Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ophionereis_20fasciata_20[genbank_20GCA_5F900067615.1_202017-02-27] 3,968,282 sequences; 1,184,528,790 total letters Query= NC_015960.1 Length=175699 Score E Sequences producing significant alignments: (Bits) Value seq760737 370 1e-97 seq456579 176 5e-39 seq942746 156 5e-33 seq3830724 111 2e-19 seq718041 96.9 4e-15 seq3772600 95.1 1e-14 seq3878943 89.7 5e-13 >seq760737 Length=2966 Score = 370 bits (410), Expect = 1e-97 Identities = 632/901 (70%), Gaps = 14/901 (2%) Strand=Plus/Minus Query 18651 AGAATTCATTACTCCCATTTTTTGATATTCGGCAACTCTTTTTTCAAAGAAATTAGTTTT 18710 |||| ||| || || |||||| || ||| |||||||||||||||| || |||| ||| Sbjct 1559 AGAACACATAACCCCTGATTTTTGGTACTCGCCAACTCTTTTTTCAAAAAAGTTAGATTT 1500 Query 18711 TCCCTCTAATGATATACATTCCATAAAATCAAATGGATTTTTTACATTATATAttttttt 18770 || || | ||| ||| |||||||| ||||| || ||||| | | ||| ||||| Sbjct 1499 CCCTTCAATTGAAATATTATCCATAAAGTCAAACGGGTTTTTAGCGCGAAATAACTTTTT 1440 Query 18771 GAATCCTAATTCTAATAGTAGTCTATCCGCTACAAATTTAATATA-TGTGTTCATCATAT 18829 | || ||||||| || || | || || ||||||| ||||| ||| ||||| | || Sbjct 1439 ACAACCCAATTCTACAAGAAGACGGTCTGCCACAAATTCTATATACTGT-TTCATAAGAT 1381 Query 18830 CACAATTCATTCCTATTAATTTAACAGGTAGTGCATCTGTAAGAAATTCTTGTTCTATAT 18889 | ||||||||| || | |||| || ||| | || ||| |||| ||| |||| Sbjct 1380 CTTTATTCATTCCAATCATTTTATTCGGGCATGCCGTTTCAAAAAAATCTTTTTCGATAT 1321 Query 18890 TTACTGCCTCTGATATAATAGATACAACTCTATCTTCATTAGGAGGGTATAG-AAGA--T 18946 ||||| || | ||| || | |||||| || | | ||| | Sbjct 1320 CGACTGCGTCACCAACAATTTTGTAAATGATGGATTCATTCGGTTTTTGTTTTAAGCACT 1261 Query 18947 GTTTAAACATCAAACATGCAAAATCACAATGTAGTCCCTCGTCTCTACTTATCAATTCAT 19006 | |||||| | || | |||||| ||||||| || ||||||||| || ||||| | Sbjct 1260 CTCTAAACACAAGGCAAGAAAAATCGCAATGTAAGCCTTCGTCTCTAGAAATTAATTCGT 1201 Query 19007 TAGAAAATGTTAAACCAGGCATCAGTCCTCttttttttAACCAGAATATAGAAGCAAATG 19066 | ||||| || | || || | || ||||| ||||| | ||| ||||| | ||| |||| Sbjct 1200 TTGAAAAAGTGAGTCCTGGAAGCAACCCTCTCTTTTTCAGCCAAAATATCGCAGCGAATG 1141 Query 19067 ATCCAGAAAAGAATATACCTTCTACTGCTGCAAAAGCAACTAGTCTTTCTCCATAACTAG 19126 ||||| |||| || || |||||||| ||||||||| | || || ||| || || || Sbjct 1140 ATCCACAAAAAAAAATGCCTTCTACACATGCAAAAGCGATTAACCTCTCTGCA-AATGAG 1082 Query 19127 CATCATTATTATG-AATCCATTTCAGTGCCCAATCAGCCTTCTTTTTTACACATGGCATT 19185 | || | ||| |||||| | |||||||||||||||||||| || || || | Sbjct 1081 --TTATCAG-ATGCAATCCAAGCTAAAGCCCAATCAGCCTTCTTTTTAACGCAAGGTAAC 1025 Query 19186 GTCTCTATAGAATTAAATAGATACATACGCTCATCTGTATCTTTAACATATGCATCTATC 