Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ophionereis_20fasciata_20[genbank_20GCA_5F900067615.1_202017-02-27] 3,968,282 sequences; 1,184,528,790 total letters Query= NC_016656.1 Length=45890 Score E Sequences producing significant alignments: (Bits) Value seq577692 284 3e-72 seq3816217 183 8e-42 seq3509123 82.4 2e-11 >seq577692 Length=2825 Score = 284 bits (314), Expect = 3e-72 Identities = 498/714 (70%), Gaps = 12/714 (2%) Strand=Plus/Plus Query 25792 TTGGGAGAGGTTTTGTGAGTGGGTTACAAGTACTGAGAACCGTCTCTATGTGGGATGGTT 25851 |||||| |||||| ||||| ||| ||| | ||||| || ||||| || ||||| Sbjct 164 TTGGGAACAGTTTTGCACTTGGGTAACATCTACCAATAACCGCCTTTATGTAGGTTGGTT 223 Query 25852 CGGGGTGCTTATGATACCCTGCTTACTCGCAGCCACTACATGTTTTATACTTGCCTTCAT 25911 || | | ||||| || ||| || | ||||| | |||||| | | || || | Sbjct 224 TGGTATTGTGATGATCCCTACCTTGCTAACTGCCACCATCTGTTTTGTGTTAGCTTTTGT 283 Query 25912 CGCAGCACCGCCTGTAGATATAGATGGCATACGTGAGCCAGTTTCCGGCTCGTTAATGTA 25971 || ||||| ||||| ||||| || ||||| || || || |||||||| || | |||| Sbjct 284 AGCTGCACCTCCTGTGGATATTGACGGCATCCGCGAACCCGTTTCCGGTTCTCTGTTGTA 343 Query 25972 CGGAAACAATATAATATCAGGAGCAGTCGTCCCCTCCTCTAACGCAATCGGACTACATTT 26031 ||| || || || || | | || || || ||| ||||| || || || | || || Sbjct 344 CGGCAATAACATCATCACCGCCGCTGTTGTACCCAGTTCTAATGCGATTGGGTTGCACTT 403 Query 26032 TTACCCGATCTGGGAAGCTGGCACAC-TGGACGAGTGGCTATACAATGGCGGACCATATC 26090 ||| || ||||||||||| |||| | | || || ||||| || || ||||| || || | Sbjct 404 TTATCCCATCTGGGAAGC-GGCAAATATTGATGAATGGCTTTATAACGGCGGCCCCTACC 462 Query 26091 AACTCATTATCTTCCACTTCTTAATAGG-AGTAGCAGC-ATATGCAGGGAGACAGTGGGA 26148 | | ||| | ||||||||| |||| || | | || ||||| || | ||||||| Sbjct 463 AGTTGATTGTTTTCCACTTCCTAATCGGCATTTTTTGCTATATG--GGTCGTGAGTGGGA 520 Query 26149 ACTATCTTACAGACTAGGAATGAGACCATGGATATTTGTTGCATATACAGCACCACTATC 26208 ||| ||||| | |||||||| | || ||||| |||||| |||| || || || | Sbjct 521 ACTGTCTTATCGGTTAGGAATGCGTCCTTGGATTGCTGTTGCTTATAGCGCTCCTGTAGC 580 Query 26209 CGCAGCTCTCGCAGTGTTCTTAGTTTATCCTTTCGGACAAGGGAGTTTTAGTGATGGAAT 26268 || || || || | ||||||||| || |||| ||||| |||| |||||| | Sbjct 581 TGCTGCGACGGCGGTACTGTTAGTTTATTCTATCGGTCAAGGTTCTTTTTCTGATGGTTT 640 Query 26269 GCCTCTTGGTATCTCTGGTACTTTTAACTTTATGTTCGTATTCCAAGCAGAACATAATAT 26328 || || || || ||||| || |||||||||||||| || | |||||||| |||||| | Sbjct 641 ACCGCTGGGGATTTCTGGCACATTTAACTTTATGTTAGTGCTGCAAGCAGAGCATAATGT 700 Query 26329 ACTCATGCACCCATTCCATATGGCTGGTGTTGCTGGGGTTTTCGGTGGAGCTCTTTTCGC 