Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ophionereis_20fasciata_20[genbank_20GCA_5F900067615.1_202017-02-27] 3,968,282 sequences; 1,184,528,790 total letters Query= NC_015569.1 Length=178563 Score E Sequences producing significant alignments: (Bits) Value seq577692 399 2e-106 seq3816217 309 3e-79 seq3751544 230 3e-55 seq3172301 109 6e-19 >seq577692 Length=2825 Score = 399 bits (442), Expect = 2e-106 Identities = 505/692 (73%), Gaps = 4/692 (1%) Strand=Plus/Minus Query 84258 ACAATATTATAAGTTTCCTCTTCTTGACCGAACTTGTAACCATAGTTTTGTGAGACATTT 84317 ||||| ||||||||||| |||||||| || || ||||| |||||| || || Sbjct 871 ACAATGTTATAAGTTTCTTCTTCTTGTCCAAAGCGATAACCCCGGTTTTGGCTTTCAATT 812 Query 84318 TCTGTAGTTTCTCGGATTAGAGAAGAAGTGACAAGTGAACCATGCATTGCAGAGAATAGA 84377 || || ||||| || | || |||||| || || || ||||| ||||| || ||||| ||| Sbjct 811 TCAGTGGTTTCACGTACTAAAGAAGATGTCACCAGAGAACCGTGCATAGCTGAGAAAAGA 752 Query 84378 GCTCCACCGAATACACCAGCAACTCCCAACATGTGAAAGGGATGCATAAGGATGTTATGT 84437 || ||||| || |||||||| ||||||| ||| || ||||| ||||| | | ||||| Sbjct 751 GCGCCACCAAAGACACCAGCTACTCCCAGCATATGGAAGGGGTGCATTAAAACATTATGC 692 Query 84438 TCCGCCTGGAAGACAAGCATGTAGTTGAACGTTCCTGAGATACCAAGTGGCATGCCATCA 84497 || || || | || | ||| |||| || || || || || || || || | |||||| Sbjct 691 TCTGCTTGCAGCACTAACATAAAGTTAAATGTGCCAGAAATCCCCAGCGGTAAACCATCA 632 Query 84498 GAGAAAGAACCTTGCCCGAAAGGATACACAAGGAATACAGCAGATGCCGCTGCAACTGGA 84557 || ||||||||||| |||| || ||| || | | ||| || | || || || || ||| Sbjct 631 GAAAAAGAACCTTGACCGATAGAATAAACTAACAGTACCGCCGTCGCAGCAGCTACAGGA 572 Query 84558 GCAGAGTAAGCAACACAGATCCATGGACGCATACCGAGACGATATGAAAGTTCCCATTCA 84617 || ||||||||| ||||| |||||||| || | ||||| || |||||||| ||| Sbjct 571 GCGCTATAAGCAACAGCAATCCAAGGACGCATTCCTAACCGATAAGACAGTTCCCACTCA 512 Query 84618 CGACCCATGTA--AGCAAATGCACCAATCAGGAAGTGAAAGACAACAAGTTGATAAGGTC 84675 |||||||| || | |||||| | || |||||||| || |||| | || || || | Sbjct 511 CGACCCATATAGCAAAAAATGC--CGATTAGGAAGTGGAAAACAATCAACTGGTAGGGGC 454 Query 84676 CACCATTATATAGCCATTCGTCCATACTTGCTGCTTCCCAAATAGGATAGAAATGTAGAC 84735 | || ||||| |||||||| || ||| |||| |||||||| || ||||| || || | | Sbjct 453 CGCCGTTATAAAGCCATTCATCAATATTTGCCGCTTCCCAGATGGGATAAAAGTGCAACC 394 Query 84736 CAATAGCATTAGAGGATGGAACTACGGCACCAGAAATGATGTTGTTTCCGTACATGAGAG 84795 |||| |||||||| || || || || | | |||||||| || ||||||| |||| Sbjct 393 CAATCGCATTAGAACTGGGTACAACAGCGGCGGTGATGATGTTATTGCCGTACAACAGAG 334 Query 84796 AACCAGCGACTGGCTCACGGATACCGTCAATATCAACTGGGGGTGCACCAACGAATGCAA 84855 |||| | || || || ||||| ||||||||||| || || |||||| | || || || | Sbjct 333 AACCGGAAACGGGTTCGCGGATGCCGTCAATATCCACAGGAGGTGCAGCTACAAAAGCTA 274 Query 84856 TGATGAAACAGACAGTGGCAGCAAGTAGAGTTGGAATCATAAGAGTTCCAAACCAACCAA 84915 | ||||||| ||||||| || | || || ||||| | | | ||||||||||| | Sbjct 273 ACACAAAACAGATGGTGGCAGTTAGCAAGGTAGGGATCATCACAATACCAAACCAACCTA 214 Query 84916 CATAGATACGGTTGTTAGTGGAGGTGACCCAA 84947 |||| | ||||| || || || || |||||| Sbjct 213 CATAAAGGCGGTTATTGGTAGATGTTACCCAA 182 >seq3816217 Length=329 Score = 309 bits (342), Expect = 3e-79 Identities = 266/329 (81%), Gaps = 0/329 (0%) Strand=Plus/Minus Query 84120 AATGCCATGGTGCTAACACCCAGAGCAGCAAACCAAATGCCAACCACTGGCCAAGCAGCC 84179 || ||||||||| ||||| | ||| | ||||| ||||| | || ||||||||| || Sbjct 329 AAGGCCATGGTGGATACACCTAAAGCGGTGAACCAGATGCCGATTACCGGCCAAGCACCC 270 Query 84180 AAGAAAAAGTGGAGAGAACGACTATTGTTGAAGGAAGCATACTGGAAGATAAGACGACCG 84239 ||||| ||||| || ||||| || |||||||| |||||||| |||||||| || |||||| Sbjct 269 AAGAAGAAGTGCAGGGAACGGCTGTTGTTGAAAGAAGCATATTGGAAGATCAGGCGACCG 210 Query 84240 AAGTAGCCGTGAGCAGCAACAATATTATAAGTTTCCTCTTCTTGACCGAACTTGTAACCA 84299 ||||| |||||||| || ||||| || || ||||| |||||||||||||| |||||||| Sbjct 209 AAGTAACCGTGAGCTGCCACAATGTTGTAGGTTTCTTCTTCTTGACCGAATTTGTAACCG 150 Query 84300 TAGTTTTGTGAGACATTTTCTGTAGTTTCTCGGATTAGAGAAGAAGTGACAAGTGAACCA 84359 |||||||| || | |||| || ||||| || | | |||||||| || | ||||| Sbjct 149 TAGTTTTGAGATTCGATTTCGGTGGTTTCACGCACCAAGGAAGAAGTTACCAAAGAACCG 90 Query 84360 TGCATTGCAGAGAATAGAGCTCCACCGAATACACCAGCAACTCCCAACATGTGAAAGGGA 84419 ||||| || ||||| | ||| ||||||||||||||||||||||||||||| || ||||| Sbjct 89 TGCATCGCGGAGAACAAAGCACCACCGAATACACCAGCAACTCCCAACATATGGAAGGGG 30 Query 84420 TGCATAAGGATGTTATGTTCCGCCTGGAA 84448 ||||| |||||||| ||||| || ||||| Sbjct 29 TGCATCAGGATGTTGTGTTCTGCTTGGAA 1 >seq3751544 Length=281 Score = 230 bits (254), Expect = 3e-55 Identities = 216/275 (79%), Gaps = 0/275 (0%) Strand=Plus/Minus Query 84672 GGTCCACCATTATATAGCCATTCGTCCATACTTGCTGCTTCCCAAATAGGATAGAAATGT 84731 || ||||| || || |||||||| |||| || |||||||||||||| || ||||| || Sbjct 281 GGGCCACCGTTGTAGAGCCATTCATCCAAGCTGGCTGCTTCCCAAATGGGGTAGAAGTGC 222 Query 84732 AGACCAATAGCATTAGAGGATGGAACTACGGCACCAGAAATGATGTTGTTTCCGTACATG 84791 ||||| || ||||| ||||| ||||| || |||||||| ||||||||||| ||||||| Sbjct 221 AGACCGATCGCATTGGAGGAAGGAACAACCGCACCAGAGATGATGTTGTTGCCGTACAAC 162 Query 84792 AGAGAACCAGCGACTGGCTCACGGATACCGTCAATATCAACTGGGGGTGCACCAACGAAT 84851 ||||||||||| || || || |||||||||||||| || || ||||| ||| | | || Sbjct 161 AGAGAACCAGCTACGGGTTCGCGGATACCGTCAATGTCCACGGGGGGAGCAGCGATAAAA 102 Query 84852 GCAATGATGAAACAGACAGTGGCAGCAAGTAGAGTTGGAATCATAAGAGTTCCAAACCAA 84911 || |||||| | |||| || |||| ||||| || || ||||| ||| || ||||| Sbjct 101 GCGATGATGTAGCAGATGGTAGCAGTTAGTAGGGTAGGGATCATCAGAACACCGAACCAG 42 Query 84912 CCAACATAGATACGGTTGTTAGTGGAGGTGACCCA 84946 || ||||| | |||||||| ||||| || ||||| Sbjct 41 CCTACATAAAGGCGGTTGTTGGTGGATGTTACCCA 7 >seq3172301 Length=157 Score = 109 bits (120), Expect = 6e-19 Identities = 107/138 (78%), Gaps = 0/138 (0%) Strand=Plus/Plus Query 84455 CATGTAGTTGAACGTTCCTGAGATACCAAGTGGCATGCCATCAGAGAAAGAACCTTGCCC 84514 |||| ||||||| ||||| |||||||| || ||||| || || |||||||||||||| || Sbjct 6 CATGAAGTTGAAAGTTCCGGAGATACCCAGAGGCATACCGTCGGAGAAAGAACCTTGTCC 65 Query 84515 GAAAGGATACACAAGGAATACAGCAGATGCCGCTGCAACTGGAGCAGAGTAAGCAACACA 84574 || || || | | |||||| ||| || || ||||| || || |||||| || || Sbjct 66 GATGGGGTAGATCAAGAATACTGCACTAGCAGCCGCAACAGGTGCGCTGTAAGCTACGCA 125 Query 84575 GATCCATGGACGCATACC 84592 |||||| |||||||| || Sbjct 126 GATCCAAGGACGCATTCC 143 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 542936415700560