19245 || || || | ||||| ||| |||| |||||| ||||| | ||| | || || Sbjct 1024 GTTTCGATCGCGTTAAAAAGACACATTTTTTCATCTTCGTCTTTGATATAAGTTTCAATT 965 Query 19246 AATAAACTGTACATTTCTGAATGAATATTTTCTATAGCCATCTGAAATCCGTAAAAACAT 19305 || || || |||||||| | |||||||||||| || || |||||||| || ||||| ||| Sbjct 964 AACAAGCTATACATTTCCGTATGAATATTTTCCATCGCAATCTGAAAGCCATAAAAGCAT 905 Query 19306 CTTGCTTCTGTTATCTGTACTTCA-CTACAAAATCTTTCGACCAAATTTTCATTAACTAT 19364 || ||||| || || ||||| ||| |||||| | ||| | |||||| || || Sbjct 904 TTTATTTCTGCAATTTGAACTTCGGCTA-AAAATCGCTGGACTATATTTTCTAATACAAT 846 Query 19365 TCCATCACTAGCTGCAAAAAATGCTAATACATGTTTAATAAAATGT-TTTTCATCTGAGG 19423 | |||| | |||||| || ||||||| | || || || ||| |||||||||| | Sbjct 845 GCAATCAGCATTTGCAAAGAAAGCTAATATGTACTTGATGAA-TGTCTTTTCATCTGTAG 787 Query 19424 TTAATGTATTCCAATCATTAATATCTTTAGATAAATCTACTTCTTCAACTGTCCAAAAAG 19483 ||||| | ||| || | | ||| || | |||||| ||||| | |||||||||||| | Sbjct 786 TTAATTGGTACCAGTCTTGTAAATCCTTTGTTAAATCAACTTCATTAACTGTCCAAAATG 727 Query 19484 AAGCCTCTGCTTTTTTATACATGTTCCATATATCACGATATTGTATAGGAAATATAACAA 19543 |||||| ||||||||||||||| |||| | | | ||||||||| ||||||| ||||| Sbjct 726 AAGCCTGTGCTTTTTTATACATTGTCCAAAATTTATCATATTGTATTGGAAATAGAACAA 667 Query 19544 A 19544 | Sbjct 666 A 666 >seq456579 Length=1737 Score = 176 bits (194), Expect = 5e-39 Identities = 404/604 (67%), Gaps = 16/604 (3%) Strand=Plus/Minus Query 18952 AACATCAAACATGCAAAATCACAATGTAGTCCCTCGTCTCTACTTATCAATTCATTAGAA 19011 |||| ||||| || |||||||| |||| ||||||| | || || | ||| || || Sbjct 1092 AACAATAAACAAGCGAAATCACAGTGTAACGCCTCGTCGCGGCTGATGAGTTCGTTGGAG 1033 Query 19012 AATGTTAAACCAGGCATCAGTCCTCttttttttAACCAGAATATAGAAGCAAATGATCCA 19071 || || | ||| |||||||| || ||||| || ||||||||||| | || || ||||| Sbjct 1032 AAGGTCAGACCGGGCATCAGACCCCTTTTCTTCAACCAGAATATCGCGGCGAACGATCCG 973 Query 19072 GAAAAGAATATACCTTCTACTGCTGCAAAAGCAACTAGTCTTTCTCCATAACTAGCATCA 19131 |||||||| || ||||| || || ||||| || ||||| | || || | Sbjct 972 GAAAAGAAAATTCCTTCGACGATGGCGAAAGCGACGAGTCTCGTGGCGAAAGAGGCTCGA 913 Query 19132 TTATTATGAATCCATTTCAGTGCCCAATCAGCCTTCTTTTTTACACATGGCATTGTCTCT 19191 ||| || |||||| |||| ||||| || || |||||||| || || || || || Sbjct 912 CTATCATTGATCCATCTCAGGGCCCAGTCGGCTTTCTTTTTCACCGCGGGAATAGTTTCA 853 Query 19192 ATAGAATTAAATAGATACATACGCTCATC---TGTATCTTTAACATATGCATCTATCAAT 19248 || | || | | ||| || | || || ||| | | || | |||||| | Sbjct 852 ATCGCTTTGAGCAAATA---TCGTTTTTCGCGTGAATCCTGGATGTAGGTATCTATGAGA 796 Query 19249 AAACTGTACATTTCTGAATGAATATTTTCTATAGCCATCTGAAATCCGTAAAAACATCTT 