sbjct 1207 CAAAACAATATGGATTGTGCTTTCTTTCTGTATGTTGTAGTCAGACAGGGTTCGGTCATT 1148 Query 34829 ATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34888 || ||||| | || ||||| || | || ||||||||| | || | || |||||||| Sbjct 1147 TTCAAGCTGATCACCAGCAAAGATAAAACGCTGCTGGTCTGGAGGAATACCTTCCTTGTC 1088 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 308933203378896