26388 | |||||||| ||||||||| || || ||||| || || ||||| ||||||||| | Sbjct 701 TTTAATGCACCCCTTCCATATGCTGGGAGTAGCTGGTGTCTTTGGTGGCGCTCTTTTCTC 760 Query 26389 TGCTATGCACGGAAGTTTGGTTACTTCCTCACTTATTGC-AGAAACGACAGAGGAAGTCT 26447 ||||||||||| | |||| || || || ||| | | ||||| || || || | Sbjct 761 AGCTATGCACGGTTCTCTGGTGACATCTTC-TTTAGTACGTGAAACCACTGA--AATTGA 817 Query 26448 CA--CAGAATTATGGCTATAAGTTTGGGCAAGATGAAGAGACATATAATATTGT 26499 | || || || ||| ||||| ||||| ||||| || ||||| ||||| Sbjct 818 AAGCCAAAACCGGGGTTATCGCTTTGGACAAGAAGAAGAAACTTATAACATTGT 871 >seq3816217 Length=329 Score = 183 bits (202), Expect = 8e-42 Identities = 240/330 (73%), Gaps = 2/330 (1%) Strand=Plus/Plus Query 26309 TTCCAAGCAGAACATAATATACTCATGCACCCATTCCATATGGCTGGTGTTGCTGGGGTT 26368 |||||||||||||| || || || |||||||| ||||||||| || |||||||| || Sbjct 1 TTCCAAGCAGAACACAACATCCTGATGCACCCCTTCCATATGTTGGGAGTTGCTGGTGTA 60 Query 26369 TTCGGTGGAGCTCTTTTCGCTGCTATGCACGGAAGTTTGGTTACTTCCTCACTTATTGC- 26427 |||||||| ||| | ||| | || |||||||| |||||| ||||| || ||| ||| Sbjct 61 TTCGGTGGTGCTTTGTTCTCCGCGATGCACGGTTCTTTGGTAACTTCTTC-CTTGGTGCG 119 Query 26428 AGAAACGACAGAGGAAGTCTCACAGAATTATGGCTATAAGTTTGGGCAAGATGAAGAGAC 26487 ||||| || || | || || || || || || || || || ||||| ||||| || Sbjct 120 TGAAACCACCGAAATCGAATCTCAAAACTACGGTTACAAATTCGGTCAAGAAGAAGAAAC 179 Query 26488 ATATAATATTGTCGCTGCACACGGGTACTTTGGGAGATTAATTTTTCAGTATGCGAGTTT 26547 || || ||||| || || ||||| ||||| || | | || || || ||||| ||| Sbjct 180 CTACAACATTGTGGCAGCTCACGGTTACTTCGGTCGCCTGATCTTCCAATATGCTTCTTT 239 Query 26548 TAATAACAGCCGTTCTCTTCATTTCTTTCTTGCTACTTGGCCGGTTGTTGGCATATGGCT 26607 || ||||||||||| || || ||||| | | | |||||||||| | ||||| ||| | Sbjct 240 CAACAACAGCCGTTCCCTGCACTTCTTCTTGGGTGCTTGGCCGGTAATCGGCATCTGGTT 299 Query 26608 GACATCTATGGGTATCTGCACAATGGCATT 26637 || || | ||| | | ||| ||||| || Sbjct 300 CACCGCTTTAGGTGTATCCACCATGGCCTT 329 >seq3509123 Length=199 Score = 82.4 bits (90), Expect = 2e-11 Identities = 77/98 (79%), Gaps = 0/98 (0%) Strand=Plus/Plus Query 26699 ACATGGGCTGATGTATTAAACCGAGCTAACCTCGGCTTTGAAGTTATGCACGAGCGTAAT 26758 || ||||||||||| | ||||| |||||||| || | ||||| ||||||||||| || Sbjct 55 ACCTGGGCTGATGTCATCAACCGCGCTAACCTGGGTATGGAAGTAATGCACGAGCGCAAC 114 Query 26759 GCTCATAACTTTCCACTTGACTTAGCATCATCTGAGTC 26796 ||||| ||||| || | || ||||| || ||||||| Sbjct 115 GCTCACAACTTCCCCTTAGATTTAGCTTCTGCTGAGTC 152 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 139812160681968