19308 | | ||||||||| || || || ||||| || |||||||| |||||||| | | Sbjct 795 AGGCCGTACATTTCCGAGTGGATGTTTTCCATCATGATCTGAAACCCGTAAAAGAACCGC 736 Query 19309 GCTTCTGTTATCTGTACTTCACTACAAAATC-TTTCGACCAAATTTTCATTAACTATTCC 19367 ||||||| ||||| ||||| |||||||| | | ||| ||| |||||| ||| || || Sbjct 735 GCTTCTGGAATCTGGACTTCCCTACAAAACCGTGTCG-CCAGATTTTCGACAACGATCCC 677 Query 19368 ATCACTAGCTGCAAAAAATGCTAATACATGTTTAATAAAATGTTTTTCATCTGAGGTTAA 19427 || || | || ||||| || | | || || |||| ||| || | || | Sbjct 676 GTCGCTTCCCGCGAAAAAGGCGAGGATGTGGGAGATGAAATATTTCTC----GCCGTCAT 621 Query 19428 TG----TATTCCAATCATTAATATCTTTAGATAAATCTACTTCTTCAACTGTCCAAAAAG 19483 || | | ||||| ||||||| | | ||| || || | |||||||||| Sbjct 620 TGAGACTTTCCCAATGGGGTTTATCTTTGGCGAGATCAACCTCAGCCGTCGTCCAAAAAG 561 Query 19484 AAGCCTCTGCTTTTTTATACATGTTCCATATATCACGATATTGTATAGGAAATATAACAA 19543 ||||||| ||| || ||||| ||||| | ||| |||||||| || || || || | Sbjct 560 AAGCCTCCGCTCGCTTGTACATTTTCCACACATCTTCGTATTGTATCGGGAAAATGACGA 501 Query 19544 ATCT 19547 |||| Sbjct 500 ATCT 497 >seq942746 Length=519 Score = 156 bits (172), Expect = 5e-33 Identities = 170/226 (75%), Gaps = 0/226 (0%) Strand=Plus/Minus Query 18983 CCTCGTCTCTACTTATCAATTCATTAGAAAATGTTAAACCAGGCATCAGTCCTCtttttt 19042 |||||||||| || || | |||||| || || || ||||||||||| || || || || | Sbjct 373 CCTCGTCTCTGCTGATGAGTTCATTGGAGAAAGTCAAACCAGGCATAAGACCCCTCTTCT 314 Query 19043 ttAACCAGAATATAGAAGCAAATGATCCAGAAAAGAATATACCTTCTACTGCTGCAAAAG 19102 ||| |||||| || | |||||| || || || ||||| ||||| ||||| || ||||||| Sbjct 313 TTAGCCAGAAGATGGCAGCAAAAGACCCTGAGAAGAAGATACCCTCTACAGCAGCAAAAG 254 Query 19103 CAACTAGTCTTTCTCCATAACTAGCATCATTATTATGAATCCATTTCAGTGCCCAATCAG 19162 |||| | |||||| ||||| | |||| | | | ||||| || |||||||| || | Sbjct 253 CAACCACTCTTTCACCATAGGTGGCATTGTCAGAGTTGATCCAGTTGAGTGCCCAGTCGG 194 Query 19163 CCTTCTTTTTTACACATGGCATTGTCTCTATAGAATTAAATAGATA 19208 |||||| ||| || ||||| || || || | ||| ||||| || Sbjct 193 CCTTCTGTTTGACTGGCGGCATGGTTTCAATTGCATTGAATAGGTA 148 >seq3830724 Length=343 Score = 111 bits (122), Expect = 2e-19 Identities = 118/156 (76%), Gaps = 0/156 (0%) Strand=Plus/Plus Query 18936 GTATAGAAGATGTTTAAACATCAAACATGCAAAATCACAATGTAGTCCCTCGTCTCTACT 18995 || || ||||| | |||| |||||| ||||||||||| || | || ||||| | ||| Sbjct 184 GTGTACAAGATAGGTGAACAGCAAACAGGCAAAATCACAGTGCAACCCTTCGTCGCGACT 243 Query 18996 TATCAATTCATTAGAAAATGTTAAACCAGGCATCAGTCCTCttttttttAACCAGAATAT 19055 || | ||| || ||||| || || || ||||||| ||||| |||||| | ||| ||||| Sbjct 244 GATGAGTTCGTTGGAAAACGTCAATCCCGGCATCAATCCTCGTTTTTTCATCCACAATAT 303 Query 19056 AGAAGCAAATGATCCAGAAAAGAATATACCTTCTAC 19091 | || || || || ||||| |||| ||||||||| Sbjct 304 GGCGGCGAAAGAACCCGAAAAAAATACACCTTCTAC 339 >seq718041 Length=1499 Score = 96.9 bits (106), Expect = 4e-15 Identities = 148/209 (71%), Gaps = 4/209 (2%) Strand=Plus/Plus Query 48375 TATCTGGCAGTATTGTTATAAACTCTTAACATTGGGACAATACCATTTGATATACCATTG 48434 ||||| || || ||||| || || || |||||||| | | ||||||||| |||||||| Sbjct 392 TATCTTGCGGTGTTGTTGTATACCCTCAACATTGGTATTAAGCCATTTGATGTACCATTG 451 Query 48435 GTTCCCGAAATATAACTTCCACTAGCTCTTAT--ATTACTAATTGAAATACCTATACCAC 48492 || || | |||||| |||||| ||||| || | | ||||| |||| ||| | Sbjct 452 GTGCCAGCAATATAGCTTCCAGATGCTCTAATGCAGTGAACATTGAGG--CCTACACCCC 509 Query 48493 CTGCCATTTTAGATATTAGAGCACACCGTTTAAGGGTATCATAAATTCCTTCTATACTAT 48552 |||| | || || || || || ||| | || || || || || |||||||||||||| | Sbjct 510 CTGCTGTCTTTGAGATGAGGGCGCACTGCTTCAGTGTGTCGTAGATTCCTTCTATACTGT 569 Query 48553 CATCTATCATATTTAATAGAAAACAACTA 48581 | | ||| | | || ||||||||| Sbjct 570 CTGATGCCATGGTGAGCAGGAAACAACTA 598 >seq3772600 Length=295 Score = 95.1 bits (104), Expect = 1e-14 Identities = 112/152 (74%), Gaps = 0/152 (0%) Strand=Plus/Minus Query 19036 CttttttttAACCAGAATATAGAAGCAAATGATCCAGAAAAGAATATACCTTCTACTGCT 19095 |||||||| | ||| || || | ||||| || || || ||||| || || ||||||||| Sbjct 229 CTTTTTTTCAGCCAAAAGATGGCTGCAAAGGACCCCGAGAAGAAGATGCCCTCTACTGCT 170 Query 19096 GCAAAAGCAACTAGTCTTTCTCCATAACTAGCATCATTATTATGAATCCATTTCAGTGCC 19155 ||||| || || |||| || ||| | | ||||| ||| | |||||||| | |||| Sbjct 169 GCAAACGCCACAAGTCGCTCACCAAACGTTGCATCCTTAGCACCTATCCATTTTATTGCC 110 Query 19156 CAATCAGCCTTCTTTTTTACACATGGCATTGT 19187 || || || || ||||| ||||| || | ||| Sbjct 109 CAGTCTGCTTTTTTTTTCACACACGGTACTGT 78 >seq3878943 Length=409 Score = 89.7 bits (98), Expect = 5e-13 Identities = 112/154 (73%), Gaps = 0/154 (0%) Strand=Plus/Minus Query 18960 ACATGCAAAATCACAATGTAGTCCCTCGTCTCTACTTATCAATTCATTAGAAAATGTTAA 19019 ||| ||||| || || || | ||||||||||| || | ||||| ||||| || Sbjct 256 ACAGGCAAAGTCGCAGTGCATGCCCTCGTCTCTGGAAATAAGCTCATTGAAAAATAATAC 197 Query 19020 ACCAGGCATCAGTCCTCttttttttAACCAGAATATAGAAGCAAATGATCCAGAAAAGAA 19079 ||| ||||| || || | ||| || | ||||| ||| | |||| ||| |||||||| Sbjct 196 ACCTGGCATAAGACCGCGTTTCTTGAGCCAGACTATCGCCGCAAGGCTTCCGGAAAAGAA 137 Query 19080 TATACCTTCTACTGCTGCAAAAGCAACTAGTCTT 19113 ||||||||||| | ||||| ||||| |||||| Sbjct 136 AATACCTTCTACGGGGGCAAAGGCAACCAGTCTT 103 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 534226222086480